Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G2091 Punica granatum HOM05D013472 ORTHO05D015108 7.6e-278 959.9 497 100.0
PGR142G2288 Punica granatum HOM05D013472 ORTHO05D015108 1.4e-255 885.9 497 89.3
PGR083G1646 Punica granatum HOM05D013472 ORTHO05D015108 1.5e-249 865.9 497 88.3
PGR044G2228 Punica granatum HOM05D013472 ORTHO05D015108 5.1e-234 814.3 497 81.3
PGR142G1294 Punica granatum HOM05D013472 ORTHO05D015108 1.7e-229 799.3 497 80.3
PGR142G0060 Punica granatum HOM05D013472 ORTHO05D015108 5.9e-198 694.5 404 83.7
PGR031G1522 Punica granatum HOM05D013472 ORTHO05D015108 3.6e-195 685.3 490 68.6
PGR031G1298 Punica granatum HOM05D013472 ORTHO05D015108 1.2e-179 633.6 497 66.8
PGR042G3387 Punica granatum HOM05D013472 ORTHO05D015108 3.4e-153 545.8 295 93.2
PGR031G0529 Punica granatum HOM05D013472 ORTHO05D015108 5.8e-36 156.4 156 55.8
Sed0006040 Sechium edule HOM05D002881 ORTHO05D010329 7.4e-23 112.8 363 25.6
Thecc.10G137400 Theobroma cacao HOM05D002881 ORTHO05D002983 1.6e-22 111.7 361 26.0
PGR044G0485 Punica granatum HOM05D000047 ORTHO05D000589 6.9e-21 106.3 72 66.7
TWI56G0801 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 7.6e-20 102.8 331 24.2
Sopen05g013180 Solanum pennellii HOM05D002047 ORTHO05D001422 1.3e-19 102.1 309 28.5
Sopen05g014510 Solanum pennellii HOM05D002047 ORTHO05D001422 4.2e-18 97.1 333 25.8
TWI23G0459 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 1.2e-17 95.5 331 23.6
TWI53G0826 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 2.7e-17 94.4 404 23.5
Sopen02g007640 Solanum pennellii HOM05D002047 ORTHO05D001422 3.0e-16 90.9 360 25.0
Thecc.05G210100 Theobroma cacao HOM05D002881 ORTHO05D002983 1.1e-15 89.0 297 25.9
Thecc.06G098800 Theobroma cacao HOM05D002881 ORTHO05D010329 1.1e-15 89.0 292 27.7
Sopen11g020140 Solanum pennellii HOM05D002047 ORTHO05D001422 1.5e-15 88.6 309 26.5
Gorai.001G080800 Gossypium raimondii HOM05D002881 ORTHO05D002983 2.5e-15 87.8 279 25.1
TWI79G0344 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 1.3e-14 85.5 216 26.4
Sopen04g022160 Solanum pennellii HOM05D002047 ORTHO05D001422 2.8e-14 84.3 329 23.1
PGR042G1687 Punica granatum HOM05D000047 ORTHO05D015108 2.4e-13 81.3 57 56.1
Gohir.D13G093150 Gossypium hirsutum HOM05D002881 ORTHO05D002983 4.0e-13 80.5 316 23.4
Thecc.02G286200 Theobroma cacao HOM05D002881 ORTHO05D002983 1.5e-12 78.6 303 25.1
MBI16_g17764_MAGBIO Magnolia biondii HOM05D003711 ORTHO05D001786 2.2e-11 74.7 290 26.2
TPR.G23480 Trifolium pratense HOM05D002881 ORTHO05D002983 6.5e-11 73.2 286 23.8
Gohir.D01G148150 Gossypium hirsutum HOM05D002881 ORTHO05D002983 1.4e-10 72.0 276 23.9
Duzib235G1144 Durio zibethinus HOM05D002881 ORTHO05D002983 4.2e-10 70.5 352 20.7
Sopen11g019410 Solanum pennellii HOM05D002047 ORTHO05D001422 9.3e-10 69.3 213 25.4
Gorai.010G160500 Gossypium raimondii HOM05D002881 ORTHO05D002983 1.2e-09 68.9 233 24.9
MBI18_g15614_MAGBIO Magnolia biondii HOM05D003711 ORTHO05D001786 1.2e-09 68.9 284 26.4
MELO3C025327.2 Cucumis melo HOM05D002881 ORTHO05D002983 3.5e-09 67.4 232 25.0
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 4.6e-09 67.0 330 23.0
vmacro10773 Vaccinium macrocarpon HOM05D015182 ORTHO05D000827 1.3e-08 65.5 308 25.3
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-08 65.1 345 22.6
