Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 0.0e+00 1293.9 671 100.0
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 1.8e-194 683.3 679 58.3
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 7.7e-193 677.9 638 59.4
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 5.0e-192 675.2 656 61.3
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 7.5e-188 661.4 649 58.6
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 9.8e-188 661.0 683 57.8
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 9.8e-188 661.0 679 57.1
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.7e-187 660.2 649 58.4
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 1.8e-186 656.8 648 58.6
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 5.4e-186 655.2 655 58.5
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 5.4e-186 655.2 667 57.9
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 2.0e-185 653.3 689 56.2
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 4.5e-185 652.1 660 58.3
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 7.8e-185 651.4 659 57.8
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 2.9e-184 649.4 651 58.8
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 5.0e-184 648.7 699 56.5
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 1.1e-183 647.5 652 58.4
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 3.3e-183 646.0 699 56.4
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 6.1e-182 641.7 635 58.4
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 8.0e-182 641.3 692 56.6
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 8.0e-182 641.3 692 56.6
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 8.0e-182 641.3 682 57.5
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 4.0e-181 639.0 671 56.0
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 1.7e-179 633.6 644 57.0
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 2.4e-178 629.8 690 56.4
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.3e-176 624.0 698 54.0
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.3e-176 624.0 660 56.1
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 1.7e-176 623.6 677 56.1
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 8.0e-174 614.8 677 55.1
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 2.6e-172 609.8 684 54.8
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 5.8e-172 608.6 685 53.7
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 2.9e-171 606.3 692 53.2
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 1.9e-170 603.6 706 53.4
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 4.1e-170 602.4 642 55.1
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 7.8e-169 598.2 647 55.2
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 5.1e-168 595.5 662 54.5
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 8.1e-166 588.2 691 53.5
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 2.6e-164 583.2 665 53.1
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 9.9e-164 581.3 672 52.4
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 3.2e-162 576.2 683 52.6
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 7.8e-161 571.6 662 52.0
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 5.1e-160 568.9 688 53.2
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 5.1e-160 568.9 682 51.8
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 5.1e-160 568.9 656 55.8
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 3.3e-159 566.2 596 54.9
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 8.1e-158 561.6 648 53.7
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.1e-157 561.2 606 54.8
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 8.9e-157 558.1 671 51.4
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 3.4e-156 556.2 699 51.1
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 3.8e-155 552.7 644 51.1
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 4.9e-155 552.4 646 51.2
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 8.4e-155 551.6 643 51.2
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 3.2e-154 549.7 643 51.2
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.0e-152 544.7 691 50.2
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 1.3e-152 544.3 655 50.8
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 1.6e-150 537.3 692 49.6
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 2.8e-150 536.6 684 49.4
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 8.1e-150 535.0 612 52.1
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 1.4e-149 534.3 660 52.4
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 1.8e-149 533.9 732 46.9
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 1.2e-148 531.2 669 49.8
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 2.6e-148 530.0 653 49.5
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 1.3e-147 527.7 705 48.8
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.9e-147 526.6 651 50.2
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 2.5e-143 513.5 609 50.7
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.6e-142 510.8 673 48.3
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 6.2e-142 508.8 674 47.8
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 1.5e-140 504.2 642 49.8
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 1.5e-140 504.2 713 46.7
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 8.4e-139 498.4 632 49.2
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 9.3e-138 495.0 753 44.0
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 3.3e-135 486.5 645 48.2
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 7.4e-135 485.3 678 46.8
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 3.7e-134 483.0 614 48.7
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 6.2e-134 482.3 532 53.6
