Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 7.5e-107 390.6 203 100.0
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 7.8e-64 247.7 204 66.7
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 4.3e-62 241.9 206 65.5
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 9.6e-62 240.7 205 67.8
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 3.6e-61 238.8 205 67.8
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 3.6e-61 238.8 207 65.7
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 4.4e-59 231.9 209 65.1
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 5.8e-59 231.5 205 62.0
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 9.9e-59 230.7 205 65.9
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 1.3e-58 230.3 203 65.0
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 2.2e-58 229.6 205 63.9
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 7.1e-57 224.6 205 62.9
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 1.2e-56 223.8 203 61.6
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 2.7e-56 222.6 204 63.7
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 7.8e-56 221.1 203 62.6
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 3.0e-55 219.2 209 60.8
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 3.0e-55 219.2 209 58.9
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 3.9e-55 218.8 206 61.2
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 8.7e-55 217.6 205 61.5
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 1.5e-54 216.9 205 59.5
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 1.5e-54 216.9 203 62.1
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 1.5e-54 216.9 205 61.5
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 3.3e-54 215.7 205 62.9
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 5.6e-54 214.9 215 60.0
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 5.6e-54 214.9 210 60.0
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 7.3e-54 214.5 205 60.0
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 7.3e-54 214.5 205 61.0
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 1.3e-53 213.8 203 60.1
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 2.1e-53 213.0 205 61.5
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 3.6e-53 212.2 205 60.5
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.1e-52 210.7 209 57.9
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 1.8e-52 209.9 209 56.9
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 3.1e-52 209.1 203 60.6
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.2e-51 207.2 146 71.2
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 3.4e-51 205.7 205 60.5
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 9.9e-51 204.1 199 61.3
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 2.9e-50 202.6 204 58.3
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 3.8e-50 202.2 203 60.1
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 8.4e-50 201.1 208 57.7
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 1.1e-49 200.7 211 58.3
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 1.9e-49 199.9 237 53.2
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.4e-49 199.5 204 57.4
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 2.4e-49 199.5 196 60.2
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 3.2e-49 199.1 215 56.3
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 3.2e-49 199.1 152 70.4
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 4.2e-49 198.7 204 60.3
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 2.7e-48 196.1 209 55.0
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 2.7e-48 196.1 209 55.0
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 3.5e-48 195.7 209 54.5
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 4.6e-48 195.3 203 61.6
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 7.9e-48 194.5 224 51.8
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 3.0e-47 192.6 147 70.1
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 3.0e-47 192.6 214 55.1
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 6.6e-47 191.4 210 55.7
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 8.7e-47 191.0 148 68.9
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 1.9e-46 189.9 203 56.2
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 4.3e-46 188.7 216 52.8
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 1.3e-45 187.2 212 53.3
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 4.8e-45 185.3 209 53.1
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 8.1e-45 184.5 165 59.4
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 1.1e-44 184.1 205 53.2
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 1.8e-44 183.3 209 54.1
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 4.0e-44 182.2 217 53.5
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 5.3e-44 181.8 222 52.3
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 1.2e-43 180.6 204 55.4
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 5.8e-43 178.3 213 54.0
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 7.6e-43 177.9 212 53.8
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 1.7e-42 176.8 216 48.6
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 2.2e-42 176.4 218 52.3
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 3.8e-42 175.6 216 53.2
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 1.1e-41 174.1 203 55.7
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 1.1e-41 174.1 203 55.7
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 4.2e-41 172.2 256 44.9
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 2.1e-40 169.9 223 48.0
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 1.8e-39 166.8 213 48.4
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 2.3e-39 166.4 213 49.3
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 3.0e-39 166.0 227 46.3
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 3.0e-39 166.0 184 55.4
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 5.1e-39 165.2 213 48.4
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 5.1e-39 165.2 213 48.4
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.1e-38 164.1 165 57.6
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 9.6e-38 161.0 224 47.8
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 9.6e-38 161.0 236 44.1
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 1.3e-37 160.6 211 46.4
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 1.6e-37 160.2 226 45.1
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 1.1e-36 157.5 215 47.4
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 1.1e-36 157.5 211 47.4
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 2.4e-36 156.4 201 47.8
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 2.3e-31 139.8 145 53.8
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 3.0e-31 139.4 209 44.5
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 6.7e-31 138.3 231 41.1
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 7.4e-30 134.8 150 47.3
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 3.1e-28 129.4 163 48.5
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 3.8e-26 122.5 205 43.4
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 3.8e-26 122.5 126 61.1
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 3.2e-25 119.4 215 40.9
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 7.2e-25 118.2 128 55.5
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 7.9e-24 114.8 133 53.4
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 3.9e-23 112.5 126 54.0
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 1.5e-19 100.5 123 51.2
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.6e-16 90.5 95 55.8
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 3.3e-14 82.8 83 53.0
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 1.9e-09 67.0 91 44.0
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 2.3e-07 60.1 162 29.6


User provided reference genes

Program Settings