Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G0862 Punica granatum HOM05D005219 ORTHO05D006451 1.3e-205 719.5 367 100.0
PGR142G2743 Punica granatum HOM05D005219 ORTHO05D006451 5.7e-81 305.4 245 72.2
Eucgr.I00008 Eucalyptus grandis HOM05D005219 ORTHO05D006451 2.5e-28 130.6 253 39.5
Lj4C816G5 Lonicera japonica HOM05D005219 ORTHO05D006451 1.4e-26 124.8 246 39.0
Cfa002238 Carpinus fangiana HOM05D005219 ORTHO05D006451 1.8e-26 124.4 259 37.8
Prupe.4G281500 Prunus persica HOM05D005219 ORTHO05D006451 9.0e-26 122.1 251 38.6
MD15G1138200 Malus domestica HOM05D005219 ORTHO05D006451 1.3e-24 118.2 252 37.3
TAR381G1173 Trochodendron aralioides HOM05D005219 ORTHO05D006451 1.3e-24 118.2 262 38.5
Actinidia36586 Actinidia chinensis HOM05D005219 ORTHO05D004865 1.7e-24 117.9 257 39.3
Actinidia19951 Actinidia chinensis HOM05D005219 ORTHO05D006451 1.9e-23 114.4 257 37.7
Dinv16800 Davidia involucrata HOM05D005219 ORTHO05D006451 4.2e-23 113.2 247 39.3
GSVIVG01022419001 Vitis vinifera HOM05D005219 ORTHO05D006451 1.2e-22 111.7 243 35.0
Haze_25419 Corylus avellana HOM05D005219 ORTHO05D006451 4.6e-22 109.8 278 34.9
CiPaw.03G253500 Carya illinoinensis HOM05D005219 ORTHO05D006451 7.8e-22 109.0 251 33.9
CiPaw.04G179100 Carya illinoinensis HOM05D005219 ORTHO05D006451 2.3e-21 107.5 251 35.9
Gohir.A05G376400 Gossypium hirsutum HOM05D005219 ORTHO05D006451 3.0e-21 107.1 229 38.4
Gohir.D04G039600 Gossypium hirsutum HOM05D005219 ORTHO05D006451 5.1e-21 106.3 229 38.4
Hma1.2p1_0057F.1_g032080 Hydrangea macrophylla HOM05D005219 ORTHO05D006451 1.1e-20 105.1 248 35.5
CSS0003875 Camellia sinensis var. sinensis HOM05D005219 ORTHO05D006451 1.5e-20 104.8 251 37.5
CSS0004797 Camellia sinensis var. sinensis HOM05D005219 ORTHO05D006451 1.5e-20 104.8 251 37.5
vmacro12733 Vaccinium macrocarpon HOM05D005219 ORTHO05D006451 1.9e-20 104.4 256 32.4
TWI75G0018 Tripterygium wilfordii HOM05D005219 ORTHO05D006451 2.5e-20 104.0 249 36.5
Gorai.012G044600 Gossypium raimondii HOM05D005219 ORTHO05D006451 5.6e-20 102.8 225 38.2
MELO3C023202.2 Cucumis melo HOM05D005219 ORTHO05D006451 1.3e-19 101.7 248 35.9
MSTRG.23501 Avicennia marina HOM05D005219 ORTHO05D006451 1.6e-19 101.3 251 35.9
Rhsim10G0123800 Rhododendron simsii HOM05D005219 ORTHO05D006451 2.8e-19 100.5 257 34.6
Thecc.01G233500 Theobroma cacao HOM05D005219 ORTHO05D006451 3.6e-19 100.1 259 35.1
CsaV3_2G019800 Cucumis sativus L. HOM05D005219 ORTHO05D006451 4.8e-19 99.8 247 36.0
Medtr8g095210 Medicago truncatula HOM05D005219 ORTHO05D006451 4.8e-19 99.8 246 35.4
QL10p038974 Quercus lobata HOM05D005219 ORTHO05D006451 4.8e-19 99.8 257 32.3
Duzib147G1025 Durio zibethinus HOM05D005219 ORTHO05D006451 6.2e-19 99.4 255 35.3
EL10Ac4g08973 Beta vulgaris HOM05D005219 ORTHO05D006451 8.1e-19 99.0 247 32.8
Atru.chr4.1140 Acer truncatum HOM05D005219 ORTHO05D006451 1.1e-18 98.6 242 36.4
Ciclev10025072m.g Citrus clementina HOM05D005219 ORTHO05D006451 1.1e-18 98.6 247 34.4
Nn1g08341 Nelumbo nucifera HOM05D005219 ORTHO05D006451 1.8e-18 97.8 257 33.5
Oeu037875.1 Olea europaea HOM05D005219 ORTHO05D006451 1.8e-18 97.8 242 34.3
Atru.chr4.1215 Acer truncatum HOM05D005219 ORTHO05D006451 3.1e-18 97.1 242 36.0
arahy.Tifrunner.gnm1.ann1.9Z2GEU Arachis hypogaea HOM05D005219 ORTHO05D006451 3.1e-18 97.1 246 32.1
