Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0199 Punica granatum HOM05D006482 ORTHO05D008149 3.7e-32 141.0 73 100.0
FvH4_7g32700 Fragaria vesca HOM05D006482 ORTHO05D008149 9.8e-25 116.3 73 76.7
FAN01G3112 Fragaria x ananassa HOM05D006482 ORTHO05D008149 9.8e-25 116.3 73 76.7
FAN03G2872 Fragaria x ananassa HOM05D006482 ORTHO05D008149 9.8e-25 116.3 73 76.7
CANSAT21G0227 Cannabis sativa HOM05D006482 ORTHO05D008149 1.3e-24 115.9 73 78.1
Eucgr.K00422 Eucalyptus grandis HOM05D006482 ORTHO05D008149 1.7e-24 115.5 73 83.6
Prupe.2G317400 Prunus persica HOM05D006482 ORTHO05D008149 2.8e-24 114.8 73 76.7
RcHm_v2.0_Chr1g0382671 Rosa chinensis HOM05D006482 ORTHO05D008149 2.8e-24 114.8 73 78.1
GSVIVG01038627001 Vitis vinifera HOM05D006482 ORTHO05D008149 2.8e-24 114.8 73 79.5
MD01G1227400 Malus domestica HOM05D006482 ORTHO05D008149 4.9e-24 114.0 73 78.1
Manes.01G041500 Manihot esculenta HOM05D006482 ORTHO05D008149 1.1e-23 112.8 73 76.7
Atru.chr12.2369 Acer truncatum HOM05D006482 ORTHO05D008149 1.2e-22 109.4 73 75.3
TAR374G1512 Trochodendron aralioides HOM05D006482 ORTHO05D008149 1.6e-22 109.0 73 75.3
CSS0017170 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 2.0e-22 108.6 73 74.0
QL05p036199 Quercus lobata HOM05D006482 ORTHO05D008149 2.7e-22 108.2 72 75.0
C03p17520 Brassica napus HOM05D006482 ORTHO05D008149 4.5e-22 107.5 71 76.1
BolC3t14165H Brassica oleracea HOM05D006482 ORTHO05D008149 4.5e-22 107.5 71 76.1
BcaC01g06263 Brassica carinata HOM05D006482 ORTHO05D008149 7.7e-22 106.7 71 76.1
Rhsim03G0214200 Rhododendron simsii HOM05D006482 ORTHO05D008149 7.7e-22 106.7 73 71.2
TWI14G0741 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 7.7e-22 106.7 70 72.9
Duzib205G0332 Durio zibethinus HOM05D006482 ORTHO05D008149 1.3e-21 105.9 73 74.0
Potri.012G022900 Populus trichocarpa HOM05D006482 ORTHO05D008149 1.3e-21 105.9 73 71.2
Gohir.A08G103900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 1.7e-21 105.5 73 72.6
Lj1g0026941 Lotus japonicus HOM05D006482 ORTHO05D008149 1.7e-21 105.5 73 74.0
TWI39G0373 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 2.3e-21 105.1 73 69.9
Ciclev10023193m.g Citrus clementina HOM05D006482 ORTHO05D008149 3.8e-21 104.4 73 72.6
A03p15030 Brassica napus HOM05D006482 ORTHO05D008149 5.0e-21 104.0 71 74.6
BraA03t10797Z Brassica rapa HOM05D006482 ORTHO05D008149 5.0e-21 104.0 71 74.6
Carub.0008s1398 Capsella rubella HOM05D006482 ORTHO05D008149 5.0e-21 104.0 73 72.6
Gohir.D08G115300 Gossypium hirsutum HOM05D006482 ORTHO05D008149 5.0e-21 104.0 73 71.2
Gorai.004G124200 Gossypium raimondii HOM05D006482 ORTHO05D008149 5.0e-21 104.0 73 71.2
