Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G1479 Punica granatum HOM05D003025 ORTHO05D003305 2.3e-235 818.5 418 100.0
Eucgr.G02421 Eucalyptus grandis HOM05D003025 ORTHO05D003305 7.8e-34 149.1 449 33.0
CiPaw.05G121600 Carya illinoinensis HOM05D003025 ORTHO05D003305 4.0e-30 136.7 449 32.3
GSVIVG01010102001 Vitis vinifera HOM05D003025 ORTHO05D003305 3.2e-27 127.1 425 32.7
Haze_11858 Corylus avellana HOM05D003025 ORTHO05D003305 2.1e-26 124.4 442 29.9
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 2.7e-26 124.0 441 29.7
CSS0010260 Camellia sinensis var. sinensis HOM05D003025 ORTHO05D003305 3.5e-26 123.6 458 29.0
TAR622G0187 Trochodendron aralioides HOM05D003025 ORTHO05D003305 7.8e-26 122.5 436 30.0
Dinv15582 Davidia involucrata HOM05D003025 ORTHO05D003305 1.0e-25 122.1 453 29.4
COL.COLO4_27800 Corchorus olitorius HOM05D003025 ORTHO05D003305 1.7e-25 121.3 479 28.8
PGR102G2660 Punica granatum HOM05D003025 ORTHO05D003305 8.6e-25 119.0 401 31.9
Hma1.2p1_0428F.1_g150820 Hydrangea macrophylla HOM05D003025 ORTHO05D003305 2.1e-23 114.4 449 30.1
Gohir.D13G085500 Gossypium hirsutum HOM05D003025 ORTHO05D003305 5.8e-21 106.3 484 27.9
Thecc.02G322700 Theobroma cacao HOM05D003025 ORTHO05D003305 9.9e-21 105.5 499 29.5
Gorai.013G097400 Gossypium raimondii HOM05D003025 ORTHO05D003305 1.3e-20 105.1 482 28.8
Gohir.A13G088100 Gossypium hirsutum HOM05D003025 ORTHO05D003305 2.2e-20 104.4 484 28.5
TWI31G1177 Tripterygium wilfordii HOM05D003025 ORTHO05D003305 4.9e-20 103.2 419 30.8
CiPaw.06G095000 Carya illinoinensis HOM05D003025 ORTHO05D003305 8.4e-20 102.4 489 27.6
Potri.008G111800 Populus trichocarpa HOM05D003025 ORTHO05D003305 1.4e-19 101.7 386 31.1
Duzib248G1661 Durio zibethinus HOM05D003025 ORTHO05D003305 2.4e-19 100.9 398 29.9
Lj6A773T133 Lonicera japonica HOM05D003025 ORTHO05D003305 2.4e-19 100.9 419 27.7
TAR374G0527 Trochodendron aralioides HOM05D003025 ORTHO05D003305 2.4e-19 100.9 439 27.8
Gorai.005G147700 Gossypium raimondii HOM05D003025 ORTHO05D003305 7.1e-19 99.4 419 30.1
Dinv34020 Davidia involucrata HOM05D003025 ORTHO05D003305 2.1e-18 97.8 400 29.5
Actinidia19904 Actinidia chinensis HOM05D003025 ORTHO05D003305 3.5e-18 97.1 407 27.5
Cc11_g11550 Coffea canephora HOM05D003025 ORTHO05D003305 3.0e-17 94.0 500 29.0
Gohir.D02G131800 Gossypium hirsutum HOM05D003025 ORTHO05D003305 3.0e-17 94.0 407 31.0
Manes.14G090300 Manihot esculenta HOM05D003025 ORTHO05D003305 3.9e-17 93.6 497 27.6
CSS0010060 Camellia sinensis var. sinensis HOM05D003025 ORTHO05D003305 5.1e-17 93.2 450 27.8
Rhsim12G0071300 Rhododendron simsii HOM05D003025 ORTHO05D003305 1.5e-16 91.7 381 28.3
Actinidia31928 Actinidia chinensis HOM05D003025 ORTHO05D003305 2.5e-16 90.9 410 28.3
Gohir.A03G106600 Gossypium hirsutum HOM05D003025 ORTHO05D003305 2.5e-16 90.9 487 28.1
Nn4g23540 Nelumbo nucifera HOM05D003025 ORTHO05D003305 7.3e-16 89.4 433 27.3
Actinidia07767 Actinidia chinensis HOM05D003025 ORTHO05D003305 1.2e-15 88.6 430 27.2
