Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 0.0e+00 1176.0 597 100.0
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 2.2e-271 938.7 592 79.9
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 1.1e-270 936.4 591 79.7
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 4.5e-269 931.0 593 79.1
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 5.9e-269 930.6 594 79.1
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 5.9e-269 930.6 591 78.8
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 1.7e-268 929.1 593 78.8
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 9.4e-267 923.3 591 78.5
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 9.4e-267 923.3 594 79.8
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 2.1e-266 922.2 595 78.8
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 2.7e-266 921.8 595 78.7
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 3.6e-266 921.4 592 78.7
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 5.2e-265 917.5 593 78.8
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 1.5e-264 916.0 592 77.4
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 2.0e-264 915.6 595 77.5
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 1.3e-263 912.9 599 77.5
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 2.8e-263 911.8 607 76.8
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 2.8e-263 911.8 596 76.8
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 2.4e-262 908.7 581 79.7
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 3.1e-262 908.3 598 78.1
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 4.1e-262 907.9 592 76.9
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 4.5e-261 904.4 593 77.6
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 1.3e-260 902.9 592 76.5
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 2.1e-258 895.6 592 76.0
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 2.1e-258 895.6 593 76.4
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 3.6e-258 894.8 592 77.2
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 1.0e-257 893.3 592 77.0
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 2.3e-257 892.1 596 75.5
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 1.2e-256 889.8 596 74.5
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.2e-256 889.8 577 78.5
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 2.0e-256 889.0 597 75.4
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 2.0e-256 889.0 596 74.5
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 2.6e-256 888.6 595 76.1
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 3.4e-256 888.3 596 74.3
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 3.4e-256 888.3 594 76.8
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 1.7e-255 885.9 594 75.3
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 4.8e-255 884.4 591 75.1
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 8.3e-255 883.6 596 74.3
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 1.8e-254 882.5 593 75.2
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 5.9e-253 877.5 591 75.0
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 5.9e-253 877.5 643 71.5
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 2.2e-252 875.5 591 74.8
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 3.8e-252 874.8 591 74.3
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 5.0e-252 874.4 598 74.1
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 8.5e-252 873.6 600 73.8
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 8.5e-252 873.6 596 73.7
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 1.1e-251 873.2 600 73.8
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 1.1e-251 873.2 549 78.5
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 1.2e-250 869.8 613 71.8
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 1.6e-250 869.4 541 78.9
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 4.7e-250 867.8 598 73.2
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 4.7e-250 867.8 598 73.2
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 1.0e-249 866.7 591 74.1
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 8.8e-249 863.6 595 72.1
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 3.4e-248 861.7 586 74.9
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 9.8e-248 860.1 593 73.2
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 3.7e-247 858.2 575 74.8
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 4.9e-247 857.8 592 73.3
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 6.3e-247 857.4 595 72.3
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 8.3e-247 857.1 544 78.5
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 5.4e-246 854.4 598 72.4
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 1.2e-245 853.2 592 72.5
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 1.6e-245 852.8 553 76.7
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 2.0e-245 852.4 555 76.4
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 2.0e-245 852.4 591 73.6
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 2.7e-245 852.0 586 73.4
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 1.3e-244 849.7 593 72.7
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 1.3e-244 849.7 538 77.3
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.9e-244 848.6 544 77.9
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 3.8e-244 848.2 593 71.8
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 6.6e-244 847.4 616 71.3
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 8.6e-244 847.0 593 71.5
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.9e-243 845.9 544 77.8
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 4.3e-243 844.7 542 77.9
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 4.7e-242 841.3 556 75.9
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 8.0e-242 840.5 575 74.3
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 1.4e-241 839.7 592 73.1
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 4.1e-238 828.2 592 73.8
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 1.8e-233 812.8 551 74.0
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 3.1e-233 812.0 592 71.5
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 4.4e-232 808.1 591 70.1
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 6.4e-231 804.3 517 77.0
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 1.1e-230 803.5 519 78.6
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.4e-230 803.1 578 71.6
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 1.7e-228 796.2 592 69.1
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 4.3e-227 791.6 537 72.8
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 2.0e-224 782.7 597 68.3
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 1.7e-220 769.6 523 75.9
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 5.1e-220 768.1 543 72.4
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 8.6e-220 767.3 517 73.1
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 1.1e-219 766.9 459 80.6
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 2.5e-219 765.8 520 74.0
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 5.6e-219 764.6 591 67.0
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 5.6e-219 764.6 562 69.0
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 9.9e-216 753.8 520 72.5
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 8.4e-215 750.7 515 74.0
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 1.4e-214 750.0 499 75.4
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 2.8e-210 735.7 442 80.8
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 2.8e-210 735.7 496 75.4
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 1.1e-209 733.8 491 75.8
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 5.2e-209 731.5 593 66.8
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 4.8e-202 708.4 538 68.2
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 1.1e-195 687.2 537 65.0
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 4.0e-193 678.7 519 67.2
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 6.4e-191 671.4 505 67.3
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 3.0e-188 662.5 594 60.1
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 5.8e-184 648.3 384 81.5
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 3.7e-178 629.0 507 64.5
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 2.7e-165 586.3 447 65.1
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 2.7e-165 586.3 388 75.3
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 4.1e-121 439.5 364 61.0
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 9.6e-94 348.6 393 49.4
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 4.9e-90 336.3 200 80.0
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-65 254.6 272 51.1
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-55 222.2 206 54.9
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 6.3e-53 213.0 141 72.3
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 1.2e-51 208.8 143 72.0
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 8.0e-40 169.5 100 79.0
BcaB08g34808 Brassica carinata HOM05D005895 ORTHO05D007916 3.0e-39 167.5 101 79.2
SEGI_08481 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 2.5e-33 147.9 101 67.3
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 5.0e-26 123.6 87 70.1
Ah.07g201790 Amaranthus hybridus HOM05D005895 ORTHO05D007916 1.6e-24 118.6 66 80.3
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 6.8e-23 113.2 174 41.4
Rhsim12G0041200 Rhododendron simsii HOM05D005895 ORTHO05D007916 9.8e-22 109.4 75 69.3
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 2.8e-21 107.8 73 71.2
CSS0038190 Camellia sinensis var. sinensis HOM05D033929 ORTHO05D026310 8.3e-21 106.3 118 50.0
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 2.3e-18 98.2 65 72.3
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 2.3e-18 98.2 65 72.3
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 3.3e-17 94.4 68 67.6
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 3.3e-17 94.4 68 67.6
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 4.2e-17 94.0 68 69.1
Gorai.012G172500 Gossypium raimondii HOM05D005895 ORTHO05D007916 1.0e-15 89.4 52 82.7
Actinidia08142 Actinidia chinensis HOM05D005895 ORTHO05D026310 1.9e-09 68.6 96 44.8
SEGI_38231 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.2e-06 59.3 38 71.1


User provided reference genes

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