Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 5.2e-87 324.3 160 100.0
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 2.9e-53 212.2 165 67.3
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 4.3e-49 198.4 158 65.8
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 1.4e-47 193.4 165 59.4
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 2.0e-46 189.5 166 56.6
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 4.9e-45 184.9 164 60.4
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 1.9e-44 183.0 164 57.3
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 5.4e-44 181.4 166 56.0
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 7.1e-44 181.0 162 59.3
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 1.6e-43 179.9 163 59.5
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 3.5e-43 178.7 165 59.4
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 6.0e-43 177.9 162 58.0
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.3e-42 176.8 162 58.0
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.3e-42 176.8 166 57.8
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 3.9e-42 175.3 155 59.4
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 6.6e-42 174.5 173 55.5
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 1.5e-41 173.3 162 56.8
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 2.5e-41 172.6 172 55.2
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 3.3e-41 172.2 151 61.6
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 5.6e-41 171.4 166 54.8
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 9.6e-41 170.6 169 55.0
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 3.6e-40 168.7 153 57.5
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 8.1e-40 167.5 156 56.4
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 1.1e-39 167.2 172 55.2
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 2.4e-39 166.0 167 53.3
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 5.3e-39 164.9 167 53.9
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.5e-38 163.3 167 53.3
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.0e-38 162.9 167 52.7
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 2.6e-38 162.5 151 56.3
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 7.6e-38 161.0 169 55.0
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 2.9e-37 159.1 168 51.8
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 3.8e-37 158.7 151 57.0
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 1.4e-36 156.8 170 51.2
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.9e-36 156.4 175 50.9
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 2.4e-36 156.0 166 53.0
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 3.2e-36 155.6 151 56.3
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 4.2e-36 155.2 165 53.3
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 5.4e-36 154.8 151 58.3
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 7.1e-36 154.5 160 56.2
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 7.1e-36 154.5 172 50.6
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 1.2e-35 153.7 169 50.3
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 1.2e-35 153.7 154 56.5
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 1.6e-35 153.3 127 64.6
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 4.6e-35 151.8 166 53.0
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.0e-34 150.6 175 49.7
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 6.6e-34 147.9 165 50.3
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 6.6e-34 147.9 149 58.4
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 8.7e-34 147.5 160 49.4
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 2.5e-33 146.0 151 54.3
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.5e-33 146.0 165 51.5
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 9.6e-33 144.1 162 49.4
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 9.6e-33 144.1 160 50.6
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 2.8e-32 142.5 129 56.6
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 6.2e-32 141.4 149 49.7
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 1.4e-31 140.2 159 50.3
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 1.4e-31 140.2 162 49.4
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 3.1e-31 139.0 121 57.9
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 4.0e-31 138.7 133 58.6
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 2.0e-30 136.3 131 55.7
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 5.8e-30 134.8 173 49.7
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 6.4e-29 131.3 154 48.7
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 6.4e-29 131.3 192 43.2
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 1.4e-28 130.2 149 49.7
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 2.4e-28 129.4 131 52.7
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 3.0e-26 122.5 128 50.8
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 3.7e-24 115.5 122 50.0
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 4.8e-24 115.2 134 50.0
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 2.4e-23 112.8 165 44.2
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 1.5e-22 110.2 169 45.0
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 7.6e-22 107.8 111 50.5
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 1.3e-21 107.1 132 47.0
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 1.7e-21 106.7 132 47.7
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 1.7e-21 106.7 132 47.7
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.4e-20 103.6 93 58.1
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 9.3e-20 100.9 109 55.0
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 5.1e-18 95.1 165 38.2
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 6.7e-18 94.7 123 44.7
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 4.3e-17 92.0 126 45.2
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 1.3e-16 90.5 107 49.5
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 6.2e-16 88.2 126 44.4
Medtr8g078730 Medicago truncatula HOM05D007898 ORTHO05D010010 6.9e-07 58.2 133 30.8


User provided reference genes

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