Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 0.0e+00 1557.7 862 100.0
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 5.9e-312 1074.3 805 68.3
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 1.2e-311 1073.2 807 69.6
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 2.0e-310 1068.9 812 68.2
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 1.1e-305 1053.1 811 66.6
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.1e-305 1053.1 811 66.6
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.5e-305 1052.7 811 66.7
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 8.1e-304 1047.0 817 68.2
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 5.8e-302 1040.8 804 66.8
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 1.2e-299 1033.1 805 66.3
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 5.7e-297 1024.2 811 68.8
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 7.4e-297 1023.8 811 65.0
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.3e-296 1023.1 813 68.8
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.6e-296 1022.7 810 68.0
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 2.0e-294 1015.8 734 71.9
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 3.4e-294 1015.0 827 64.0
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 1.7e-293 1012.7 760 71.4
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 3.8e-293 1011.5 790 65.8
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 7.2e-292 1007.3 812 63.5
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.8e-290 1002.7 806 67.4
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 1.5e-289 999.6 803 64.6
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 1.9e-289 999.2 806 67.2
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 2.5e-289 998.8 825 65.8
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 9.7e-289 996.9 809 65.5
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 4.5e-286 988.0 782 66.6
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 3.9e-282 974.9 704 72.9
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 2.6e-281 972.2 590 79.5
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 2.6e-281 972.2 792 65.7
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 1.8e-279 966.1 756 67.1
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 2.0e-278 962.6 739 67.4
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 2.6e-278 962.2 739 67.3
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 2.9e-277 958.7 804 65.4
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 6.5e-277 957.6 763 64.9
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 1.1e-276 956.8 694 71.3
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 9.4e-276 953.7 737 66.1
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 9.4e-276 953.7 680 72.1
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 2.3e-274 949.1 809 62.1
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 8.8e-274 947.2 792 63.6
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 1.7e-272 943.0 749 64.0
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 8.2e-272 940.6 764 63.4
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 8.2e-272 940.6 809 63.0
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 3.5e-270 935.3 809 62.8
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 4.5e-270 934.9 817 63.2
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 1.0e-269 933.7 811 61.9
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 1.0e-269 933.7 792 63.6
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 1.0e-269 933.7 788 63.8
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 3.8e-269 931.8 817 62.8
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 7.2e-268 927.5 795 62.8
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 2.3e-266 922.5 815 60.2
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 5.2e-266 921.4 688 68.9
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 7.5e-265 917.5 810 62.2
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 1.7e-264 916.4 800 62.2
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 1.4e-263 913.3 824 60.8
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 3.1e-263 912.1 810 62.1
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 5.9e-262 907.9 805 60.4
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 7.7e-262 907.5 694 68.7
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 2.9e-261 905.6 810 63.3
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 3.8e-261 905.2 741 66.8
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 5.0e-261 904.8 799 61.5
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.9e-260 902.9 891 56.6
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 8.0e-259 897.5 825 61.0
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 1.0e-258 897.1 595 73.6
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 4.0e-258 895.2 814 60.3
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 1.4e-255 886.7 823 60.6
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 2.5e-252 875.9 786 62.0
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 1.8e-250 869.8 812 61.2
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 7.5e-249 864.4 819 57.6
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 1.3e-248 863.6 815 58.8
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 2.3e-245 852.8 534 72.7
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 1.9e-244 849.7 844 56.8
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 8.9e-242 840.9 733 62.5
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 2.0e-241 839.7 783 59.0
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 9.8e-241 837.4 780 55.6
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 1.1e-239 833.9 793 59.1
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 7.0e-239 831.2 806 57.6
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 1.6e-238 830.1 723 64.3
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 5.0e-237 825.1 759 57.4
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 8.6e-237 824.3 803 59.7
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 5.6e-236 821.6 784 60.1
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 2.3e-234 816.2 888 53.5
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 3.4e-233 812.4 888 53.2
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 3.2e-231 805.8 750 60.9
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 4.1e-231 805.4 719 62.2
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 1.9e-223 780.0 812 54.3
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 7.1e-223 778.1 794 54.0
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 6.4e-216 755.0 779 54.7
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 7.3e-212 741.5 614 65.6
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 1.1e-178 631.3 519 63.0
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 1.4e-167 594.3 394 71.8
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.9e-159 567.4 810 44.9
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 4.7e-158 562.8 459 59.0
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 6.1e-158 562.4 590 57.8
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 1.4e-157 561.2 523 53.9
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.6e-156 557.0 343 73.8
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 4.4e-140 503.1 585 47.9
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 1.3e-139 501.5 501 56.1
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 2.2e-139 500.7 411 68.1
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 3.7e-131 473.4 264 79.9
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 1.0e-112 412.1 346 56.4
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.6e-108 397.5 372 55.1
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 6.8e-101 372.9 349 55.3
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 1.1e-98 365.5 188 86.2
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 1.3e-91 342.0 196 78.6
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 4.2e-90 337.0 329 66.9
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 5.4e-90 336.7 515 45.6
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 1.1e-79 302.4 178 75.8
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 2.1e-57 228.4 338 53.0
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 2.2e-38 165.2 117 68.4
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 5.2e-32 144.1 83 75.9
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 2.4e-29 135.2 350 29.4
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.2e-22 112.1 112 47.3
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 1.7e-19 102.4 77 62.3
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 3.6e-17 94.7 72 52.8
Actinidia27040 Actinidia chinensis HOM05D007000 ORTHO05D030830 2.6e-07 62.0 284 31.7


User provided reference genes

Program Settings