Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 8.1e-49 196.8 104 100.0
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 1.9e-37 159.1 101 80.2
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 3.2e-37 158.3 102 80.4
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 2.1e-36 155.6 100 80.0
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 3.5e-36 154.8 102 74.5
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 4.6e-36 154.5 102 73.5
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 7.9e-36 153.7 102 77.5
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 7.9e-36 153.7 102 75.5
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.3e-35 152.9 102 73.5
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 5.1e-35 151.0 102 74.5
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 6.7e-35 150.6 97 79.4
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.5e-34 149.4 101 75.2
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 1.9e-34 149.1 102 73.5
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 2.5e-34 148.7 101 76.2
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 3.3e-34 148.3 102 73.5
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 4.3e-34 147.9 102 75.5
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 5.6e-34 147.5 99 75.8
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 7.4e-34 147.1 102 73.5
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 7.4e-34 147.1 102 74.5
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 1.3e-33 146.4 101 72.3
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 2.1e-33 145.6 101 70.3
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 2.8e-33 145.2 99 72.7
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 3.7e-33 144.8 99 75.8
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 3.7e-33 144.8 99 71.7
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 3.7e-33 144.8 97 76.3
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 8.1e-33 143.7 101 75.2
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 1.1e-32 143.3 98 72.4
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 1.1e-32 143.3 101 67.3
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 1.1e-32 143.3 98 74.5
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 2.4e-32 142.1 102 72.5
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 2.4e-32 142.1 102 68.6
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 3.1e-32 141.7 98 73.5
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 4.0e-32 141.4 102 72.5
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 9.0e-32 140.2 101 67.3
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 1.2e-31 139.8 102 70.6
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 1.2e-31 139.8 97 74.2
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.2e-31 139.8 97 74.2
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 1.2e-31 139.8 99 71.7
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 1.5e-31 139.4 103 69.9
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 2.0e-31 139.0 103 68.0
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 2.0e-31 139.0 97 73.2
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 2.6e-31 138.7 102 66.7
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 3.4e-31 138.3 100 70.0
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 3.4e-31 138.3 102 66.7
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 3.4e-31 138.3 98 71.4
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.4e-31 138.3 97 73.2
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.4e-31 138.3 97 73.2
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.4e-31 138.3 96 74.0
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 4.5e-31 137.9 101 69.3
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 4.5e-31 137.9 98 72.4
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 7.6e-31 137.1 98 71.4
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 7.6e-31 137.1 102 68.6
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 7.6e-31 137.1 103 68.9
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 7.6e-31 137.1 94 76.6
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 7.6e-31 137.1 98 71.4
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 1.0e-30 136.7 101 66.3
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 1.0e-30 136.7 101 66.3
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.0e-30 136.7 102 67.6
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 1.3e-30 136.3 102 66.7
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 1.3e-30 136.3 96 71.9
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.3e-30 136.3 98 70.4
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.3e-30 136.3 98 70.4
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 2.2e-30 135.6 102 68.6
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 2.2e-30 135.6 102 66.7
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 2.2e-30 135.6 98 69.4
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 2.2e-30 135.6 101 70.3
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 2.2e-30 135.6 102 69.6
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 2.9e-30 135.2 97 70.1
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 6.5e-30 134.0 98 68.4
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 6.5e-30 134.0 103 68.9
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 8.4e-30 133.7 102 69.6
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 1.1e-29 133.3 100 66.0
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 1.1e-29 133.3 102 68.6
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 1.4e-29 132.9 102 68.6
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 1.4e-29 132.9 102 68.6
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 3.2e-29 131.7 98 68.4
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 3.2e-29 131.7 98 68.4
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 4.2e-29 131.3 102 67.6
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 4.2e-29 131.3 102 67.6
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 4.2e-29 131.3 102 67.6
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 4.2e-29 131.3 102 67.6
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 4.2e-29 131.3 102 67.6
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 4.2e-29 131.3 103 66.0
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 5.5e-29 131.0 102 65.7
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 5.5e-29 131.0 102 64.7
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 7.1e-29 130.6 102 66.7
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 7.1e-29 130.6 114 65.8
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 1.2e-28 129.8 102 65.7
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 1.2e-28 129.8 97 68.0
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 3.5e-28 128.3 101 67.3
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 2.3e-27 125.6 102 67.6
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 2.3e-27 125.6 103 61.2
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 3.9e-27 124.8 101 65.3
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 1.1e-26 123.2 80 76.2
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 1.9e-26 122.5 102 65.7
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 5.7e-26 120.9 103 60.2
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 1.6e-25 119.4 80 73.8
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 4.8e-25 117.9 98 60.2
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 1.4e-24 116.3 80 76.2
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 3.1e-24 115.2 80 76.2
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 9.0e-24 113.6 97 57.7
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 1.2e-23 113.2 97 56.7
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 2.6e-23 112.1 152 48.7
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 7.6e-23 110.5 77 72.7
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.0e-22 110.2 79 69.6
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.9e-22 108.6 81 69.1
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 5.0e-22 107.8 80 68.8
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 8.4e-22 107.1 101 58.4
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 1.1e-21 106.7 98 58.2
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 1.2e-20 103.2 100 52.0
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 2.1e-20 102.4 98 55.1
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 3.5e-20 101.7 98 56.1
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 1.8e-19 99.4 81 63.0
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 3.9e-19 98.2 79 62.0
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 6.7e-19 97.4 171 37.4
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 8.7e-19 97.1 74 64.9
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 2.5e-18 95.5 78 64.1
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 1.1e-16 90.1 91 51.6
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 1.8e-16 89.4 74 63.5
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 6.9e-16 87.4 92 50.0
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 1.7e-14 82.8 94 47.9
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 3.6e-12 75.1 55 69.1
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 5.1e-11 71.2 51 66.7
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 5.1e-11 71.2 51 66.7
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 1.5e-07 59.7 72 43.1
Cre07.g332150 Chlamydomonas reinhardtii HOM05D002674 ORTHO05D008041 5.9e-07 57.8 89 37.1
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 1.0e-06 57.0 50 52.0
PSO832G3862 Papaver somniferum HOM05D001297 ORTHO05D001135 2.9e-06 55.5 77 40.3


User provided reference genes

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