Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 9.6e-161 570.1 282 100.0
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 9.6e-161 570.1 282 100.0
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 4.1e-103 378.6 281 70.1
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 2.6e-102 375.9 283 68.6
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 2.6e-102 375.9 284 68.3
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 7.7e-102 374.4 280 67.5
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 4.2e-100 368.6 281 68.0
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 9.4e-100 367.5 281 66.5
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 1.6e-99 366.7 279 66.7
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 8.0e-99 364.4 281 66.5
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 8.0e-99 364.4 282 66.0
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 5.2e-98 361.7 281 67.6
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 1.1e-97 360.5 281 65.1
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 1.5e-97 360.1 279 65.9
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 1.5e-97 360.1 281 64.1
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 7.4e-97 357.8 283 66.1
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 1.3e-96 357.1 282 65.6
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 3.7e-96 355.5 283 66.1
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 6.3e-96 354.8 282 64.5
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 8.2e-96 354.4 280 66.4
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 1.1e-95 354.0 283 64.0
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 3.1e-95 352.4 281 65.8
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 3.1e-95 352.4 282 64.5
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 3.1e-95 352.4 282 64.5
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 2.0e-94 349.7 279 64.9
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 7.7e-94 347.8 281 64.4
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 1.0e-93 347.4 281 64.1
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 2.2e-93 346.3 284 66.5
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 2.9e-93 345.9 282 63.8
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 3.8e-93 345.5 281 62.6
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 2.1e-91 339.7 282 60.6
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 1.4e-90 337.0 283 62.2
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 3.0e-90 335.9 280 62.5
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 3.0e-90 335.9 284 61.3
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 6.8e-90 334.7 280 61.8
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 1.2e-89 334.0 283 61.1
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 3.4e-89 332.4 280 61.1
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 3.4e-89 332.4 283 62.2
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 3.1e-87 325.9 283 60.4
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.2e-85 319.7 279 60.9
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 8.5e-85 317.8 285 57.2
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 4.2e-84 315.5 280 60.0
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 5.5e-84 315.1 284 58.8
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 1.2e-83 313.9 282 60.3
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 1.2e-83 313.9 277 59.6
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 4.7e-83 312.0 278 59.0
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 2.0e-81 306.6 263 61.2
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 2.0e-81 306.6 276 57.2
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 4.4e-81 305.4 279 59.1
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.4e-81 305.4 279 59.1
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 7.5e-81 304.7 285 56.8
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 2.2e-80 303.1 280 58.2
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 4.9e-80 302.0 280 57.9
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 7.0e-79 298.1 282 56.0
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 9.1e-79 297.7 282 55.7
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 2.7e-78 296.2 301 56.1
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 2.7e-78 296.2 277 55.2
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 3.5e-78 295.8 278 54.3
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 4.5e-78 295.4 278 55.0
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 7.7e-78 294.7 284 56.3
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 1.0e-77 294.3 281 56.9
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 1.5e-76 290.4 283 53.0
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 2.5e-76 289.7 236 64.0
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 2.1e-75 286.6 289 54.0
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 6.1e-75 285.0 282 57.1
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 1.4e-74 283.9 283 54.4
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 8.9e-74 281.2 300 52.0
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 7.0e-71 271.6 261 56.3
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 4.6e-70 268.9 280 54.3
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.7e-69 266.9 279 54.8
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 2.9e-69 266.2 247 57.5
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 8.6e-69 264.6 242 58.3
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 1.5e-68 263.8 253 58.1
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 4.4e-65 252.3 278 48.9
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.7e-64 250.4 235 58.7
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 1.9e-63 246.9 272 48.9
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 1.9e-63 246.9 290 45.9
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 5.4e-63 245.4 237 57.8
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 1.7e-61 240.4 301 45.2
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 1.9e-60 236.9 254 53.1
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 7.3e-60 235.0 289 46.0
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.2e-59 234.2 279 52.0
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 2.1e-59 233.4 275 46.9
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 6.2e-59 231.9 279 50.9
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 4.4e-57 225.7 232 52.6
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 4.0e-50 202.6 256 47.3
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 4.9e-48 195.7 295 44.7
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 9.2e-47 191.4 287 38.0
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 7.8e-46 188.3 299 37.8
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 2.5e-44 183.3 163 57.1
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 4.3e-44 182.6 139 64.0
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 7.3e-44 181.8 200 50.5
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 9.6e-44 181.4 198 49.5
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 1.2e-43 181.0 197 51.8
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 1.6e-43 180.6 174 54.6
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 2.1e-43 180.3 200 52.0
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 2.8e-43 179.9 241 45.6
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 1.8e-42 177.2 163 58.3
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 2.4e-42 176.8 163 58.3
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 2.4e-42 176.8 163 58.3
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 3.1e-42 176.4 200 52.0
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 8.9e-42 174.9 165 57.0
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 1.2e-41 174.5 197 51.3
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 2.0e-41 173.7 227 44.9
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 3.4e-41 172.9 252 44.4
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 4.4e-41 172.6 140 57.9
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 2.1e-38 163.7 110 73.6
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 5.6e-36 155.6 133 60.9
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 9.6e-36 154.8 182 50.0
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 1.1e-34 151.4 163 51.5
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.4e-33 146.0 211 46.4
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 1.3e-32 144.4 67 92.5
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 8.7e-29 131.7 91 69.2
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 2.9e-24 116.7 204 40.2
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 1.3e-16 91.3 209 35.9
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 1.1e-15 88.2 158 40.5
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 6.7e-13 79.0 79 51.9
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 1.3e-11 74.7 92 47.8
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 3.7e-11 73.2 47 68.1
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 2.4e-10 70.5 99 43.4
SalBow6G0039 Salvia bowleyana HOM05D006517 ORTHO05D007886 3.5e-06 56.6 26 88.5


User provided reference genes

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