Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G0508 Punica granatum HOM05D006472 ORTHO05D008222 0.0e+00 1362.4 704 100.0
Cfa011860 Carpinus fangiana HOM05D006472 ORTHO05D008222 7.1e-298 1026.9 727 72.8
TAR369G0765 Trochodendron aralioides HOM05D006472 ORTHO05D008222 7.6e-292 1006.9 723 72.6
GSVIVG01024525001 Vitis vinifera HOM05D006472 ORTHO05D008222 1.4e-290 1002.7 727 72.6
CiPaw.13G059900 Carya illinoinensis HOM05D006472 ORTHO05D008222 7.1e-290 1000.3 727 72.2
QL01p023614 Quercus lobata HOM05D006472 ORTHO05D008222 6.0e-289 997.3 727 71.0
Eucgr.J01848 Eucalyptus grandis HOM05D006472 ORTHO05D008222 1.1e-287 993.0 725 71.9
Prupe.6G038300 Prunus persica HOM05D006472 ORTHO05D008222 3.3e-287 991.5 727 71.0
Nn5g26767 Nelumbo nucifera HOM05D006472 ORTHO05D008222 7.4e-287 990.3 727 71.4
MELO3C013696.2 Cucumis melo HOM05D006472 ORTHO05D008222 1.2e-284 983.0 727 71.1
CSS0014639 Camellia sinensis var. sinensis HOM05D006472 ORTHO05D008222 7.2e-282 973.8 728 70.5
Glyma.02G238400 Glycine max HOM05D006472 ORTHO05D008222 1.2e-281 973.0 727 69.5
Haze_24495 Corylus avellana HOM05D006472 ORTHO05D008222 2.1e-281 972.2 835 62.9
FAN25G3237 Fragaria x ananassa HOM05D006472 ORTHO05D008222 4.6e-281 971.1 711 70.5
Phvul.008G243600 Phaseolus vulgaris HOM05D006472 ORTHO05D008222 4.6e-281 971.1 727 69.2
Glyma.14G207300 Glycine max HOM05D006472 ORTHO05D008222 7.9e-281 970.3 727 69.2
CANSAT54G2825 Cannabis sativa HOM05D006472 ORTHO05D008222 1.0e-280 969.9 729 69.0
MD03G1047100 Malus domestica HOM05D006472 ORTHO05D008222 6.7e-280 967.2 727 69.7
FAN16G1417 Fragaria x ananassa HOM05D006472 ORTHO05D008222 5.7e-279 964.1 728 69.0
FvH4_3g41130 Fragaria vesca HOM05D006472 ORTHO05D008222 7.4e-279 963.8 728 69.0
FAN11G3159 Fragaria x ananassa HOM05D006472 ORTHO05D008222 1.3e-278 963.0 728 68.8
Atru.chr10.2355 Acer truncatum HOM05D006472 ORTHO05D008222 8.2e-278 960.3 727 69.6
Potri.019G133000 Populus trichocarpa HOM05D006472 ORTHO05D008222 8.2e-278 960.3 728 69.2
Actinidia34511 Actinidia chinensis HOM05D006472 ORTHO05D008222 1.8e-277 959.1 727 69.6
Sabra19G0129200 Salix brachista HOM05D006472 ORTHO05D008222 6.9e-277 957.2 738 68.6
Dinv28760 Davidia involucrata HOM05D006472 ORTHO05D008222 2.0e-276 955.7 703 71.8
RcHm_v2.0_Chr5g0073921 Rosa chinensis HOM05D006472 ORTHO05D008222 2.6e-276 955.3 728 68.4
VMungo0647G2416 Vigna mungo HOM05D006472 ORTHO05D008222 4.5e-276 954.5 727 68.2
FAN21G1719 Fragaria x ananassa HOM05D006472 ORTHO05D008222 1.0e-275 953.4 728 68.3
Lalb_Chr10g0103951 Lupinus albus HOM05D006472 ORTHO05D008222 5.0e-275 951.0 728 68.0
Manes.18G123800 Manihot esculenta HOM05D006472 ORTHO05D008222 8.5e-275 950.3 727 68.9
