Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 5.3e-84 314.3 157 100.0
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 7.9e-72 273.9 157 91.7
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 1.8e-52 209.5 157 68.8
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 9.1e-52 207.2 157 68.2
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.2e-51 206.8 157 68.8
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 2.6e-51 205.7 157 68.2
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 2.6e-51 205.7 157 68.8
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 4.5e-51 204.9 157 68.2
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 7.7e-51 204.1 151 67.5
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.0e-50 203.8 157 68.2
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 1.7e-50 203.0 157 65.0
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 8.5e-50 200.7 157 67.5
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 8.5e-50 200.7 157 65.0
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 1.1e-49 200.3 157 65.0
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 1.1e-49 200.3 151 66.9
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 1.4e-49 199.9 156 66.0
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 1.9e-49 199.5 157 66.2
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 2.5e-49 199.1 157 65.6
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 3.2e-49 198.7 157 66.9
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 5.5e-49 198.0 157 64.3
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 7.2e-49 197.6 157 63.7
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 9.4e-49 197.2 157 63.7
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 1.6e-48 196.4 158 64.6
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 2.1e-48 196.1 156 64.7
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 2.1e-48 196.1 158 63.9
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 3.6e-48 195.3 148 67.6
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 4.6e-48 194.9 149 66.4
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 4.6e-48 194.9 148 66.9
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 6.1e-48 194.5 156 64.7
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 6.1e-48 194.5 157 65.0
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 6.1e-48 194.5 142 70.4
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 7.9e-48 194.1 157 63.1
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 1.8e-47 193.0 149 65.8
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 3.0e-47 192.2 157 61.8
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 3.9e-47 191.8 157 63.7
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 3.9e-47 191.8 148 64.9
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 6.7e-47 191.0 142 67.6
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 8.8e-47 190.7 157 61.8
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 1.5e-46 189.9 146 66.4
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 2.0e-46 189.5 157 61.8
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 2.0e-46 189.5 157 61.8
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 2.0e-46 189.5 157 63.1
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 2.0e-46 189.5 147 65.3
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.6e-46 189.1 157 61.1
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 3.3e-46 188.7 157 60.5
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 3.3e-46 188.7 157 61.1
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 7.4e-46 187.6 146 65.8
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 9.7e-46 187.2 148 62.8
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 1.3e-45 186.8 146 65.1
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 3.7e-45 185.3 151 61.6
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 4.8e-45 184.9 157 63.7
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 4.8e-45 184.9 147 62.6
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 4.8e-45 184.9 140 65.0
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 4.8e-45 184.9 147 61.9
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.1e-44 183.7 156 60.3
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 1.4e-44 183.3 161 60.2
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 1.8e-44 183.0 149 63.8
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 2.4e-44 182.6 148 62.8
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 4.1e-44 181.8 164 57.9
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 5.3e-44 181.4 146 63.0
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 6.9e-44 181.0 191 53.9
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 9.1e-44 180.6 148 62.8
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 1.2e-43 180.3 156 61.5
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 2.2e-42 176.0 146 61.0
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 3.8e-42 175.3 149 61.1
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 6.5e-42 174.5 148 59.5
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 1.4e-41 173.3 148 60.8
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 3.2e-41 172.2 135 63.7
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 5.5e-41 171.4 148 60.8
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 9.4e-41 170.6 142 59.9
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 1.2e-40 170.2 151 57.0
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 2.7e-40 169.1 133 65.4
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 3.6e-40 168.7 147 57.8
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 3.6e-40 168.7 147 57.8
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 6.1e-40 167.9 135 64.4
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.4e-39 166.8 145 60.0
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 1.1e-38 163.7 145 57.2
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 1.5e-38 163.3 157 54.8
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 5.7e-38 161.4 116 69.0
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 3.7e-37 158.7 137 62.0
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 7.0e-36 154.5 114 65.8
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 9.1e-36 154.1 158 55.7
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 3.5e-35 152.1 148 52.7
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 5.9e-35 151.4 157 51.6
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 5.9e-35 151.4 148 52.7
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 5.9e-35 151.4 148 52.7
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 1.3e-34 150.2 148 52.0
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 1.3e-34 150.2 148 52.0
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 1.7e-34 149.8 142 54.2
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 8.5e-34 147.5 158 51.3
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 1.1e-33 147.1 141 52.5
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 1.1e-33 147.1 145 52.4
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 1.5e-33 146.7 152 52.0
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 1.5e-33 146.7 148 51.4
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.5e-33 146.7 148 51.4
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 1.5e-33 146.7 115 61.7
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 3.2e-33 145.6 125 60.0
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 3.2e-33 145.6 141 52.5
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 5.5e-33 144.8 148 52.7
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 5.5e-33 144.8 148 50.0
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 3.6e-32 142.1 148 50.0
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 1.0e-31 140.6 119 61.3
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 2.3e-31 139.4 142 50.0
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 4.0e-31 138.7 138 50.7
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 1.2e-30 137.1 161 48.4
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 7.5e-30 134.4 111 60.4
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 1.3e-29 133.7 130 53.1
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 2.8e-29 132.5 133 53.4
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 2.0e-27 126.3 144 44.4
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 9.8e-22 107.5 65 73.8
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 1.3e-21 107.1 86 60.5
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 8.3e-21 104.4 148 42.6
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 3.1e-20 102.4 77 67.5
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.3e-18 96.3 152 43.4
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 8.9e-15 84.3 91 49.5
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 3.1e-12 75.9 117 41.9
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 2.0e-11 73.2 74 47.3
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 3.3e-09 65.9 61 55.7
PRCOL_00006274 Prasinoderma coloniale HOM05D006937 ORTHO05D008747 2.3e-07 59.7 85 36.5
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 4.4e-06 55.5 75 45.3
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 4.4e-06 55.5 66 50.0


User provided reference genes

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