Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 1.4e-87 326.2 160 100.0
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 3.1e-63 245.4 168 75.6
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 1.3e-61 240.0 167 73.7
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.3e-61 240.0 167 73.7
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.3e-61 240.0 167 73.7
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.9e-61 238.8 167 73.7
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 4.9e-61 238.0 167 73.1
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 2.5e-57 225.7 171 73.7
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 3.3e-57 225.3 163 73.0
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 7.3e-57 224.2 162 71.6
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 1.2e-56 223.4 160 71.9
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 1.6e-56 223.0 161 73.3
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 6.2e-56 221.1 162 73.5
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 8.1e-56 220.7 171 73.1
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 1.1e-55 220.3 165 73.3
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 4.0e-55 218.4 163 74.2
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 1.5e-54 216.5 163 69.9
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 4.4e-54 214.9 162 67.9
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 7.5e-54 214.2 163 71.2
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 1.3e-53 213.4 169 71.0
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 1.7e-53 213.0 161 69.6
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 2.9e-53 212.2 171 69.0
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 2.9e-53 212.2 171 69.0
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 6.4e-53 211.1 161 68.9
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 8.3e-53 210.7 162 67.9
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 1.9e-52 209.5 153 71.9
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 5.4e-52 208.0 168 68.5
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 1.2e-51 206.8 161 67.1
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 1.2e-51 206.8 161 68.3
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 1.6e-51 206.5 173 68.2
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 1.6e-51 206.5 164 66.5
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 2.1e-51 206.1 167 67.7
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 2.1e-51 206.1 168 70.2
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 2.7e-51 205.7 165 68.5
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 3.5e-51 205.3 160 67.5
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 1.0e-50 203.8 154 71.4
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 1.0e-50 203.8 160 65.6
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 6.6e-50 201.1 164 64.0
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.1e-49 200.3 172 63.4
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 1.1e-49 200.3 161 64.6
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 1.9e-49 199.5 163 69.9
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 9.5e-49 197.2 163 69.9
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 1.2e-48 196.8 172 65.7
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 1.6e-48 196.4 155 70.3
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 1.6e-48 196.4 173 63.0
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 2.1e-48 196.1 161 65.2
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 2.1e-48 196.1 157 67.5
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 2.1e-48 196.1 167 65.9
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 2.8e-48 195.7 161 65.2
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 2.8e-48 195.7 171 63.2
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 4.7e-48 194.9 163 68.7
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 4.7e-48 194.9 166 63.9
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 8.1e-48 194.1 168 59.5
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 1.1e-47 193.7 166 63.9
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 1.1e-47 193.7 124 80.6
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 1.4e-47 193.4 156 66.7
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 1.8e-47 193.0 159 64.8
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 1.8e-47 193.0 163 67.5
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 3.1e-47 192.2 160 63.1
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 5.2e-47 191.4 162 64.2
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 5.2e-47 191.4 162 64.2
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 5.2e-47 191.4 163 60.1
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 2.0e-46 189.5 96 90.6
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 5.8e-46 188.0 165 64.8
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 5.8e-46 188.0 164 64.0
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 5.8e-46 188.0 172 61.6
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 5.8e-46 188.0 92 93.5
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 7.6e-46 187.6 92 94.6
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 9.9e-46 187.2 94 89.4
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 1.7e-45 186.4 104 87.5
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 2.9e-45 185.7 154 62.3
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 4.9e-45 184.9 92 93.5
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 8.4e-45 184.1 127 72.4
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 1.9e-44 183.0 92 90.2
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 3.2e-44 182.2 111 81.1
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 4.2e-44 181.8 127 71.7
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 1.6e-43 179.9 170 62.4
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 2.1e-43 179.5 157 65.0
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 3.5e-43 178.7 179 57.5
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 1.0e-42 177.2 184 57.1
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 1.0e-42 177.2 153 62.7
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 1.3e-42 176.8 185 52.4
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 5.1e-42 174.9 123 72.4
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 6.6e-42 174.5 155 60.0
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 3.3e-41 172.2 121 69.4
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 3.3e-41 172.2 86 89.5
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 2.4e-39 166.0 83 92.8
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 4.0e-39 165.2 86 87.2
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 3.4e-38 162.2 161 55.3
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 9.9e-38 160.6 81 91.4
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 7.1e-36 154.5 82 86.6
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 9.3e-36 154.1 80 87.5
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 1.2e-35 153.7 161 56.5
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 2.3e-34 149.4 75 89.3
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 3.9e-34 148.7 82 84.1
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 3.9e-34 148.7 87 73.6
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 8.7e-34 147.5 119 60.5
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 8.1e-32 141.0 138 62.3
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 8.1e-32 141.0 79 81.0
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 1.5e-30 136.7 100 66.0
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 2.0e-30 136.3 104 65.4
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 6.2e-24 114.8 83 73.5
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 5.3e-23 111.7 132 51.5
Actinidia06621 Actinidia chinensis HOM05D007437 ORTHO05D009422 1.8e-07 60.1 87 49.4


User provided reference genes

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