Medtr0029s0060 Medicago truncatula HOM05D002881 ORTHO05D002983 2.3e-08 64.7 342 22.2
Medtr8g052425 Medicago truncatula HOM05D002881 ORTHO05D002983 2.3e-08 64.7 279 24.0
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 2.3e-08 64.7 297 24.9
Medtr4g054440 Medicago truncatula HOM05D002881 ORTHO05D002983 3.0e-08 64.3 283 23.7
Medtr5g028560 Medicago truncatula HOM05D002881 ORTHO05D002983 3.0e-08 64.3 342 21.9
Medtr3g018710 Medicago truncatula HOM05D002881 ORTHO05D002983 5.1e-08 63.5 284 23.6
Medtr5g040810 Medicago truncatula HOM05D002881 ORTHO05D002983 8.7e-08 62.8 342 21.6
Medtr6g027000 Medicago truncatula HOM05D002881 ORTHO05D002983 8.7e-08 62.8 323 22.0
Medtr7g028120 Medicago truncatula HOM05D002881 ORTHO05D002983 8.7e-08 62.8 323 22.0
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 8.7e-08 62.8 360 21.9
Gohir.D12G068401 Gossypium hirsutum HOM05D002881 ORTHO05D002983 1.9e-07 61.6 202 23.3
Medtr3g013580 Medicago truncatula HOM05D002881 ORTHO05D002983 1.9e-07 61.6 320 21.6
Sopen09g007730 Solanum pennellii HOM05D008695 ORTHO05D001422 1.9e-07 61.6 279 24.4
Medtr3g100770 Medicago truncatula HOM05D002881 ORTHO05D002983 2.5e-07 61.2 317 22.1
Medtr5g036210 Medicago truncatula HOM05D002881 ORTHO05D002983 2.5e-07 61.2 317 22.1
Medtr7g079940 Medicago truncatula HOM05D002881 ORTHO05D002983 2.5e-07 61.2 342 21.3
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 2.5e-07 61.2 360 21.7
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 2.5e-07 61.2 361 21.9
Medtr5g074255 Medicago truncatula HOM05D002881 ORTHO05D002983 3.3e-07 60.8 323 21.7
Sopen04g020150 Solanum pennellii HOM05D002047 ORTHO05D001422 3.3e-07 60.8 201 24.4
PGSC0003DMG400022101 Solanum tuberosum HOM05D008695 ORTHO05D001422 4.3e-07 60.5 298 23.2
Medtr5g015640 Medicago truncatula HOM05D002881 ORTHO05D002983 5.7e-07 60.1 323 22.0
Medtr7g006680 Medicago truncatula HOM05D002881 ORTHO05D002983 5.7e-07 60.1 328 20.7
Medtr7g046110 Medicago truncatula HOM05D002881 ORTHO05D002983 5.7e-07 60.1 328 20.7
Medtr1g018990 Medicago truncatula HOM05D002881 ORTHO05D002983 7.4e-07 59.7 318 21.7
Medtr3g051650 Medicago truncatula HOM05D002881 ORTHO05D002983 7.4e-07 59.7 328 20.7
Medtr3g082580 Medicago truncatula HOM05D002881 ORTHO05D002983 7.4e-07 59.7 318 21.7
Medtr8g054530 Medicago truncatula HOM05D002881 ORTHO05D002983 7.4e-07 59.7 326 22.7
vmacro16092 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 7.4e-07 59.7 291 25.8
Medtr4g031710 Medicago truncatula HOM05D002881 ORTHO05D002983 9.7e-07 59.3 283 23.7
vmacro23372 Vaccinium macrocarpon HOM05D015182 ORTHO05D010968 9.7e-07 59.3 298 25.5
Medtr5g080530 Medicago truncatula HOM05D002881 ORTHO05D002983 1.3e-06 58.9 328 20.4
Medtr5g084310 Medicago truncatula HOM05D002881 ORTHO05D002983 1.3e-06 58.9 318 21.7
Medtr5g085650 Medicago truncatula HOM05D002881 ORTHO05D002983 1.3e-06 58.9 318 21.7
PGR142G3925 Punica granatum HOM05D000047 ORTHO05D000589 1.3e-06 58.9 35 88.6
QL09p053831 Quercus lobata HOM05D010068 ORTHO05D010968 1.6e-06 58.5 197 23.4
PGR142G3921 Punica granatum HOM05D000047 ORTHO05D015108 2.2e-06 58.2 32 81.2
vmacro07191 Vaccinium macrocarpon HOM05D015182 ORTHO05D010968 4.8e-06 57.0 286 25.5


User provided reference genes

Program Settings