Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 1.8e-68 262.7 152 100.0
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 5.7e-59 231.1 152 90.1
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 5.9e-32 141.4 147 70.1
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 5.5e-30 134.8 148 60.1
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 9.4e-30 134.0 148 66.2
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 1.0e-28 130.6 146 61.6
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 1.0e-28 130.6 146 61.6
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 6.8e-28 127.9 147 57.8
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 1.5e-27 126.7 146 63.0
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 1.5e-27 126.7 148 54.7
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.5e-27 126.7 148 54.7
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 2.0e-27 126.3 152 57.2
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 2.0e-27 126.3 148 54.7
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 2.0e-27 126.3 147 66.7
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 4.4e-27 125.2 147 59.9
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 7.5e-27 124.4 147 63.9
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 9.8e-27 124.0 148 54.7
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.7e-26 123.2 148 54.1
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.7e-26 123.2 147 66.0
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 6.3e-26 121.3 147 59.2
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 6.3e-26 121.3 146 58.2
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.4e-25 120.2 147 59.2
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.4e-25 120.2 147 66.0
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 3.1e-25 119.0 147 53.1
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 3.1e-25 119.0 150 55.3
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 4.1e-25 118.6 145 56.6
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 4.1e-25 118.6 148 61.5
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 7.0e-25 117.9 146 56.8
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 9.1e-25 117.5 147 61.9
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 3.5e-24 115.5 148 55.4
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 3.5e-24 115.5 147 59.9
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 4.5e-24 115.2 146 62.3
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 4.5e-24 115.2 148 54.7
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 7.7e-24 114.4 147 61.2
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 7.7e-24 114.4 146 52.7
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 1.7e-23 113.2 143 62.2
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.7e-23 113.2 146 54.1
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 5.0e-23 111.7 146 57.5
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 5.0e-23 111.7 143 60.8
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 6.5e-23 111.3 147 60.5
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 6.5e-23 111.3 149 60.4
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 8.5e-23 110.9 148 54.1
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 1.1e-22 110.5 147 63.3
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 3.2e-22 109.0 148 51.4
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 3.2e-22 109.0 146 50.7
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 4.2e-22 108.6 150 50.0
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 9.5e-22 107.5 146 48.6
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.2e-21 107.1 148 58.1
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 2.8e-21 105.9 128 56.2
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 2.8e-21 105.9 146 50.7
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 6.1e-21 104.8 91 68.1
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 6.1e-21 104.8 148 56.1
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 1.0e-20 104.0 145 53.1
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.8e-20 103.2 142 57.7
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 1.8e-20 103.2 87 66.7
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 4.0e-20 102.1 149 51.7
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 4.0e-20 102.1 139 61.9
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 8.8e-20 100.9 146 50.0
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 1.2e-19 100.5 147 50.3
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 1.2e-19 100.5 139 51.1
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 2.0e-19 99.8 130 53.1
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 2.6e-19 99.4 148 55.4
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 2.6e-19 99.4 147 49.7
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 3.4e-19 99.0 130 52.3
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 4.4e-19 98.6 92 65.2
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 5.7e-19 98.2 129 49.6
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 9.8e-19 97.4 147 51.7
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 9.8e-19 97.4 146 46.6
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 3.7e-18 95.5 129 53.5
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 8.3e-18 94.4 143 56.6
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.1e-17 94.0 91 76.9
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 1.1e-17 94.0 131 51.9
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 1.4e-17 93.6 93 77.4
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 4.1e-17 92.0 132 49.2
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 1.2e-16 90.5 129 61.2
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 2.0e-16 89.7 133 48.9
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 3.5e-16 89.0 149 43.6
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 5.9e-16 88.2 122 59.8
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 1.3e-15 87.0 129 45.7
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 1.7e-15 86.7 129 45.7
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 2.9e-15 85.9 146 52.1
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 2.9e-15 85.9 129 45.0
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 5.0e-15 85.1 147 45.6
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 8.6e-15 84.3 93 54.8
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 5.6e-14 81.6 101 49.5
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 2.8e-13 79.3 110 54.5
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 3.6e-13 79.0 153 39.2
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 8.0e-13 77.8 145 41.4
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 1.4e-12 77.0 145 40.0
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 5.2e-12 75.1 151 48.3
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 1.2e-11 73.9 66 57.6
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 4.4e-11 72.0 92 64.1
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 5.7e-11 71.6 145 41.4
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 5.7e-11 71.6 138 39.9
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 3.7e-10 68.9 157 41.4
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 1.1e-09 67.4 145 45.5
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 1.4e-09 67.0 102 56.9
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 3.2e-09 65.9 102 54.9
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 4.1e-09 65.5 147 35.4
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 4.1e-09 65.5 153 37.3
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 1.2e-08 63.9 117 42.7
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 2.0e-08 63.2 50 74.0
Cpa.g.sc178.36 Carica papaya HOM05D006398 ORTHO05D007983 4.6e-08 62.0 107 43.0
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 1.0e-07 60.8 90 57.8
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 3.0e-07 59.3 130 42.3
Aa31LG4G7260 Aethionema arabicum HOM05D000087 ORTHO05D002585 1.9e-06 56.6 68 67.6
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 2.5e-06 56.2 95 55.8
CARHR161080 Cardamine hirsuta HOM05D006398 ORTHO05D007983 9.5e-06 54.3 102 51.0


User provided reference genes

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