Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 1.3e-97 359.8 192 100.0
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 1.6e-63 246.5 185 75.1
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 9.0e-62 240.7 190 74.7
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 2.0e-61 239.6 160 82.5
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 3.4e-61 238.8 157 83.4
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 3.4e-61 238.8 180 75.0
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 4.5e-61 238.4 195 72.8
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 1.3e-60 236.9 195 72.3
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 1.3e-60 236.9 199 71.4
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 1.7e-60 236.5 194 70.6
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 5.0e-60 235.0 167 78.4
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 5.0e-60 235.0 167 78.4
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 6.5e-60 234.6 158 81.0
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 1.1e-59 233.8 158 83.5
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 1.4e-59 233.4 193 71.5
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 1.4e-59 233.4 165 78.8
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 1.4e-59 233.4 164 78.7
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 1.4e-59 233.4 188 71.3
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 1.4e-59 233.4 189 69.8
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 1.9e-59 233.0 191 71.7
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 3.2e-59 232.3 195 70.3
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 4.2e-59 231.9 187 72.2
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 9.4e-59 230.7 151 83.4
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.2e-58 230.3 169 76.3
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 1.2e-58 230.3 166 77.1
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 1.6e-58 229.9 162 78.4
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.6e-58 229.9 159 78.0
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 1.6e-58 229.9 193 70.5
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 2.1e-58 229.6 190 72.6
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 2.1e-58 229.6 188 70.7
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.6e-58 228.8 189 68.8
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 4.6e-58 228.4 161 77.6
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 4.6e-58 228.4 169 76.3
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 4.6e-58 228.4 160 78.8
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 7.9e-58 227.6 189 68.8
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 7.9e-58 227.6 189 68.8
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 7.9e-58 227.6 186 69.9
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 1.0e-57 227.3 201 68.2
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 1.4e-57 226.9 166 78.3
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 1.8e-57 226.5 191 70.2
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.8e-57 226.5 156 80.8
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 1.8e-57 226.5 192 68.2
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 1.8e-57 226.5 170 75.3
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 3.0e-57 225.7 166 77.7
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 3.0e-57 225.7 196 67.9
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 3.0e-57 225.7 178 71.9
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 3.9e-57 225.3 161 75.8
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 3.9e-57 225.3 161 75.8
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 5.1e-57 224.9 189 67.7
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 5.1e-57 224.9 158 76.6
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 6.7e-57 224.6 161 74.5
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 6.7e-57 224.6 170 74.1
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 8.8e-57 224.2 161 75.2
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 8.8e-57 224.2 160 77.5
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 8.8e-57 224.2 189 67.7
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 8.8e-57 224.2 197 67.0
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.1e-56 223.8 191 66.0
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 1.1e-56 223.8 191 66.0
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 1.5e-56 223.4 159 78.0
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 2.5e-56 222.6 160 75.6
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 2.5e-56 222.6 160 76.9
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 3.3e-56 222.2 191 66.5
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 3.3e-56 222.2 182 70.3
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 9.7e-56 220.7 192 66.1
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 9.7e-56 220.7 192 66.1
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 9.7e-56 220.7 164 75.0
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 9.7e-56 220.7 194 68.0
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 9.7e-56 220.7 161 73.9
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 1.3e-55 220.3 164 73.2
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.3e-55 220.3 156 78.8
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.7e-55 219.9 191 70.7
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 2.8e-55 219.2 173 69.4
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 4.8e-55 218.4 168 71.4
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 6.3e-55 218.0 183 69.4
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 8.2e-55 217.6 184 67.9
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 1.1e-54 217.2 188 66.5
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 1.1e-54 217.2 155 76.1
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 1.8e-54 216.5 190 66.8
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 3.1e-54 215.7 190 66.8
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 4.1e-54 215.3 188 67.6
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 6.9e-54 214.5 194 64.4
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 9.1e-54 214.2 162 72.2
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 1.2e-53 213.8 201 63.7
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 1.2e-53 213.8 160 71.9
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 1.2e-53 213.8 172 68.0
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 2.0e-53 213.0 202 64.4
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 2.0e-53 213.0 177 70.6
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 2.6e-53 212.6 178 69.7
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 2.6e-53 212.6 164 72.6
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 2.6e-53 212.6 167 71.3
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 3.4e-53 212.2 196 62.8
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 3.4e-53 212.2 187 67.4
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 4.5e-53 211.8 149 76.5
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 4.5e-53 211.8 151 76.2
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 1.0e-52 210.7 149 78.5
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 1.3e-52 210.3 149 77.9
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 1.7e-52 209.9 187 66.8
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 1.2e-50 203.8 166 68.7
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 2.3e-49 199.5 155 71.0
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 2.6e-48 196.1 164 67.7
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 9.7e-48 194.1 132 78.0
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 2.2e-47 193.0 197 61.4
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 2.2e-47 193.0 146 71.2
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 2.8e-47 192.6 151 70.9
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 1.1e-46 190.7 182 63.2
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 4.1e-46 188.7 150 66.0
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 7.0e-46 188.0 144 68.8
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 6.5e-44 181.4 121 81.8
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 8.5e-44 181.0 132 75.0
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 4.7e-42 175.3 117 82.1
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 6.1e-42 174.9 139 69.8
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 5.2e-41 171.8 119 78.2
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 2.4e-38 162.9 171 55.0
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 7.7e-37 157.9 111 76.6
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 8.5e-36 154.5 132 61.4
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 5.2e-33 145.2 142 54.2
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 1.2e-32 144.1 164 56.7
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 2.0e-32 143.3 120 67.5
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 3.3e-32 142.5 136 59.6
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 7.0e-30 134.8 85 87.1
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.0e-29 133.3 90 83.3
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 2.7e-29 132.9 85 85.9
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 8.8e-25 117.9 88 71.6
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 1.5e-24 117.1 92 71.7
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.1e-22 110.9 99 69.7
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 2.0e-21 106.7 102 61.8
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 2.7e-21 106.3 80 71.2
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 8.9e-17 91.3 54 77.8
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 6.4e-07 58.5 109 34.9


User provided reference genes

Program Settings