arahy.Tifrunner.gnm1.ann1.161SS5 Arachis hypogaea HOM05D003025 ORTHO05D003305 2.1e-15 87.8 310 31.6
Lj3A1027T87 Lonicera japonica HOM05D003025 ORTHO05D003305 3.6e-15 87.0 410 27.1
VMungo1215G0401 Vigna mungo HOM05D003025 ORTHO05D003305 3.6e-15 87.0 307 30.9
EL10Ac6g14672 Beta vulgaris HOM05D003025 ORTHO05D003305 1.1e-14 85.5 387 30.2
Rhsim09G0122100 Rhododendron simsii HOM05D003025 ORTHO05D003305 3.1e-14 84.0 492 26.8
Glyma.02G122700 Glycine max HOM05D003025 ORTHO05D003305 5.2e-14 83.2 429 27.0
TWI79G0747 Tripterygium wilfordii HOM05D003025 ORTHO05D003305 6.9e-14 82.8 421 27.3
Phvul.003G038300 Phaseolus vulgaris HOM05D003025 ORTHO05D003305 1.5e-13 81.6 307 31.3
Actinidia13406 Actinidia chinensis HOM05D003025 ORTHO05D003305 2.6e-13 80.9 387 26.4
Migut.L01161 Erythranthe guttata HOM05D003025 ORTHO05D003305 5.8e-13 79.7 402 26.9
Duzib251G0179 Durio zibethinus HOM05D003025 ORTHO05D003305 1.3e-12 78.6 477 26.4
BolC7t43953H Brassica oleracea HOM05D003025 ORTHO05D003305 1.7e-12 78.2 349 28.9
CsaV3_5G033470 Cucumis sativus L. HOM05D003025 ORTHO05D003305 1.7e-12 78.2 330 29.7
Lj2g0017874 Lotus japonicus HOM05D003025 ORTHO05D003305 2.2e-12 77.8 295 31.9
Potri.010G138100 Populus trichocarpa HOM05D003025 ORTHO05D003305 2.2e-12 77.8 513 25.3
vmacro01298 Vaccinium macrocarpon HOM05D003025 ORTHO05D003305 3.8e-12 77.0 324 28.1
vmacro10474 Vaccinium macrocarpon HOM05D003025 ORTHO05D003305 3.8e-12 77.0 388 26.5
PSO063G1603 Papaver somniferum HOM05D003025 ORTHO05D003305 8.4e-12 75.9 394 27.7
Sc04g0007330 Simmondsia chinensis HOM05D003025 ORTHO05D003305 1.1e-11 75.5 343 29.2
ClCG08G010610 Citrullus lanatus HOM05D003025 ORTHO05D003305 1.9e-11 74.7 452 24.6
Sabra08G0084400 Salix brachista HOM05D003025 ORTHO05D003305 2.4e-11 74.3 417 26.9
Ciclev10031644m.g Citrus clementina HOM05D003025 ORTHO05D003305 3.2e-11 73.9 412 26.2
arahy.Tifrunner.gnm1.ann1.8UFH9N Arachis hypogaea HOM05D003025 ORTHO05D003305 4.2e-11 73.6 318 29.6
CANSAT64G2528 Cannabis sativa HOM05D003025 ORTHO05D003305 4.2e-11 73.6 549 25.9
BraA06t27196Z Brassica rapa HOM05D003025 ORTHO05D003305 9.3e-11 72.4 354 29.1
MBI15_g31908_MAGBIO Magnolia biondii HOM05D003025 ORTHO05D003305 9.3e-11 72.4 371 28.3
A06p42840 Brassica napus HOM05D003025 ORTHO05D003305 1.2e-10 72.0 321 29.3
Manes.06G079500 Manihot esculenta HOM05D003025 ORTHO05D003305 1.6e-10 71.6 403 26.8
BcaC06g31142 Brassica carinata HOM05D003025 ORTHO05D003305 2.1e-10 71.2 331 28.4
ClCG05G023550 Citrullus lanatus HOM05D003025 ORTHO05D003305 6.0e-10 69.7 382 26.4
ECA234G4845 Erigeron canadensis HOM05D003025 ORTHO05D003305 7.8e-10 69.3 301 28.2
VMungo0251G3127 Vigna mungo HOM05D003025 ORTHO05D003305 7.8e-10 69.3 318 26.1
Ah.03g138600 Amaranthus hybridus HOM05D003025 ORTHO05D003305 1.0e-09 68.9 468 24.4
Glyma.01G064900 Glycine max HOM05D003025 ORTHO05D003305 1.7e-09 68.2 375 25.3
Solyc04g005290.3 Solanum lycopersicum HOM05D003025 ORTHO05D003305 2.3e-09 67.8 461 26.0
CsaV3_6G033910 Cucumis sativus L. HOM05D003025 ORTHO05D003305 3.0e-09 67.4 309 26.9