AL8G28600 Arabidopsis lyrata HOM05D006482 ORTHO05D008149 6.6e-21 103.6 73 72.6
COL.COLO4_14353 Corchorus olitorius HOM05D006482 ORTHO05D008149 6.6e-21 103.6 73 68.5
Potri.015G006500 Populus trichocarpa HOM05D006482 ORTHO05D008149 8.6e-21 103.2 73 69.9
Thecc.03G206900 Theobroma cacao HOM05D006482 ORTHO05D008149 8.6e-21 103.2 73 68.5
Dinv29224 Davidia involucrata HOM05D006482 ORTHO05D008149 1.1e-20 102.8 65 75.4
Thhalv10015198m.g Eutrema salsugineum HOM05D006482 ORTHO05D008149 1.1e-20 102.8 73 71.2
Lalb_Chr11g0067291 Lupinus albus HOM05D006482 ORTHO05D008149 1.1e-20 102.8 72 70.8
Phvul.009G047100 Phaseolus vulgaris HOM05D006482 ORTHO05D008149 1.1e-20 102.8 73 72.6
Sp6g15770 Schrenkiella parvula HOM05D006482 ORTHO05D008149 1.1e-20 102.8 73 71.2
AT5G53650 Arabidopsis thaliana HOM05D006482 ORTHO05D008149 1.5e-20 102.4 73 71.2
THA.LOC109117152 Tarenaya hassleriana HOM05D006482 ORTHO05D008149 1.5e-20 102.4 69 73.9
arahy.Tifrunner.gnm1.ann1.ZIU4UI Arachis hypogaea HOM05D006482 ORTHO05D008149 1.9e-20 102.1 73 69.9
A02p10930 Brassica napus HOM05D006482 ORTHO05D008149 1.9e-20 102.1 71 71.8
Lalb_Chr23g0271851 Lupinus albus HOM05D006482 ORTHO05D008149 2.5e-20 101.7 73 71.2
PSO063G1999 Papaver somniferum HOM05D006482 ORTHO05D008149 2.5e-20 101.7 73 67.1
Psat5g073480 Pisum sativum HOM05D006482 ORTHO05D008149 2.5e-20 101.7 73 71.2
Sabra15G0004500 Salix brachista HOM05D006482 ORTHO05D008149 2.5e-20 101.7 73 68.5
Sed0025475 Sechium edule HOM05D006482 ORTHO05D008149 3.3e-20 101.3 73 68.5
Aa31LG3G9780 Aethionema arabicum HOM05D006482 ORTHO05D008149 4.2e-20 100.9 73 69.9
BcaB01g04252 Brassica carinata HOM05D006482 ORTHO05D008149 4.2e-20 100.9 71 71.8
arahy.Tifrunner.gnm1.ann1.CVH3M3 Arachis hypogaea HOM05D006482 ORTHO05D008149 7.2e-20 100.1 73 68.5
BraA02t06158Z Brassica rapa HOM05D006482 ORTHO05D008149 7.2e-20 100.1 71 70.4
CARHR266810 Cardamine hirsuta HOM05D006482 ORTHO05D008149 7.2e-20 100.1 73 68.5
Hma1.2p1_0456F.1_g156710 Hydrangea macrophylla HOM05D006482 ORTHO05D008149 7.2e-20 100.1 73 71.2
Medtr3g092270 Medicago truncatula HOM05D006482 ORTHO05D008149 7.2e-20 100.1 66 75.8
TAR629G1047 Trochodendron aralioides HOM05D006482 ORTHO05D008149 7.2e-20 100.1 73 69.9
vmacro06428 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 7.2e-20 100.1 73 69.9
Dinv18742 Davidia involucrata HOM05D006482 ORTHO05D008149 9.5e-20 99.8 66 71.2
EL10Ac3g05199 Beta vulgaris HOM05D006482 ORTHO05D008149 1.2e-19 99.4 73 69.9
Gorai.008G265700 Gossypium raimondii HOM05D006482 ORTHO05D008149 1.2e-19 99.4 73 68.5
Glyma.04G230700 Glycine max HOM05D006482 ORTHO05D008149 2.1e-19 98.6 73 67.1