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 4.0e-133 479.6 664 49.7
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 6.9e-133 478.8 684 46.5
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 1.2e-132 478.0 614 48.2
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 1.5e-132 477.6 535 54.6
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 2.6e-132 476.9 660 46.4
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 1.7e-131 474.2 649 46.4
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 9.3e-130 468.4 579 48.5
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 3.0e-128 463.4 673 45.9
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 3.0e-128 463.4 542 53.3
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 3.9e-128 463.0 597 49.2
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 8.4e-123 445.3 691 44.4
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.5e-119 434.5 582 46.6
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 1.9e-119 434.1 680 44.6
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 4.8e-118 429.5 621 43.2
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 6.5e-115 419.1 709 41.9
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 2.7e-113 413.7 673 44.4
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 1.5e-111 407.9 564 47.0
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 3.3e-111 406.8 626 44.1
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 9.7e-111 405.2 665 43.5
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 5.3e-109 399.4 625 44.5
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 1.5e-108 397.9 667 42.7
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 6.5e-107 392.5 666 42.5
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 6.1e-105 386.0 661 41.6
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 1.4e-104 384.8 503 47.9
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 3.9e-104 383.3 665 42.1
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 3.9e-104 383.3 665 42.1
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 8.8e-104 382.1 644 43.3
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 8.2e-102 375.6 523 46.3
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 3.8e-99 366.7 453 51.2
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 1.5e-98 364.8 729 37.9
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 2.5e-98 364.0 585 42.4
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 1.6e-92 344.7 552 44.0
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 1.0e-91 342.0 543 44.6
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 7.2e-90 335.9 669 39.6
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 6.1e-89 332.8 484 47.5
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 5.7e-87 326.2 501 44.5
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.6e-84 318.2 278 61.5
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 1.0e-72 278.9 206 69.4
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 8.9e-72 275.8 269 58.4
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 8.3e-70 269.2 589 38.7
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 4.5e-68 263.5 519 38.5
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 2.9e-67 260.8 527 37.2
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 2.0e-60 238.0 202 57.4
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 2.5e-50 204.5 149 72.5
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 4.3e-50 203.8 264 44.7
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 9.5e-50 202.6 216 48.1
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 1.1e-45 189.1 148 68.2
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 1.2e-44 185.7 241 41.9
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 7.8e-44 183.0 435 34.3
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 1.0e-43 182.6 283 43.5
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 1.2e-41 175.6 201 50.7
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 2.6e-39 167.9 122 66.4
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 1.3e-38 165.6 147 63.9
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 6.0e-36 156.8 140 59.3
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 1.7e-35 155.2 149 60.4
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 1.1e-34 152.5 414 33.6
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 1.1e-29 136.0 146 49.3
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 3.2e-29 134.4 193 44.6
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 1.0e-27 129.4 127 54.3
Haze_17183 Corylus avellana HOM05D004806 ORTHO05D005397 5.6e-26 123.6 86 73.3
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 4.5e-23 114.0 125 51.2
Os07g0100500 Oryza sativa ssp. japonica HOM05D004806 ORTHO05D005397 9.9e-23 112.8 74 66.2
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 1.5e-18 99.0 424 28.5
SalBow6G4818 Salvia bowleyana HOM05D004806 ORTHO05D005397 1.4e-16 92.4 106 53.8
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 5.8e-15 87.0 73 57.5
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 1.7e-14 85.5 72 59.7
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 2.2e-14 85.1 62 67.7
Oeu043075.1 Olea europaea HOM05D004806 ORTHO05D005397 3.2e-13 81.3 111 48.6
CAN.G853.43 Capsicum annuum HOM05D004806 ORTHO05D005397 1.0e-11 76.3 48 75.0
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 1.3e-11 75.9 126 36.5
Ah.05g175410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 1.8e-08 65.5 55 60.0
Oeu021121.1 Olea europaea HOM05D004806 ORTHO05D005397 2.4e-08 65.1 42 69.0
Oeu061605.1 Olea europaea HOM05D004806 ORTHO05D005397 9.0e-08 63.2 55 52.7
SalBow2G3552 Salvia bowleyana HOM05D034888 ORTHO05D005397 5.0e-06 57.4 43 62.8
MD12G1168400 Malus domestica HOM05D004806 ORTHO05D005397 6.5e-06 57.0 27 92.6


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