Oeu003749.3 Olea europaea HOM05D003025 ORTHO05D003305 3.0e-09 67.4 491 23.2
Medtr5g047930 Medicago truncatula HOM05D003025 ORTHO05D003305 3.9e-09 67.0 321 28.3
Sed0017206 Sechium edule HOM05D003025 ORTHO05D003305 3.9e-09 67.0 411 24.3
Sopen04g001270 Solanum pennellii HOM05D003025 ORTHO05D003305 5.1e-09 66.6 383 26.6
AUR62007872 Chenopodium quinoa HOM05D003025 ORTHO05D003305 6.6e-09 66.2 457 22.1
MELO3C011401.2 Cucumis melo HOM05D003025 ORTHO05D003305 1.1e-08 65.5 313 27.2
TPR.G38556 Trifolium pratense HOM05D003025 ORTHO05D003305 1.9e-08 64.7 319 28.8
DCAR_030058 Daucus carota HOM05D003025 ORTHO05D003305 5.6e-08 63.2 401 26.9
PSO782G5508 Papaver somniferum HOM05D003025 ORTHO05D003305 5.6e-08 63.2 388 26.3
Gohir.A12G159500 Gossypium hirsutum HOM05D003025 ORTHO05D003305 7.3e-08 62.8 359 27.6
Nitab4.5_0002491g0030 Nicotiana tabacum HOM05D003025 ORTHO05D003305 7.3e-08 62.8 432 24.8
Sed0016639 Sechium edule HOM05D003025 ORTHO05D003305 7.3e-08 62.8 370 27.6
Ca_05068_v3 Cicer arietinum L. HOM05D003025 ORTHO05D003305 1.3e-07 62.0 320 27.8
MELO3C012167.2 Cucumis melo HOM05D003025 ORTHO05D003305 1.3e-07 62.0 362 26.8
C09p31660 Brassica napus HOM05D003025 ORTHO05D003305 2.8e-07 60.8 312 28.2
BolC9t56021H Brassica oleracea HOM05D003025 ORTHO05D003305 2.8e-07 60.8 312 28.2
Sed0001557 Sechium edule HOM05D003025 ORTHO05D003305 2.8e-07 60.8 314 27.1
Sc11g0002650 Simmondsia chinensis HOM05D003025 ORTHO05D003305 2.8e-07 60.8 352 25.3
Oeu062245.1 Olea europaea HOM05D003025 ORTHO05D003305 3.6e-07 60.5 434 25.6
PGSC0003DMG400001936 Solanum tuberosum HOM05D003025 ORTHO05D003305 3.6e-07 60.5 386 25.4
Gorai.008G175400 Gossypium raimondii HOM05D003025 ORTHO05D003305 6.2e-07 59.7 355 26.8
Eucgr.B03118 Eucalyptus grandis HOM05D003025 ORTHO05D003305 8.1e-07 59.3 165 40.6
BcaC04g21446 Brassica carinata HOM05D003025 ORTHO05D003305 1.1e-06 58.9 304 29.3
Gohir.D12G162800 Gossypium hirsutum HOM05D003025 ORTHO05D003305 1.1e-06 58.9 377 26.5
Aqoxy3G03750 Aquilegia oxysepala HOM05D003025 ORTHO05D003305 1.4e-06 58.5 160 36.2
Peaxi162Scf00188g01025 Petunia axillaris HOM05D003025 ORTHO05D003305 1.4e-06 58.5 390 24.9
HanXRQChr12g0365071 Helianthus annuus HOM05D003025 ORTHO05D003305 2.4e-06 57.8 315 28.3
AUR62003057 Chenopodium quinoa HOM05D003025 ORTHO05D003305 4.0e-06 57.0 465 23.4
HanXRQChr08g0215591 Helianthus annuus HOM05D003025 ORTHO05D003305 4.0e-06 57.0 80 51.2
Lalb_Chr17g0341461 Lupinus albus HOM05D003025 ORTHO05D003305 4.0e-06 57.0 48 70.8
Dinv38641 Davidia involucrata HOM05D003025 ORTHO05D003305 5.3e-06 56.6 438 27.2
Nitab4.5_0001196g0010 Nicotiana tabacum HOM05D003025 ORTHO05D003305 6.9e-06 56.2 479 22.8
PGSC0003DMG400025716 Solanum tuberosum HOM05D003025 ORTHO05D003305 6.9e-06 56.2 400 23.2
HanXRQChr16g0528681 Helianthus annuus HOM05D003025 ORTHO05D003305 9.0e-06 55.8 344 25.0
THA.LOC104805213 Tarenaya hassleriana HOM05D003025 ORTHO05D003305 9.0e-06 55.8 387 26.6


User provided reference genes

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