Ca_05732_v3 Cicer arietinum L. HOM05D006472 ORTHO05D008222 3.9e-272 941.4 729 66.4
vmacro14657 Vaccinium macrocarpon HOM05D006472 ORTHO05D008222 1.5e-271 939.5 727 68.5
Thecc.09G366100 Theobroma cacao HOM05D006472 ORTHO05D008222 4.4e-271 937.9 733 68.5
LjContig00141g0008115 Lotus japonicus HOM05D006472 ORTHO05D008222 9.7e-271 936.8 725 66.9
TWI31G0750 Tripterygium wilfordii HOM05D006472 ORTHO05D008222 9.1e-269 930.2 725 68.4
Hma1.2p1_0170F.1_g075410 Hydrangea macrophylla HOM05D006472 ORTHO05D008222 2.9e-267 925.2 727 68.6
Medtr5g075970 Medicago truncatula HOM05D006472 ORTHO05D008222 2.9e-267 925.2 724 65.6
PSO339G5368 Papaver somniferum HOM05D006472 ORTHO05D008222 3.2e-266 921.8 725 66.9
PSO384G2469 Papaver somniferum HOM05D006472 ORTHO05D008222 3.2e-266 921.8 725 67.0
HanXRQChr11g0338241 Helianthus annuus HOM05D006472 ORTHO05D008222 4.2e-266 921.4 727 65.5
Rhsim01G0245200 Rhododendron simsii HOM05D006472 ORTHO05D008222 3.6e-265 918.3 796 62.9
TPR.G15403 Trifolium pratense HOM05D006472 ORTHO05D008222 1.8e-264 916.0 713 66.2
COL.COLO4_08158 Corchorus olitorius HOM05D006472 ORTHO05D008222 2.3e-264 915.6 718 67.5
ECA248G1121 Erigeron canadensis HOM05D006472 ORTHO05D008222 5.2e-264 914.4 725 65.4
Lsat_1_v5_gn_5_176920 Lactuca sativa HOM05D006472 ORTHO05D008222 5.2e-264 914.4 727 65.1
EL10Ac8g20566 Beta vulgaris HOM05D006472 ORTHO05D008222 5.7e-263 911.0 727 65.3
Gohir.D03G146000 Gossypium hirsutum HOM05D006472 ORTHO05D008222 6.3e-262 907.5 722 66.5
Aqoxy2G00669 Aquilegia oxysepala HOM05D006472 ORTHO05D008222 2.6e-260 902.1 725 64.8
Solyc09g055340.4 Solanum lycopersicum HOM05D006472 ORTHO05D008222 2.9e-259 898.7 724 64.9
Lj2C1106G3 Lonicera japonica HOM05D006472 ORTHO05D008222 3.8e-259 898.3 727 65.1
Duzib168G0790 Durio zibethinus HOM05D006472 ORTHO05D008222 6.5e-259 897.5 732 66.0
Gohir.A03G022700 Gossypium hirsutum HOM05D006472 ORTHO05D008222 8.5e-259 897.1 718 65.9
CDE07G0456 Ceratophyllum demersum HOM05D006472 ORTHO05D008222 1.1e-258 896.7 727 62.6
AUR62039472 Chenopodium quinoa HOM05D006472 ORTHO05D008222 1.2e-257 893.3 727 65.6
Psat2g049480 Pisum sativum HOM05D006472 ORTHO05D008222 1.7e-254 882.9 727 63.5
Ah.09g233500 Amaranthus hybridus HOM05D006472 ORTHO05D008222 4.1e-253 878.2 722 64.4
Sopen09g017740 Solanum pennellii HOM05D006472 ORTHO05D008222 1.0e-251 873.6 698 65.0
Sed0004215 Sechium edule HOM05D006472 ORTHO05D008222 7.2e-250 867.5 625 72.6
THA.LOC104798389 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 2.1e-249 865.9 726 61.4
Migut.N00711 Erythranthe guttata HOM05D006472 ORTHO05D008222 2.0e-247 859.4 722 63.3
arahy.Tifrunner.gnm1.ann1.LP7W2Z Arachis hypogaea HOM05D006472 ORTHO05D008222 1.1e-245 853.6 715 63.5