MD07G1297700 Malus domestica HOM05D006482 ORTHO05D008149 2.1e-19 98.6 99 56.6
Nn3g18841 Nelumbo nucifera HOM05D006482 ORTHO05D008149 2.1e-19 98.6 73 69.9
Hund21041 Selenicereus undatus HOM05D006482 ORTHO05D008149 2.1e-19 98.6 66 75.8
Actinidia27284 Actinidia chinensis HOM05D000567 ORTHO05D000767 3.6e-19 97.8 73 68.5
BcaB05g22064 Brassica carinata HOM05D006482 ORTHO05D008149 3.6e-19 97.8 66 74.2
CiPaw.05G203100 Carya illinoinensis HOM05D006482 ORTHO05D008149 3.6e-19 97.8 73 67.1
Ah.13g070630 Amaranthus hybridus HOM05D006482 ORTHO05D008149 4.7e-19 97.4 74 70.3
BcaC03g14399 Brassica carinata HOM05D006482 ORTHO05D008149 4.7e-19 97.4 71 67.6
C02p18140 Brassica napus HOM05D006482 ORTHO05D008149 4.7e-19 97.4 71 67.6
BolC2t07944H Brassica oleracea HOM05D006482 ORTHO05D008149 4.7e-19 97.4 71 67.6
TPR.G14847 Trifolium pratense HOM05D006482 ORTHO05D008149 6.1e-19 97.1 65 73.8
Sc19g0000660 Simmondsia chinensis HOM05D006482 ORTHO05D008149 8.0e-19 96.7 63 77.8
Duzib068G1219 Durio zibethinus HOM05D006482 ORTHO05D008149 1.4e-18 95.9 88 60.2
Gohir.A12G246900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 1.4e-18 95.9 73 65.8
Hund09702 Selenicereus undatus HOM05D006482 ORTHO05D008149 1.4e-18 95.9 73 67.1
MELO3C005924.2 Cucumis melo HOM05D006482 ORTHO05D008149 1.8e-18 95.5 73 65.8
CsaV3_5G000030 Cucumis sativus L. HOM05D006482 ORTHO05D008149 2.3e-18 95.1 73 65.8
ECA233G2670 Erigeron canadensis HOM05D006482 ORTHO05D008149 6.8e-18 93.6 73 64.4
CSS0001288 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 8.9e-18 93.2 73 67.1
Sc13g0010170 Simmondsia chinensis HOM05D006482 ORTHO05D008149 8.9e-18 93.2 73 63.0
Nitab4.5_0008141g0050 Nicotiana tabacum HOM05D006482 ORTHO05D008149 1.5e-17 92.4 72 62.5
CiPaw.06G042200 Carya illinoinensis HOM05D006482 ORTHO05D008149 2.0e-17 92.0 73 60.3
Oeu010737.1 Olea europaea HOM05D006482 ORTHO05D008149 2.0e-17 92.0 73 61.6
Glyma.04G154600 Glycine max HOM05D006482 ORTHO05D008149 3.4e-17 91.3 69 66.7
ClCG01G000130 Citrullus lanatus HOM05D006482 ORTHO05D008149 7.5e-17 90.1 73 60.3
CSS0049934 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 9.8e-17 89.7 73 65.8
CDE09G1364 Ceratophyllum demersum HOM05D001294 ORTHO05D001178 1.3e-16 89.4 71 62.0
Nitab4.5_0002720g0020 Nicotiana tabacum HOM05D006482 ORTHO05D008149 1.7e-16 89.0 71 60.6
Solyc08g083200.3 Solanum lycopersicum HOM05D006482 ORTHO05D008149 1.7e-16 89.0 73 60.3
Sopen08g031390 Solanum pennellii HOM05D006482 ORTHO05D008149 1.7e-16 89.0 73 60.3
PGSC0003DMG400012236 Solanum tuberosum HOM05D006482 ORTHO05D008149 2.2e-16 88.6 73 61.6
Lsat_1_v5_gn_6_10060 Lactuca sativa HOM05D006482 ORTHO05D008149 2.8e-16 88.2 73 64.4