Lsat_1_v5_gn_5_69540 Lactuca sativa HOM05D005219 ORTHO05D006451 5.3e-18 96.3 249 34.9
Hund22177 Selenicereus undatus HOM05D005219 ORTHO05D006451 6.9e-18 95.9 245 34.3
Potri.019G008541 Populus trichocarpa HOM05D005219 ORTHO05D006451 9.0e-18 95.5 255 33.3
Hund06895 Selenicereus undatus HOM05D005219 ORTHO05D006451 1.2e-17 95.1 249 34.1
Manes.13G076600 Manihot esculenta HOM05D005219 ORTHO05D006451 2.6e-17 94.0 259 32.8
arahy.Tifrunner.gnm1.ann1.4364K7 Arachis hypogaea HOM05D005219 ORTHO05D006451 3.4e-17 93.6 246 32.9
Sed0017542 Sechium edule HOM05D005219 ORTHO05D006451 3.4e-17 93.6 246 35.0
Oeu011013.3 Olea europaea HOM05D005219 ORTHO05D006451 4.5e-17 93.2 242 31.8
FAN23G1877 Fragaria x ananassa HOM05D005219 ORTHO05D006451 5.8e-17 92.8 246 32.5
FAN28G0381 Fragaria x ananassa HOM05D005219 ORTHO05D006451 5.8e-17 92.8 246 32.5
FvH4_1g25450 Fragaria vesca HOM05D005219 ORTHO05D006451 9.9e-17 92.0 246 31.3
SHI11418 Sapria himalayana HOM05D005219 ORTHO05D006451 9.9e-17 92.0 262 32.1
ClCG02G000120 Citrullus lanatus HOM05D005219 ORTHO05D006451 1.3e-16 91.7 247 34.0
HanXRQChr02g0043081 Helianthus annuus HOM05D005219 ORTHO05D006451 1.3e-16 91.7 242 35.1
Glyma.05G197300 Glycine max HOM05D005219 ORTHO05D006451 1.7e-16 91.3 251 32.3
Sabra19G0006900 Salix brachista HOM05D005219 ORTHO05D006451 2.2e-16 90.9 255 32.9
RcHm_v2.0_Chr2g0123471 Rosa chinensis HOM05D005219 ORTHO05D006451 8.4e-16 89.0 247 32.0
Cpa.g.sc37.82 Carica papaya HOM05D005219 ORTHO05D006451 1.4e-15 88.2 264 33.0
TPR.G12784 Trifolium pratense HOM05D005219 ORTHO05D006451 1.4e-15 88.2 249 28.1
Glyma.08G004700 Glycine max HOM05D005219 ORTHO05D006451 1.9e-15 87.8 252 32.5
FAN19G1780 Fragaria x ananassa HOM05D005219 ORTHO05D006451 2.4e-15 87.4 238 30.3
Phvul.002G277800 Phaseolus vulgaris HOM05D005219 ORTHO05D006451 2.4e-15 87.4 197 36.0
FAN26G1898 Fragaria x ananassa HOM05D005219 ORTHO05D006451 4.2e-15 86.7 247 32.4
Sc09g0004330 Simmondsia chinensis HOM05D005219 ORTHO05D006451 5.4e-15 86.3 245 32.7
Ca_17595_v3 Cicer arietinum L. HOM05D005219 ORTHO05D006451 7.1e-15 85.9 248 30.6
Lj4g0026114 Lotus japonicus HOM05D005219 ORTHO05D006451 7.1e-15 85.9 246 30.9
Psat7g041880 Pisum sativum HOM05D005219 ORTHO05D006451 7.1e-15 85.9 251 29.9
AUR62036029 Chenopodium quinoa HOM05D005219 ORTHO05D006451 9.3e-15 85.5 242 31.4
PSO170G0098 Papaver somniferum HOM05D005219 ORTHO05D006451 9.3e-15 85.5 150 40.0
PSO782G1219 Papaver somniferum HOM05D005219 ORTHO05D006451 9.3e-15 85.5 150 40.0
SGA_v2.0_scaffold54G19585 Striga asiatica HOM05D005219 ORTHO05D006451 1.2e-14 85.1 243 31.3
SGA_v2.0_scaffold211G42145 Striga asiatica HOM05D005219 ORTHO05D006451 2.1e-14 84.3 249 31.7
AUR62004810 Chenopodium quinoa HOM05D005219 ORTHO05D006451 2.7e-14 84.0 243 31.7
Lalb_Chr12g0202821 Lupinus albus HOM05D005219 ORTHO05D006451 3.5e-14 83.6 196 33.7
Cc00_g05550 Coffea canephora HOM05D005219 ORTHO05D006451 7.9e-14 82.4 262 30.5
Lalb_Chr13g0296831 Lupinus albus HOM05D005219 ORTHO05D006451 1.0e-13 82.0 250 30.0
Solyc05g056530.4 Solanum lycopersicum HOM05D005219 ORTHO05D006451 3.9e-13 80.1 193 37.8
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 5.1e-13 79.7 244 31.6
Aa31LG3G17910 Aethionema arabicum HOM05D005219 ORTHO05D006451 6.7e-13 79.3 253 31.2