SGA_v2.0_scaffold120G33005 Striga asiatica HOM05D006472 ORTHO05D008222 5.9e-244 847.8 735 61.5
Sp6g13540 Schrenkiella parvula HOM05D006472 ORTHO05D008222 1.9e-242 842.8 720 60.3
A10p09080 Brassica napus HOM05D006472 ORTHO05D008222 1.2e-241 840.1 721 60.5
BraA10t42993Z Brassica rapa HOM05D006472 ORTHO05D008222 3.6e-241 838.6 721 60.3
AL8G25600 Arabidopsis lyrata HOM05D006472 ORTHO05D008222 6.1e-241 837.8 720 60.6
BcaB08g35491 Brassica carinata HOM05D006472 ORTHO05D008222 4.0e-240 835.1 720 60.4
arahy.Tifrunner.gnm1.ann1.9899SL Arachis hypogaea HOM05D006472 ORTHO05D008222 2.6e-239 832.4 725 61.5
AT5G51340 Arabidopsis thaliana HOM05D006472 ORTHO05D008222 2.8e-238 828.9 721 59.8
BcaC04g20686 Brassica carinata HOM05D006472 ORTHO05D008222 8.3e-238 827.4 720 59.6
C09p40600 Brassica napus HOM05D006472 ORTHO05D008222 8.3e-238 827.4 720 59.6
BolC9t56942H Brassica oleracea HOM05D006472 ORTHO05D008222 8.3e-238 827.4 720 59.6
Aa31LG3G7830 Aethionema arabicum HOM05D006472 ORTHO05D008222 7.0e-237 824.3 720 59.2
Carub.0008s1136 Capsella rubella HOM05D006472 ORTHO05D008222 1.1e-234 817.0 720 58.2
Sc11g0008920 Simmondsia chinensis HOM05D006472 ORTHO05D008222 1.5e-234 816.6 655 67.0
Thhalv10012792m.g Eutrema salsugineum HOM05D006472 ORTHO05D008222 8.0e-233 810.8 721 58.5
ATR1127G223 Amborella trichopoda HOM05D006472 ORTHO05D008222 2.2e-230 802.7 697 60.7
HPP92_024257 Vanilla planifolia HOM05D006472 ORTHO05D008222 1.5e-226 790.0 721 57.1
HPP92_024263 Vanilla planifolia HOM05D006472 ORTHO05D008222 2.5e-226 789.3 721 57.0
Medtr6g049450 Medicago truncatula HOM05D006472 ORTHO05D008222 4.7e-201 705.3 657 57.2
Zm00001eb193950 Zea mays HOM05D006472 ORTHO05D008222 1.6e-193 680.2 730 52.2
DCAR_012719 Daucus carota HOM05D006472 ORTHO05D008222 2.6e-191 672.9 589 62.0
Ciclev10000965m.g Citrus clementina HOM05D006472 ORTHO05D008222 3.8e-182 642.5 483 68.7
Mapoly0020s0144 Marchantia polymorpha HOM05D006472 ORTHO05D008222 6.5e-174 615.1 664 50.2
SMO119G0519 Selaginella moellendorffii HOM05D006472 ORTHO05D008222 1.6e-172 610.5 682 50.0
unitig_8.g3682 Utricularia gibba HOM05D004101 ORTHO05D005221 1.8e-168 597.0 667 53.1
CsaV3_3G000010 Cucumis sativus L. HOM05D006472 ORTHO05D008222 4.6e-164 582.4 437 70.9
Pp3c10_12710 Physcomitrium patens HOM05D006472 ORTHO05D008222 5.1e-163 578.9 665 48.9
Oeu034746.1 Olea europaea HOM05D006472 ORTHO05D008222 4.1e-160 569.3 470 64.9
Pp3c26_4960 Physcomitrium patens HOM05D006472 ORTHO05D008222 3.4e-159 566.2 670 47.2
Nitab4.5_0002030g0020 Nicotiana tabacum HOM05D006472 ORTHO05D008222 3.8e-158 562.8 585 53.2
THA.LOC104824615 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 2.4e-144 516.9 432 60.0