Glyma.06G134500 Glycine max HOM05D006482 ORTHO05D008149 3.7e-16 87.8 73 61.6
HanXRQChr07g0192381 Helianthus annuus HOM05D006482 ORTHO05D008149 3.7e-16 87.8 73 63.0
Sed0001965 Sechium edule HOM05D006482 ORTHO05D008149 1.4e-15 85.9 66 63.6
SalBow3G2365 Salvia bowleyana HOM05D006482 ORTHO05D008149 1.8e-15 85.5 65 64.6
AUR62035606 Chenopodium quinoa HOM05D006482 ORTHO05D008149 5.4e-15 84.0 96 54.2
Duzib084G1447 Durio zibethinus HOM05D006482 ORTHO05D008149 2.0e-14 82.0 61 67.2
Migut.E00300 Erythranthe guttata HOM05D006482 ORTHO05D008149 2.7e-14 81.6 74 59.5
Gohir.D12G247600 Gossypium hirsutum HOM05D006482 ORTHO05D008149 3.5e-14 81.3 73 63.0
Peaxi162Scf00074g00224 Petunia axillaris HOM05D006482 ORTHO05D008149 7.8e-14 80.1 73 57.5
Eucgr.E02459 Eucalyptus grandis HOM05D006482 ORTHO05D008149 1.7e-13 79.0 55 74.5
Sabra12G0010900 Salix brachista HOM05D006482 ORTHO05D008149 3.9e-13 77.8 132 38.6
QL09p007382 Quercus lobata HOM05D006482 ORTHO05D008149 6.6e-13 77.0 142 38.0
FAN17G0467 Fragaria x ananassa HOM05D006482 ORTHO05D008149 1.9e-12 75.5 43 79.1
unitig_699.g19497 Utricularia gibba HOM05D006482 ORTHO05D008149 1.9e-12 75.5 69 56.5
CSS0007382 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 9.5e-12 73.2 70 57.1
Cc08_g16820 Coffea canephora HOM05D006482 ORTHO05D008149 1.6e-11 72.4 69 53.6
SEGI_31465 Sequoiadendron giganteum HOM05D006482 ORTHO05D008149 2.1e-11 72.0 73 54.8
HPP92_020659 Vanilla planifolia HOM05D001695 ORTHO05D002735 2.8e-11 71.6 79 50.6
CSS0015195 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 4.7e-11 70.9 67 55.2
CSS0018303 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 6.1e-11 70.5 43 76.7
CDE11G0870 Ceratophyllum demersum HOM05D006482 ORTHO05D008149 1.0e-10 69.7 105 40.0
Os05g0535700 Oryza sativa ssp. japonica HOM05D006482 ORTHO05D008149 3.1e-10 68.2 71 50.7
Haze_00279 Corylus avellana HOM05D006482 ORTHO05D008149 8.9e-10 66.6 41 73.2
ATR0579G147 Amborella trichopoda HOM05D006482 ORTHO05D008149 1.5e-09 65.9 42 69.0
DCAR_006554 Daucus carota HOM05D006482 ORTHO05D008149 2.0e-09 65.5 41 75.6
vmacro13845 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 3.4e-09 64.7 45 68.9
AUR62006020 Chenopodium quinoa HOM05D006482 ORTHO05D008149 4.4e-09 64.3 42 73.8
FvH4_4g29090 Fragaria vesca HOM05D000768 ORTHO05D046510 4.4e-09 64.3 48 68.8
Rhsim07G0077300 Rhododendron simsii HOM05D006482 ORTHO05D008149 7.5e-09 63.5 42 71.4
FAN22G1213 Fragaria x ananassa HOM05D034724 ORTHO05D202753 1.1e-07 59.7 53 56.6
Zm00001eb294050 Zea mays HOM05D006482 ORTHO05D008149 9.2e-07 56.6 72 44.4


User provided reference genes

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