Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 6.6e-134 480.7 243 100.0
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 1.0e-78 297.4 243 63.8
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 1.0e-73 280.8 256 58.2
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 2.1e-63 246.5 243 54.3
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 1.8e-62 243.4 255 52.9
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 2.3e-62 243.0 254 55.1
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 5.7e-61 238.4 256 51.6
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 1.8e-59 233.4 296 47.0
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 9.1e-59 231.1 247 55.5
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 4.5e-58 228.8 254 52.8
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 4.5e-58 228.8 260 48.1
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 3.8e-57 225.7 240 49.6
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 5.0e-57 225.3 241 50.6
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 2.5e-56 223.0 237 52.3
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 4.2e-56 222.2 240 52.5
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 1.2e-55 220.7 245 49.0
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 1.6e-55 220.3 255 48.2
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 4.7e-55 218.8 254 51.6
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 4.7e-55 218.8 256 52.3
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 1.0e-54 217.6 244 49.6
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 1.0e-54 217.6 246 51.6
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 1.4e-54 217.2 254 48.8
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 2.3e-54 216.5 237 51.5
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 2.3e-54 216.5 246 48.4
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 2.3e-54 216.5 256 48.4
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 2.3e-54 216.5 244 50.0
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 3.0e-54 216.1 256 48.4
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 5.1e-54 215.3 260 46.5
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 6.7e-54 214.9 241 51.9
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 6.7e-54 214.9 257 49.8
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 8.8e-54 214.5 251 51.8
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 1.5e-53 213.8 237 50.6
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 3.3e-53 212.6 264 48.9
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 4.4e-53 212.2 251 51.0
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 4.4e-53 212.2 250 48.0
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 5.7e-53 211.8 256 46.9
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 8.2e-52 208.0 247 47.8
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 5.3e-51 205.3 250 46.8
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 2.0e-50 203.4 250 46.8
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 3.5e-50 202.6 249 46.6
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 1.3e-49 200.7 257 47.5
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 6.5e-49 198.4 247 44.5
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 8.0e-47 191.4 244 48.8
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 1.1e-45 187.6 171 55.6
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 1.7e-44 183.7 208 50.0
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 2.2e-44 183.3 272 40.8
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 2.8e-44 183.0 250 46.0
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 4.8e-44 182.2 258 45.0
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 8.2e-44 181.4 239 44.4
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 1.4e-43 180.6 239 43.9
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 2.4e-43 179.9 239 44.8
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 2.4e-43 179.9 234 46.6
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 3.1e-43 179.5 239 44.8
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 4.1e-43 179.1 242 45.9
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 5.3e-43 178.7 268 41.0
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 7.0e-43 178.3 239 44.4
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 7.0e-43 178.3 248 46.0
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 9.1e-43 177.9 255 42.0
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 9.1e-43 177.9 159 54.7
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 2.6e-42 176.4 164 59.1
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 4.5e-42 175.6 239 42.7
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 4.5e-42 175.6 152 62.5
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 5.9e-42 175.3 273 42.9
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 1.0e-41 174.5 256 43.8
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 5.0e-41 172.2 244 44.3
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 8.5e-41 171.4 237 41.4
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 1.5e-40 170.6 246 43.9
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 1.5e-40 170.6 247 41.3
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 1.5e-40 170.6 247 41.3
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 1.5e-40 170.6 247 41.3
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 5.5e-40 168.7 198 48.5
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 8.0e-39 164.9 243 40.7
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 2.0e-37 160.2 246 41.1
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 5.7e-37 158.7 207 46.4
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 5.7e-37 158.7 170 51.2
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 7.5e-37 158.3 109 67.0
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 9.7e-37 157.9 269 39.4
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 9.7e-37 157.9 269 39.4
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 9.7e-37 157.9 225 45.3
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 6.3e-36 155.2 269 40.1
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 2.4e-35 153.3 305 37.0
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 7.7e-34 148.3 260 40.8
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 2.9e-33 146.4 198 42.4
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 6.5e-33 145.2 209 37.3
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 8.8e-30 134.8 158 51.3
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 2.0e-29 133.7 231 35.9
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 2.6e-29 133.3 261 34.1
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 3.4e-29 132.9 208 36.1
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 4.4e-29 132.5 241 34.9
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 5.7e-29 132.1 236 39.0
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 7.5e-29 131.7 251 37.8
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 1.3e-28 131.0 203 41.4
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 3.7e-28 129.4 271 32.8
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 6.3e-28 128.6 245 39.2
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 3.8e-25 119.4 276 30.8
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 4.2e-24 115.9 183 40.4
AagrBONN_evm.TU.Sc2ySwM_117.1984 Anthoceros agrestis HOM05D007225 ORTHO05D009062 6.1e-23 112.1 211 33.2
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 1.8e-22 110.5 98 49.0
SMO146G0397 Selaginella moellendorffii HOM05D007225 ORTHO05D009062 5.2e-22 109.0 262 28.2
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 1.8e-19 100.5 114 52.6
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 5.9e-18 95.5 93 52.7
Nitab4.5_0010123g0010 Nicotiana tabacum HOM05D007225 ORTHO05D009062 3.3e-16 89.7 144 40.3
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 3.3e-16 89.7 163 38.0
Nitab4.5_0008206g0020 Nicotiana tabacum HOM05D007225 ORTHO05D009062 5.6e-16 89.0 148 40.5
SEGI_25786 Sequoiadendron giganteum HOM05D021798 ORTHO05D009062 3.2e-11 73.2 150 31.3
Os04g0693200 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 1.1e-08 64.7 93 32.3
SMO143G0295 Selaginella moellendorffii HOM05D021798 ORTHO05D018028 1.8e-06 57.4 87 31.0


User provided reference genes

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