Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 1.1e-87 326.6 164 100.0
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 8.0e-51 204.1 165 66.7
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 1.3e-48 196.8 162 64.8
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 3.7e-48 195.3 131 75.6
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 3.1e-47 192.2 150 68.0
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 5.4e-47 191.4 121 79.3
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 7.0e-47 191.0 167 64.1
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.6e-46 189.9 147 68.0
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 1.6e-46 189.9 121 76.9
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 2.0e-46 189.5 146 66.4
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 2.0e-46 189.5 120 80.0
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 2.7e-46 189.1 147 67.3
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 6.6e-45 184.5 120 78.3
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 1.1e-44 183.7 122 74.6
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 1.5e-44 183.3 122 73.0
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 1.9e-44 183.0 133 69.2
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.9e-44 183.0 122 73.0
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.5e-44 182.6 120 73.3
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 4.3e-44 181.8 115 79.1
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 5.6e-44 181.4 142 65.5
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 7.3e-44 181.0 130 71.5
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 7.3e-44 181.0 122 73.0
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 7.3e-44 181.0 122 73.0
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 9.5e-44 180.6 114 78.9
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 9.5e-44 180.6 157 60.5
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 9.5e-44 180.6 162 59.9
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 1.6e-43 179.9 164 59.1
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 1.6e-43 179.9 130 70.8
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.6e-43 179.9 122 71.3
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 2.1e-43 179.5 132 68.2
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 2.8e-43 179.1 124 72.6
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 2.8e-43 179.1 166 60.2
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 2.8e-43 179.1 120 75.0
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 4.7e-43 178.3 158 63.9
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 8.0e-43 177.6 154 65.6
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 8.0e-43 177.6 154 65.6
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 8.0e-43 177.6 154 65.6
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 8.0e-43 177.6 130 68.5
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 1.0e-42 177.2 154 65.6
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 1.0e-42 177.2 154 65.6
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 1.0e-42 177.2 113 77.0
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 1.0e-42 177.2 130 70.0
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 1.0e-42 177.2 167 56.9
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 1.4e-42 176.8 162 59.9
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 2.3e-42 176.0 114 73.7
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 6.8e-42 174.5 126 73.0
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 6.8e-42 174.5 117 75.2
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 6.8e-42 174.5 120 72.5
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 8.9e-42 174.1 127 71.7
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 2.0e-41 172.9 124 71.0
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 2.6e-41 172.6 113 78.8
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 4.4e-41 171.8 115 77.4
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 7.5e-41 171.0 130 68.5
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 7.5e-41 171.0 123 70.7
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 9.8e-41 170.6 120 70.0
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 9.8e-41 170.6 117 73.5
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 9.8e-41 170.6 128 66.4
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 1.7e-40 169.9 122 72.1
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 4.9e-40 168.3 121 68.6
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 1.1e-39 167.2 127 65.4
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 1.4e-39 166.8 124 69.4
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 1.8e-39 166.4 124 68.5
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 1.8e-39 166.4 119 66.4
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 2.4e-39 166.0 157 59.2
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 4.1e-39 165.2 101 77.2
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 5.4e-39 164.9 122 68.0
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 7.0e-39 164.5 127 66.1
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 1.2e-38 163.7 119 68.1
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 1.2e-38 163.7 119 65.5
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 1.6e-38 163.3 165 55.2
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 2.7e-38 162.5 135 60.7
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 1.0e-37 160.6 139 64.7
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.1e-36 157.1 121 62.8
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 1.9e-36 156.4 150 55.3
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 8.0e-35 151.0 164 53.0
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 2.6e-33 146.0 97 72.2
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 5.8e-33 144.8 120 63.3
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 5.8e-33 144.8 138 60.1
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 4.9e-32 141.7 122 61.5
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 2.4e-31 139.4 95 73.7
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 4.1e-31 138.7 121 63.6
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 7.0e-31 137.9 96 71.9
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 6.0e-30 134.8 118 61.9
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 1.7e-29 133.3 93 72.0
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 3.9e-29 132.1 89 76.4
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 3.3e-28 129.0 87 74.7
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 9.5e-28 127.5 110 59.1
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 2.8e-27 125.9 104 67.3
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 2.3e-26 122.9 91 71.4
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 4.0e-26 122.1 111 53.2
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 6.8e-26 121.3 92 66.3
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 2.6e-25 119.4 90 68.9
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 4.1e-23 112.1 71 64.8
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 4.1e-23 112.1 120 47.5
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 1.6e-22 110.2 105 52.4
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 3.3e-20 102.4 170 40.0
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 6.2e-19 98.2 115 46.1
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 1.8e-18 96.7 122 45.1
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 5.8e-17 91.7 152 44.1
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 3.8e-16 89.0 136 40.4
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 8.4e-16 87.8 133 36.1
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 8.4e-16 87.8 136 39.7
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 1.6e-11 73.6 128 39.8
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 3.6e-11 72.4 60 61.7
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 9.0e-10 67.8 115 39.1
Actinidia24129 Actinidia chinensis HOM05D000070 ORTHO05D001255 2.7e-06 56.2 64 57.8


User provided reference genes

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