Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G1777 Punica granatum HOM05D007739 ORTHO05D009838 1.0e-108 396.7 200 100.0
Cfa009840 Carpinus fangiana HOM05D007739 ORTHO05D009838 1.6e-40 170.2 200 52.5
Haze_23208 Corylus avellana HOM05D007739 ORTHO05D009838 9.5e-38 161.0 180 53.3
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 2.1e-37 159.8 201 49.3
CSS0046040 Camellia sinensis var. sinensis HOM05D007739 ORTHO05D009838 8.0e-37 157.9 203 50.2
Glyma.02G280600 Glycine max HOM05D007739 ORTHO05D009838 2.9e-34 149.4 199 48.7
Actinidia11663 Actinidia chinensis HOM05D007739 ORTHO05D009838 2.7e-32 142.9 206 45.6
CiPaw.14G114800 Carya illinoinensis HOM05D007739 ORTHO05D009838 6.0e-32 141.7 203 48.3
LjContig00049g0023861 Lotus japonicus HOM05D007739 ORTHO05D009838 3.9e-31 139.0 201 46.8
Glyma.14G034000 Glycine max HOM05D007739 ORTHO05D009838 5.0e-31 138.7 198 46.5
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 8.6e-31 137.9 199 46.2
Nitab4.5_0001095g0030 Nicotiana tabacum HOM05D007739 ORTHO05D009838 1.6e-29 133.7 193 47.2
TPR.G19359 Trifolium pratense HOM05D007739 ORTHO05D009838 3.6e-29 132.5 204 44.6
Ca_06221_v3 Cicer arietinum L. HOM05D007739 ORTHO05D009838 1.4e-28 130.6 201 45.8
Rhsim01G0194300 Rhododendron simsii HOM05D007739 ORTHO05D009838 1.8e-28 130.2 200 44.0
Nitab4.5_0006104g0010 Nicotiana tabacum HOM05D007739 ORTHO05D009838 2.3e-28 129.8 215 44.2
Phvul.008G200100 Phaseolus vulgaris HOM05D007739 ORTHO05D009838 6.8e-28 128.3 202 45.5
Potri.009G072000 Populus trichocarpa HOM05D007739 ORTHO05D009838 1.2e-27 127.5 207 46.4
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 7.5e-27 124.8 205 45.9
DCAR_002115 Daucus carota HOM05D007739 ORTHO05D009838 2.9e-26 122.9 202 44.6
Cpa.g.sc157.69 Carica papaya HOM05D007739 ORTHO05D009838 4.6e-24 115.5 199 45.2
Sopen07g027120 Solanum pennellii HOM05D007739 ORTHO05D009838 6.0e-24 115.2 195 44.1
VMungo0647G2062 Vigna mungo HOM05D007739 ORTHO05D009838 7.8e-24 114.8 251 36.7
Solyc07g055110.3 Solanum lycopersicum HOM05D007739 ORTHO05D009838 1.7e-23 113.6 195 44.1
PGSC0003DMG400020420 Solanum tuberosum HOM05D007739 ORTHO05D009838 1.9e-22 110.2 191 43.5
SalBow6G6289 Salvia bowleyana HOM05D007739 ORTHO05D009838 3.3e-22 109.4 208 40.4
Peaxi162Scf00469g00320 Petunia axillaris HOM05D007739 ORTHO05D009838 9.5e-22 107.8 191 43.5
AL6G23160 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 2.8e-21 106.3 208 38.5
MSTRG.21351 Avicennia marina HOM05D007739 ORTHO05D009838 4.7e-21 105.5 209 37.8
Sp6g31280 Schrenkiella parvula HOM05D007739 ORTHO05D009838 6.2e-21 105.1 204 39.2
Migut.D00651 Erythranthe guttata HOM05D007739 ORTHO05D009838 1.1e-20 104.4 203 41.4
Thhalv10014740m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 4.0e-20 102.4 205 38.0
TAR633G2358 Trochodendron aralioides HOM05D007739 ORTHO05D009838 5.2e-20 102.1 201 42.8
AT5G12360 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 2.6e-19 99.8 205 38.0
Cc01_g05640 Coffea canephora HOM05D007739 ORTHO05D009838 7.5e-19 98.2 205 39.0