Ah.06g191770 Amaranthus hybridus HOM05D005219 ORTHO05D006451 6.7e-13 79.3 242 31.4
Glyma.06G159700 Glycine max HOM05D005219 ORTHO05D006451 1.1e-12 78.6 133 40.6
Nitab4.5_0000496g0030 Nicotiana tabacum HOM05D005219 ORTHO05D006451 1.1e-12 78.6 242 32.2
Sopen05g034930 Solanum pennellii HOM05D005219 ORTHO05D006451 1.1e-12 78.6 193 37.3
Migut.H00795 Erythranthe guttata HOM05D005219 ORTHO05D006451 1.5e-12 78.2 244 31.1
Nitab4.5_0002704g0040 Nicotiana tabacum HOM05D005219 ORTHO05D006451 1.9e-12 77.8 242 32.2
CDE06G1179 Ceratophyllum demersum HOM05D005219 ORTHO05D006451 3.3e-12 77.0 161 37.3
Phvul.009G157400 Phaseolus vulgaris HOM05D005219 ORTHO05D006451 3.3e-12 77.0 246 30.5
ATR1136G012 Amborella trichopoda HOM05D005219 ORTHO05D006451 1.6e-11 74.7 239 28.9
CAN.G1156.53 Capsicum annuum HOM05D005219 ORTHO05D006451 1.6e-11 74.7 189 37.0
DCAR_009584 Daucus carota HOM05D005219 ORTHO05D006451 1.6e-11 74.7 256 31.2
CANSAT54G2070 Cannabis sativa HOM05D005219 ORTHO05D006451 2.1e-11 74.3 255 29.4
PGSC0003DMG400023442 Solanum tuberosum HOM05D005219 ORTHO05D006451 2.1e-11 74.3 193 35.8
BcaB01g05651 Brassica carinata HOM05D005219 ORTHO05D006451 4.8e-11 73.2 262 29.4
C03p04490 Brassica napus HOM05D005219 ORTHO05D006451 4.8e-11 73.2 262 29.4
Aqoxy6G00109 Aquilegia oxysepala HOM05D005219 ORTHO05D006451 6.2e-11 72.8 243 31.7
Potri.004G138900 Populus trichocarpa HOM05D005219 ORTHO05D006451 6.2e-11 72.8 255 29.8
AT5G08630 Arabidopsis thaliana HOM05D005219 ORTHO05D006451 8.1e-11 72.4 266 30.1
Carub.0006s0762 Capsella rubella HOM05D005219 ORTHO05D006451 1.1e-10 72.0 281 29.2
VMungo1309G1202 Vigna mungo HOM05D005219 ORTHO05D006451 1.4e-10 71.6 260 26.9
A10p28110 Brassica napus HOM05D005219 ORTHO05D006451 2.4e-10 70.9 262 30.2
Sp6g34240 Schrenkiella parvula HOM05D005219 ORTHO05D006451 2.4e-10 70.9 171 33.9
Peaxi162Scf00525g00059 Petunia axillaris HOM05D005219 ORTHO05D006451 4.0e-10 70.1 243 31.7
BraA03t09746Z Brassica rapa HOM05D005219 ORTHO05D006451 5.3e-10 69.7 188 32.4
THA.LOC104818408 Tarenaya hassleriana HOM05D005219 ORTHO05D006451 5.3e-10 69.7 256 27.7
CARHR204350 Cardamine hirsuta HOM05D005219 ORTHO05D006451 6.9e-10 69.3 271 30.6
AL6G19360 Arabidopsis lyrata HOM05D005219 ORTHO05D006451 2.6e-09 67.4 279 28.0
BraA10t44860Z Brassica rapa HOM05D005219 ORTHO05D006451 4.5e-09 66.6 271 26.9
ATR0721G071 Amborella trichopoda HOM05D005219 ORTHO05D006451 2.9e-08 63.9 114 36.8
DCAR_019997 Daucus carota HOM05D005219 ORTHO05D006451 3.8e-08 63.5 242 28.5
BolC9t59579H Brassica oleracea HOM05D005219 ORTHO05D006451 1.1e-07 62.0 268 30.2
HPP92_011421 Vanilla planifolia HOM05D005219 ORTHO05D006451 1.1e-07 62.0 145 33.1
A03p04030 Brassica napus HOM05D005219 ORTHO05D006451 9.3e-07 58.9 226 27.4
C09p68310 Brassica napus HOM05D005219 ORTHO05D006451 1.6e-06 58.2 256 27.7
ATR0737G007 Amborella trichopoda HOM05D005219 ORTHO05D006451 2.1e-06 57.8 254 27.6
BcaB08g37236 Brassica carinata HOM05D005219 ORTHO05D006451 2.7e-06 57.4 243 27.2
unitig_899.g14489 Utricularia gibba HOM05D005219 ORTHO05D006451 2.7e-06 57.4 252 28.6
Zm00001eb182070 Zea mays HOM05D005219 ORTHO05D006451 4.6e-06 56.6 262 26.0


User provided reference genes

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