AUR62041830 Chenopodium quinoa HOM05D006472 ORTHO05D008222 2.2e-137 493.8 510 54.9
AagrBONN_evm.TU.Sc2ySwM_117.3516 Anthoceros agrestis HOM05D006472 ORTHO05D008222 8.3e-137 491.9 666 43.5
Peaxi162Scf00293g00816 Petunia axillaris HOM05D006472 ORTHO05D008222 1.7e-134 484.2 429 61.1
THA.LOC104824654 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 2.9e-126 456.8 394 58.6
CBR_g46787 Chara braunii HOM05D006472 ORTHO05D008222 1.5e-125 454.5 655 40.2
ClCG10G000020 Citrullus lanatus HOM05D006472 ORTHO05D008222 2.6e-122 443.7 380 62.6
ClCG10G000010 Citrullus lanatus HOM05D006472 ORTHO05D008222 8.6e-110 402.1 310 70.0
Cpa.g.sc2.260 Carica papaya HOM05D006472 ORTHO05D008222 1.2e-108 398.3 393 55.2
Cc01_g15530 Coffea canephora HOM05D006472 ORTHO05D008222 4.1e-104 383.3 304 63.8
Os04g0347600 Oryza sativa ssp. japonica HOM05D006472 ORTHO05D008222 4.1e-104 383.3 325 61.8
Cpa.g.sc2.261 Carica papaya HOM05D006472 ORTHO05D008222 2.7e-103 380.6 345 62.0
Nitab4.5_0000195g0150 Nicotiana tabacum HOM05D006472 ORTHO05D008222 1.7e-102 377.9 476 48.1
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 3.2e-96 357.1 550 42.5
CARHR264090 Cardamine hirsuta HOM05D006472 ORTHO05D008222 9.2e-96 355.5 292 64.7
Cc01_g15520 Coffea canephora HOM05D006472 ORTHO05D008222 4.6e-95 353.2 270 67.0
Nn5g26768 Nelumbo nucifera HOM05D006472 ORTHO05D008222 1.5e-90 338.2 216 80.1
Atru.chr10.2358 Acer truncatum HOM05D006472 ORTHO05D008222 3.2e-72 277.3 236 60.6
Nitab4.5_0001025g0010 Nicotiana tabacum HOM05D006472 ORTHO05D008222 1.3e-62 245.4 203 60.1
Ciclev10004061m.g Citrus clementina HOM05D006472 ORTHO05D008222 1.5e-58 231.9 153 76.5
Gorai.003G153200 Gossypium raimondii HOM05D006472 ORTHO05D008222 4.2e-56 223.8 160 73.8
SEGI_25118 Sequoiadendron giganteum HOM05D006472 ORTHO05D008222 5.1e-38 163.7 140 59.3
Haze_06065 Corylus avellana HOM05D000100 ORTHO05D000052 8.2e-36 156.4 148 54.1
MCO15G146 Micromonas commoda HOM05D006472 ORTHO05D008222 8.8e-30 136.3 739 25.0
Peaxi162Scf00293g00815 Petunia axillaris HOM05D006472 ORTHO05D008222 3.8e-25 120.9 104 56.7
SEGI_41332 Sequoiadendron giganteum HOM05D006472 ORTHO05D008222 1.3e-20 105.9 71 76.1
Lsat_1_v5_gn_5_131141 Lactuca sativa HOM05D006472 ORTHO05D008222 1.7e-17 95.5 69 68.1
Actinidia23826 Actinidia chinensis HOM05D006472 ORTHO05D008222 2.4e-11 75.1 66 60.6
Cre12.g532650 Chlamydomonas reinhardtii HOM05D006472 ORTHO05D008222 3.5e-10 71.2 677 22.0
Medtr6g051400 Medicago truncatula HOM05D006472 ORTHO05D008222 4.7e-07 60.8 55 47.3
Medtr5g078560 Medicago truncatula HOM05D006472 ORTHO05D008222 1.0e-06 59.7 59 54.2


User provided reference genes

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