A10p25460 Brassica napus HOM05D007739 ORTHO05D009838 1.7e-18 97.1 203 36.0
THA.LOC104815614 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 1.7e-18 97.1 199 36.7
BolC9t59287H Brassica oleracea HOM05D007739 ORTHO05D009838 1.4e-17 94.0 204 36.8
Sc03g0010980 Simmondsia chinensis HOM05D007739 ORTHO05D009838 1.4e-17 94.0 196 39.3
AL3G26440 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 2.4e-17 93.2 200 36.0
SGA_v2.0_scaffold29G12264 Striga asiatica HOM05D007739 ORTHO05D009838 3.2e-17 92.8 196 38.3
THA.LOC104815612 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 3.2e-17 92.8 199 36.2
ECA233G0993 Erigeron canadensis HOM05D007739 ORTHO05D009838 5.4e-17 92.0 193 39.4
AT3G14190 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 1.2e-16 90.9 200 35.5
BraA10t44610Z Brassica rapa HOM05D007739 ORTHO05D009838 1.2e-16 90.9 203 35.5
C09p64530 Brassica napus HOM05D007739 ORTHO05D009838 2.7e-16 89.7 204 35.3
Lsat_1_v5_gn_5_70921 Lactuca sativa HOM05D007739 ORTHO05D009838 2.7e-16 89.7 206 35.9
CARHR200750 Cardamine hirsuta HOM05D007739 ORTHO05D009838 3.5e-16 89.4 178 38.2
Carub.0003s1380 Capsella rubella HOM05D007739 ORTHO05D009838 1.5e-14 84.0 196 35.2
Aa31LG3G14870 Aethionema arabicum HOM05D007739 ORTHO05D009838 1.9e-14 83.6 209 34.9
BcaB04g18824 Brassica carinata HOM05D007739 ORTHO05D009838 1.9e-14 83.6 202 33.2
Thhalv10021564m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 1.9e-14 83.6 202 34.7
A03p38660 Brassica napus HOM05D007739 ORTHO05D009838 2.5e-14 83.2 201 32.8
BraA03t13013Z Brassica rapa HOM05D007739 ORTHO05D009838 2.5e-14 83.2 201 32.8
Oeu001493.2 Olea europaea HOM05D007739 ORTHO05D009838 3.3e-14 82.8 206 33.5
C03p46780 Brassica napus HOM05D007739 ORTHO05D009838 1.8e-12 77.0 199 32.7
BcaC01g03953 Brassica carinata HOM05D007739 ORTHO05D009838 4.0e-12 75.9 203 34.0
BolC3t16943H Brassica oleracea HOM05D007739 ORTHO05D009838 5.2e-12 75.5 201 33.3
Sp3g12450 Schrenkiella parvula HOM05D007739 ORTHO05D009838 1.5e-11 73.9 193 33.2
CARHR089070 Cardamine hirsuta HOM05D007739 ORTHO05D009838 5.8e-11 72.0 204 32.8
unitig_578.g16651 Utricularia gibba HOM05D007739 ORTHO05D009838 1.3e-10 70.9 196 31.1
C01p50440 Brassica napus HOM05D007739 ORTHO05D009838 5.4e-09 65.5 200 32.0
BcaNung07312 Brassica carinata HOM05D007739 ORTHO05D009838 7.1e-09 65.1 200 32.5
BolC1t04996H Brassica oleracea HOM05D007739 ORTHO05D009838 3.5e-08 62.8 200 30.0
Nn7g36621 Nelumbo nucifera HOM05D007739 ORTHO05D009838 3.5e-08 62.8 118 37.3
Eucgr.J00706 Eucalyptus grandis HOM05D007739 ORTHO05D009838 6.0e-08 62.0 64 54.7
A01p39500 Brassica napus HOM05D007739 ORTHO05D009838 1.1e-06 57.8 199 32.2
BraA01t03991Z Brassica rapa HOM05D007739 ORTHO05D009838 1.5e-06 57.4 199 32.2
Aa31LG8G1440 Aethionema arabicum HOM05D007739 ORTHO05D009838 3.3e-06 56.2 113 38.9
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 5.6e-06 55.5 194 29.4
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 5.6e-06 55.5 114 37.7


User provided reference genes

Program Settings