Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G1825 Punica granatum HOM05D004095 ORTHO05D003197 8.9e-200 700.7 537 100.0
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 4.2e-32 143.7 211 57.8
Atru.chr3.863_Atru.chr3.864 Acer truncatum HOM05D004095 ORTHO05D003197 2.2e-28 131.3 214 50.9
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 3.7e-28 130.6 215 48.4
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 4.8e-28 130.2 217 55.8
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 3.1e-27 127.5 217 56.7
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 5.3e-27 126.7 173 55.5
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 1.7e-25 121.7 209 47.8
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 3.8e-25 120.6 217 51.2
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 6.5e-25 119.8 216 46.3
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.5e-24 117.9 217 56.2
FAN19G1292 Fragaria x ananassa HOM05D024588 ORTHO05D003197 5.7e-21 106.7 171 50.9
Prupe.7G171900 Prunus persica HOM05D004095 ORTHO05D003197 3.7e-20 104.0 166 53.0
Haze_03728 Corylus avellana HOM05D004095 ORTHO05D003197 1.8e-19 101.7 252 42.9
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 3.5e-18 97.4 170 47.1
GSVIVG01018727001 Vitis vinifera HOM05D004095 ORTHO05D003197 7.7e-18 96.3 186 46.8
FvH4_1g11400 Fragaria vesca HOM05D024588 ORTHO05D003197 1.3e-17 95.5 171 57.3
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.3e-17 95.5 218 47.7
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 2.9e-17 94.4 229 44.5
THA.LOC104807504 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 1.1e-16 92.4 207 42.0
RcHm_v2.0_Chr2g0098961 Rosa chinensis HOM05D024588 ORTHO05D003197 1.9e-16 91.7 173 55.5
THA.LOC104804274 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 9.4e-16 89.4 213 41.3
MD02G1126500 Malus domestica HOM05D004095 ORTHO05D003197 2.3e-14 84.7 139 59.0
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.0e-14 84.3 128 47.7
CARHR244340 Cardamine hirsuta HOM05D004095 ORTHO05D003197 8.8e-14 82.8 217 42.4
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.2e-13 82.4 219 38.8
Ciclev10025767m.g Citrus clementina HOM05D004095 ORTHO05D003197 4.4e-13 80.5 118 48.3
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 1.7e-12 78.6 159 46.5
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 2.2e-12 78.2 159 52.8
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 3.7e-12 77.4 201 39.8
Nn5g30782 Nelumbo nucifera HOM05D004095 ORTHO05D003197 1.4e-11 75.5 82 43.9
BcaNung05051 Brassica carinata HOM05D004095 ORTHO05D003197 3.1e-11 74.3 236 38.6
C07p61450 Brassica napus HOM05D004095 ORTHO05D003197 4.1e-11 73.9 236 42.4
CSS0036757 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 5.3e-11 73.6 140 36.4
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 7.0e-11 73.2 120 40.0
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 2.7e-10 71.2 201 40.8
A03p63990 Brassica napus HOM05D004095 ORTHO05D003197 3.5e-10 70.9 248 36.3
Gorai.008G208400 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.5e-10 70.9 144 37.5
MBI05_g23379_MAGBIO Magnolia biondii HOM05D004095 ORTHO05D003197 3.5e-10 70.9 174 44.8
BraA03t15466Z Brassica rapa HOM05D004095 ORTHO05D003197 7.7e-10 69.7 251 35.9
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 1.3e-09 68.9 153 45.1
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 1.7e-09 68.6 212 38.7
BolC7t46570H Brassica oleracea HOM05D004095 ORTHO05D003197 2.9e-09 67.8 252 40.5
Gohir.D12G193466 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.9e-09 67.8 144 36.8
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 3.8e-09 67.4 192 41.1
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 5.0e-09 67.0 86 43.0
Carub.0007s0428 Capsella rubella HOM05D004095 ORTHO05D003197 5.0e-09 67.0 224 43.3
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 5.0e-09 67.0 148 33.8
Cfa013982 Carpinus fangiana HOM05D004095 ORTHO05D003197 6.5e-09 66.6 93 37.6
PSO700G0117 Papaver somniferum HOM05D004095 ORTHO05D003197 6.5e-09 66.6 83 44.6
Lsat_1_v5_gn_8_29800 Lactuca sativa HOM05D004095 ORTHO05D003197 8.5e-09 66.2 179 43.0
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 8.5e-09 66.2 138 34.8
