Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G2210 Punica granatum HOM05D000028 ORTHO05D336792 5.9e-106 387.5 191 100.0
PGR119G2177 Punica granatum HOM05D000028 ORTHO05D000390 3.6e-10 69.3 181 37.6
PGR119G1130 Punica granatum HOM05D000028 ORTHO05D000390 3.0e-09 66.2 191 38.7
Psat0s3306g0040 Pisum sativum HOM05D000028 ORTHO05D000390 9.8e-08 61.2 52 59.6
Medtr6g007757 Medicago truncatula HOM05D000028 ORTHO05D000390 2.2e-07 60.1 52 59.6
Psat1g059920 Pisum sativum HOM05D000028 ORTHO05D016459 2.2e-07 60.1 52 59.6
Cc07_g02470 Coffea canephora HOM05D000028 ORTHO05D000390 4.8e-07 58.9 54 55.6
Gohir.A11G067900 Gossypium hirsutum HOM05D000028 ORTHO05D000390 4.8e-07 58.9 61 55.7
GSVIVG01032511001 Vitis vinifera HOM05D000028 ORTHO05D000390 4.8e-07 58.9 67 52.2
Medtr6g007747 Medicago truncatula HOM05D000028 ORTHO05D000390 6.3e-07 58.5 52 59.6
Medtr6g007740 Medicago truncatula HOM05D000028 ORTHO05D000390 8.3e-07 58.2 52 59.6
Medtr6g007753 Medicago truncatula HOM05D000028 ORTHO05D000390 8.3e-07 58.2 52 57.7
Rhsim10G0025600 Rhododendron simsii HOM05D000028 ORTHO05D000390 1.1e-06 57.8 57 57.9
Sabra16G0217900 Salix brachista HOM05D000028 ORTHO05D000390 1.4e-06 57.4 67 50.7
Gohir.D11G071700 Gossypium hirsutum HOM05D000028 ORTHO05D000390 1.8e-06 57.0 61 52.5
Gorai.007G077000 Gossypium raimondii HOM05D000028 ORTHO05D000390 1.8e-06 57.0 61 52.5
Aqoxy3G00943 Aquilegia oxysepala HOM05D000028 ORTHO05D000390 2.4e-06 56.6 104 35.6
Dinv35037 Davidia involucrata HOM05D000028 ORTHO05D000390 2.4e-06 56.6 64 51.6
Manes.15G179000 Manihot esculenta HOM05D000028 ORTHO05D000390 2.4e-06 56.6 66 48.5
Rhsim10G0025500 Rhododendron simsii HOM05D000028 ORTHO05D000390 2.4e-06 56.6 57 56.1
Psat0s3306g0080 Pisum sativum HOM05D000028 ORTHO05D000390 3.1e-06 56.2 54 55.6
Psat7g122800 Pisum sativum HOM05D000028 ORTHO05D016459 3.1e-06 56.2 43 62.8
Glyma.19G011500 Glycine max HOM05D000028 ORTHO05D000390 4.1e-06 55.8 52 57.7
Psat5g047920 Pisum sativum HOM05D000028 ORTHO05D016459 4.1e-06 55.8 43 62.8
Atru.chr6.2175 Acer truncatum HOM05D000028 ORTHO05D000390 5.4e-06 55.5 64 53.1
CSS0005234 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D000390 5.4e-06 55.5 59 50.8
CSS0046096 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D000390 5.4e-06 55.5 59 50.8
Gohir.A03G141400 Gossypium hirsutum HOM05D000028 ORTHO05D000390 5.4e-06 55.5 64 56.2
Medtr6g007743 Medicago truncatula HOM05D000028 ORTHO05D000390 5.4e-06 55.5 45 60.0
Sed0002128 Sechium edule HOM05D000028 ORTHO05D000390 5.4e-06 55.5 61 52.5
Gohir.D02G164400 Gossypium hirsutum HOM05D000028 ORTHO05D000390 7.0e-06 55.1 64 56.2
Gorai.005G184300 Gossypium raimondii HOM05D000028 ORTHO05D000390 7.0e-06 55.1 64 56.2
Gorai.005G184400 Gossypium raimondii HOM05D000028 ORTHO05D000390 7.0e-06 55.1 64 56.2
Manes.01G197900 Manihot esculenta HOM05D000028 ORTHO05D000390 7.0e-06 55.1 60 55.0
Potri.001G337100 Populus trichocarpa HOM05D000028 ORTHO05D000390 9.1e-06 54.7 66 47.0
Thecc.02G247300 Theobroma cacao HOM05D000028 ORTHO05D000390 9.1e-06 54.7 48 60.4
TAR371G0479 Trochodendron aralioides HOM05D000028 ORTHO05D000390 9.1e-06 54.7 57 56.1


User provided reference genes

Program Settings