Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 1.1e-170 603.2 292 100.0
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 7.8e-158 560.5 290 91.7
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 8.7e-157 557.0 292 91.1
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 5.6e-156 554.3 292 89.4
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 6.2e-155 550.8 292 89.0
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 2.4e-154 548.9 290 90.0
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 3.1e-154 548.5 292 88.7
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 4.0e-154 548.1 292 89.7
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 1.2e-153 546.6 292 88.7
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 1.5e-153 546.2 292 89.4
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 2.6e-153 545.4 292 90.4
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 2.9e-152 542.0 292 88.7
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 2.9e-152 542.0 292 87.7
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 6.4e-152 540.8 292 88.0
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 6.4e-152 540.8 292 88.4
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 1.1e-151 540.0 290 87.6
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 2.4e-151 538.9 292 88.0
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 2.4e-151 538.9 288 87.5
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 2.4e-151 538.9 292 87.7
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.2e-151 538.1 292 88.4
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.2e-151 538.1 292 88.0
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 4.2e-151 538.1 292 88.4
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 7.1e-151 537.3 321 80.7
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 9.3e-151 537.0 292 87.0
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 9.3e-151 537.0 290 88.6
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.2e-150 536.6 288 87.5
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 1.6e-150 536.2 288 87.2
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 7.9e-150 533.9 292 86.6
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.0e-149 533.5 292 87.3
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.0e-149 533.5 292 87.3
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 2.3e-149 532.3 292 88.0
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 5.1e-149 531.2 290 87.6
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 6.6e-149 530.8 292 87.3
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 6.6e-149 530.8 292 86.6
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 1.1e-148 530.0 292 86.0
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 1.9e-148 529.3 292 85.6
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 5.6e-148 527.7 292 85.6
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 5.6e-148 527.7 290 85.9
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 5.6e-148 527.7 288 85.4
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 5.6e-148 527.7 292 88.4
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 5.6e-148 527.7 292 86.0
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 7.4e-148 527.3 290 87.2
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 1.3e-147 526.6 292 86.0
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 1.6e-147 526.2 294 85.7
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 2.8e-147 525.4 289 86.5
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 1.1e-146 523.5 290 86.9
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 1.4e-146 523.1 280 87.9
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 1.8e-146 522.7 287 85.4
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 1.8e-146 522.7 287 85.4
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 2.4e-146 522.3 289 85.8
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 2.4e-146 522.3 292 85.6
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 9.0e-146 520.4 288 84.0
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 1.2e-145 520.0 290 84.1
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 1.2e-145 520.0 290 84.8
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 1.2e-145 520.0 290 85.2
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 1.5e-145 519.6 292 84.2
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.0e-145 519.2 289 85.8
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 3.4e-145 518.5 292 84.6
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 5.8e-145 517.7 290 83.4
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 5.8e-145 517.7 290 83.4
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 5.8e-145 517.7 288 83.7
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 9.9e-145 516.9 292 83.6
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 1.7e-144 516.2 292 82.9
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.9e-144 515.4 290 85.2
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 3.8e-144 515.0 292 82.5
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 4.9e-144 514.6 288 82.6
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 6.4e-144 514.2 292 85.3
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 1.1e-143 513.5 292 82.5
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 1.4e-143 513.1 292 82.2
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 1.4e-143 513.1 290 83.4
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 1.9e-143 512.7 292 82.5
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 2.4e-143 512.3 292 82.5
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 3.2e-143 511.9 290 84.5
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 3.2e-143 511.9 290 84.5
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 4.2e-143 511.5 292 82.5
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 5.5e-143 511.1 291 81.8
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 9.3e-143 510.4 292 82.9
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 9.3e-143 510.4 293 82.9
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 1.2e-142 510.0 290 84.5
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 2.1e-142 509.2 290 82.8
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 3.5e-142 508.4 288 84.7
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 4.6e-142 508.1 288 83.0
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 6.0e-142 507.7 292 81.8
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 1.8e-141 506.1 292 83.6
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 5.6e-140 501.1 271 89.3
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 1.3e-139 500.0 289 81.0
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.3e-139 500.0 287 83.3
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 2.1e-139 499.2 290 80.0
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 2.1e-139 499.2 290 80.0
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 2.8e-139 498.8 288 83.3
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 3.7e-139 498.4 292 81.8
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 3.7e-139 498.4 289 80.6
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 8.1e-139 497.3 288 80.2
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 8.1e-139 497.3 288 80.2
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.1e-138 496.9 278 85.3
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 3.1e-138 495.4 287 80.1
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 3.1e-138 495.4 274 85.8
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 9.0e-138 493.8 290 81.0
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 1.2e-137 493.4 287 81.2
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 1.5e-137 493.0 272 86.4
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 2.9e-136 488.8 289 81.0
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 5.5e-135 484.6 292 81.2
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 7.1e-135 484.2 289 78.9
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 1.6e-134 483.0 252 89.3
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 1.3e-133 479.9 313 77.6
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.5e-132 476.5 292 80.1
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 1.6e-131 473.0 294 75.9
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 3.1e-130 468.8 272 82.7
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.9e-127 459.5 292 77.1
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 5.7e-124 448.0 283 73.9
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 2.6e-121 439.1 309 68.6
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 4.5e-121 438.3 271 79.3
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 4.2e-119 431.8 286 70.3
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 7.2e-119 431.0 281 70.1
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 5.7e-116 421.4 273 71.4
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 3.1e-114 415.6 267 72.3
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 3.7e-107 392.1 281 64.1
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 4.7e-102 375.2 223 80.3
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.8e-98 363.2 321 61.1
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 1.2e-86 323.9 190 82.1
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.7e-86 322.8 183 85.2
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 3.1e-82 309.3 186 80.1
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 3.5e-81 305.8 285 51.9
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 4.5e-81 305.4 173 86.7
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 2.3e-80 303.1 294 53.1
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 5.6e-79 298.5 297 53.5
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 3.4e-76 289.3 188 72.9
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 5.4e-74 282.0 293 48.1
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 4.9e-59 232.3 312 44.2
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 1.3e-56 224.2 164 67.1
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.9e-56 222.6 224 56.2
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.1e-54 216.9 221 56.1
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 3.9e-48 196.1 106 86.8
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-45 188.0 101 89.1
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.8e-45 187.2 102 87.3
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-42 177.9 96 88.5
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 7.4e-31 138.7 77 85.7
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.9e-24 116.3 166 42.8
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.9e-23 114.0 96 64.6
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 5.5e-10 69.3 49 65.3
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 2.3e-08 63.9 40 80.0


User provided reference genes

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