Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 1.3e-50 203.0 124 100.0
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 2.9e-29 132.1 126 57.1
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 6.5e-29 131.0 121 57.9
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 2.5e-28 129.0 121 57.0
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 4.2e-28 128.3 127 55.9
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 5.5e-28 127.9 83 75.9
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 7.2e-28 127.5 127 56.7
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 1.2e-27 126.7 121 55.4
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 2.1e-27 125.9 127 56.7
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 6.1e-27 124.4 80 72.5
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 8.0e-27 124.0 80 70.0
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 8.0e-27 124.0 80 70.0
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 1.0e-26 123.6 122 57.4
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 1.4e-26 123.2 80 71.2
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 6.7e-26 120.9 77 76.6
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 8.8e-26 120.6 82 69.5
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 8.8e-26 120.6 124 52.4
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 1.1e-25 120.2 117 56.4
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 2.6e-25 119.0 127 55.1
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 5.7e-25 117.9 76 71.1
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 1.3e-24 116.7 85 69.4
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 1.3e-24 116.7 76 71.1
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.2e-24 115.9 76 72.4
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 2.8e-24 115.5 112 54.5
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 2.8e-24 115.5 121 50.4
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 4.8e-24 114.8 76 68.4
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 6.3e-24 114.4 76 71.1
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 6.3e-24 114.4 80 70.0
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 8.2e-24 114.0 76 69.7
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 8.2e-24 114.0 76 69.7
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 8.2e-24 114.0 121 52.1
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.1e-23 113.6 83 65.1
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 1.4e-23 113.2 81 66.7
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 1.4e-23 113.2 81 69.1
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.8e-23 112.8 76 68.4
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.4e-23 112.5 76 69.7
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 2.4e-23 112.5 76 68.4
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 2.4e-23 112.5 76 67.1
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 2.4e-23 112.5 76 67.1
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 3.1e-23 112.1 77 67.5
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 3.1e-23 112.1 78 67.9
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 3.1e-23 112.1 84 66.7
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 4.1e-23 111.7 76 67.1
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 7.0e-23 110.9 124 52.4
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 7.0e-23 110.9 76 71.1
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 7.0e-23 110.9 112 50.9
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 9.1e-23 110.5 86 66.3
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 9.1e-23 110.5 85 63.5
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 1.2e-22 110.2 76 67.1
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 1.2e-22 110.2 83 62.7
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.2e-22 110.2 126 50.8
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 1.2e-22 110.2 82 63.4
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 1.6e-22 109.8 86 66.3
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 1.6e-22 109.8 86 62.8
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 1.6e-22 109.8 65 75.4
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 1.6e-22 109.8 85 63.5
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 2.7e-22 109.0 81 63.0
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 4.5e-22 108.2 76 67.1
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 5.9e-22 107.8 76 69.7
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 5.9e-22 107.8 76 69.7
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 5.9e-22 107.8 79 60.8
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 5.9e-22 107.8 83 61.4
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 5.9e-22 107.8 83 61.4
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 5.9e-22 107.8 79 63.3
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 1.3e-21 106.7 80 66.2
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 1.3e-21 106.7 123 51.2
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 1.3e-21 106.7 81 63.0
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 1.3e-21 106.7 123 49.6
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.7e-21 106.3 84 61.9
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 2.2e-21 105.9 79 60.8
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 2.2e-21 105.9 79 60.8
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 3.8e-21 105.1 86 60.5
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 5.0e-21 104.8 87 64.4
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 6.5e-21 104.4 126 48.4
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 8.5e-21 104.0 76 64.5
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 8.5e-21 104.0 126 46.8
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 1.5e-20 103.2 126 49.2
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 1.9e-20 102.8 81 64.2
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 2.5e-20 102.4 85 61.2
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 3.2e-20 102.1 86 60.5
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 5.5e-20 101.3 126 47.6
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 7.2e-20 100.9 86 61.6
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 7.2e-20 100.9 86 59.3
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 9.4e-20 100.5 86 61.6
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 1.2e-19 100.1 83 57.8
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 1.2e-19 100.1 86 61.6
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 1.2e-19 100.1 78 61.5
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 1.2e-19 100.1 64 70.3
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 1.2e-19 100.1 83 61.4
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 1.6e-19 99.8 86 61.6
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 1.6e-19 99.8 86 60.5
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 1.6e-19 99.8 86 60.5
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 1.6e-19 99.8 83 61.4
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 1.6e-19 99.8 83 61.4
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 1.6e-19 99.8 83 61.4
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 1.6e-19 99.8 86 60.5
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 2.1e-19 99.4 61 73.8
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 2.1e-19 99.4 125 49.6
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 2.1e-19 99.4 112 50.0
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 2.1e-19 99.4 112 50.0
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 2.7e-19 99.0 83 57.8
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 2.7e-19 99.0 76 63.2
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 3.6e-19 98.6 82 57.3
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 3.6e-19 98.6 81 60.5
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 3.6e-19 98.6 81 60.5
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 3.6e-19 98.6 117 48.7
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 4.7e-19 98.2 86 57.0
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 4.7e-19 98.2 83 57.8
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 8.0e-19 97.4 122 48.4
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 8.0e-19 97.4 78 60.3
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 1.4e-18 96.7 116 47.4
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 1.8e-18 96.3 72 63.9
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 1.8e-18 96.3 78 60.3
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 2.3e-18 95.9 122 47.5
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 2.3e-18 95.9 81 55.6
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 4.0e-18 95.1 126 46.0
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 6.8e-18 94.4 76 60.5
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 2.6e-17 92.4 83 55.4
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 5.7e-17 91.3 85 54.1
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 4.1e-15 85.1 79 54.4
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 7.0e-15 84.3 57 66.7
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 2.5e-12 75.9 71 50.7
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 5.5e-12 74.7 61 54.1
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 2.3e-10 69.3 41 65.9
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 6.8e-10 67.8 83 42.2
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 4.4e-09 65.1 66 47.0
Oeu062074.1 Olea europaea HOM05D013196 ORTHO05D010523 2.7e-06 55.8 33 81.8


User provided reference genes

Program Settings