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 1.5e-08 65.5 172 43.0
Sc15g0004790 Simmondsia chinensis HOM05D004095 ORTHO05D003197 1.5e-08 65.5 203 39.4
AL7G15100 Arabidopsis lyrata HOM05D004095 ORTHO05D003197 1.9e-08 65.1 235 43.4
Sp7g33720 Schrenkiella parvula HOM05D004095 ORTHO05D003197 1.9e-08 65.1 234 42.3
C09p13630 Brassica napus HOM05D004095 ORTHO05D003197 2.5e-08 64.7 88 42.0
Actinidia15439 Actinidia chinensis HOM05D004095 ORTHO05D003197 3.2e-08 64.3 176 40.3
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 3.2e-08 64.3 222 35.6
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 3.2e-08 64.3 93 36.6
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 3.2e-08 64.3 113 35.4
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 3.2e-08 64.3 215 31.6
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 3.2e-08 64.3 203 36.0
BcaC04g22942 Brassica carinata HOM05D004095 ORTHO05D003197 5.5e-08 63.5 88 40.9
FAN23G2095 Fragaria x ananassa HOM05D024588 ORTHO05D003197 5.5e-08 63.5 87 48.3
C01p03060 Brassica napus HOM05D004095 ORTHO05D003197 7.2e-08 63.2 218 38.5
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 7.2e-08 63.2 141 36.9
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 7.2e-08 63.2 223 35.0
PSO170G2543 Papaver somniferum HOM05D004095 ORTHO05D003197 7.2e-08 63.2 88 39.8
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 9.4e-08 62.8 190 42.1
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 9.4e-08 62.8 154 45.5
Thecc.02G059700 Theobroma cacao HOM05D015147 ORTHO05D003197 1.2e-07 62.4 170 30.6
A09p11580 Brassica napus HOM05D004095 ORTHO05D003197 1.6e-07 62.0 88 39.8
BraA09t36805Z Brassica rapa HOM05D004095 ORTHO05D003197 1.6e-07 62.0 88 37.5
COL.COLO4_26117 Corchorus olitorius HOM05D004095 ORTHO05D003197 1.6e-07 62.0 97 36.1
Prupe.1G362500 Prunus persica HOM05D004095 ORTHO05D003197 2.7e-07 61.2 119 33.6
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 2.7e-07 61.2 154 43.5
Cpa.g.sc26.299 Carica papaya HOM05D004095 ORTHO05D003197 3.6e-07 60.8 110 41.8
HanXRQChr13g0387151 Helianthus annuus HOM05D004095 ORTHO05D003197 3.6e-07 60.8 205 39.0
GSVIVG01009951001 Vitis vinifera HOM05D004095 ORTHO05D003197 3.6e-07 60.8 126 48.4
BolC1t00292H Brassica oleracea HOM05D004095 ORTHO05D003197 4.7e-07 60.5 218 40.8
Lalb_Chr08g0246191 Lupinus albus HOM05D004095 ORTHO05D003197 6.1e-07 60.1 81 42.0
QL11p050200 Quercus lobata HOM05D004095 ORTHO05D003197 6.1e-07 60.1 114 36.8
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 6.1e-07 60.1 86 41.9
Actinidia17001 Actinidia chinensis HOM05D004095 ORTHO05D003197 8.0e-07 59.7 183 39.9
Eucgr.H00956 Eucalyptus grandis HOM05D066110 ORTHO05D003197 8.0e-07 59.7 93 39.8
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 8.0e-07 59.7 154 42.9
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.0e-06 59.3 184 39.7
Potri.005G242400 Populus trichocarpa HOM05D004095 ORTHO05D003197 1.0e-06 59.3 228 31.1
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.8e-06 58.5 184 39.1
DCAR_009498 Daucus carota HOM05D004095 ORTHO05D003197 1.8e-06 58.5 181 38.1
Dinv39538 Davidia involucrata HOM05D004095 ORTHO05D003197 1.8e-06 58.5 134 46.3
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 1.8e-06 58.5 143 32.2
BcaNung00778 Brassica carinata HOM05D004095 ORTHO05D003197 2.3e-06 58.2 220 45.0
C07p05400 Brassica napus HOM05D004095 ORTHO05D003197 2.3e-06 58.2 120 35.0
Sabra05G0187500 Salix brachista HOM05D004095 ORTHO05D003197 2.3e-06 58.2 109 36.7
AUR62040566 Chenopodium quinoa HOM05D004095 ORTHO05D003197 4.0e-06 57.4 229 28.4
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 4.0e-06 57.4 223 30.0
Hund01666 Selenicereus undatus HOM05D004095 ORTHO05D003197 4.0e-06 57.4 215 37.2
BcaB07g31703 Brassica carinata HOM05D004095 ORTHO05D003197 5.2e-06 57.0 170 44.7
CARHR069410 Cardamine hirsuta HOM05D008819 ORTHO05D003197 6.8e-06 56.6 91 35.2
Thhalv10027062m.g Eutrema salsugineum HOM05D004095 ORTHO05D003197 6.8e-06 56.6 152 30.9
Gorai.009G193100 Gossypium raimondii HOM05D004095 ORTHO05D003197 8.8e-06 56.2 154 31.8
MD15G1242000 Malus domestica HOM05D004095 ORTHO05D003197 8.8e-06 56.2 29 75.9


User provided reference genes

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