Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 3.6e-146 521.9 298 100.0
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 2.6e-51 206.8 276 51.1
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 3.4e-51 206.5 271 50.9
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 5.4e-49 199.1 276 50.7
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 4.6e-48 196.1 272 51.8
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 1.0e-47 194.9 180 56.1
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 1.7e-47 194.1 269 43.5
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 5.0e-47 192.6 182 54.4
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 4.7e-45 186.0 187 54.5
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 4.7e-45 186.0 182 50.0
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 2.3e-44 183.7 272 47.8
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 6.8e-44 182.2 189 51.9
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 1.5e-43 181.0 189 50.8
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 2.6e-43 180.3 244 48.8
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 2.6e-43 180.3 244 48.8
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 5.8e-43 179.1 277 44.0
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 7.5e-43 178.7 182 52.2
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 7.5e-43 178.7 202 51.0
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 9.8e-43 178.3 180 51.1
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 2.2e-42 177.2 280 49.3
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 2.2e-42 177.2 180 51.1
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.9e-41 174.1 180 50.0
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 4.1e-41 172.9 252 47.6
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 1.6e-40 171.0 175 52.0
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 1.6e-40 171.0 178 47.8
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 2.7e-40 170.2 191 48.2
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 4.6e-40 169.5 173 46.8
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 7.8e-40 168.7 175 53.7
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 1.7e-39 167.5 172 52.3
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 3.0e-39 166.8 174 53.4
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 3.0e-39 166.8 174 53.4
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 3.0e-39 166.8 258 40.3
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 5.1e-39 166.0 186 47.8
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 8.6e-39 165.2 247 40.5
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 8.6e-39 165.2 171 45.0
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 1.5e-38 164.5 170 53.5
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 2.5e-38 163.7 176 51.1
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 2.5e-38 163.7 173 44.5
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 3.3e-38 163.3 174 51.7
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 4.3e-38 162.9 179 48.0
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 7.3e-38 162.2 201 42.3
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 9.5e-38 161.8 172 48.3
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 2.1e-37 160.6 170 50.6
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 2.8e-37 160.2 176 47.7
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 3.6e-37 159.8 257 39.3
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 6.2e-37 159.1 181 48.1
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 8.1e-37 158.7 263 38.4
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 1.8e-36 157.5 175 48.0
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 1.8e-36 157.5 190 42.6
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 1.8e-36 157.5 188 43.1
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 1.8e-36 157.5 188 43.6
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 2.3e-36 157.1 279 40.9
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 2.3e-36 157.1 173 42.8
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 1.2e-35 154.8 191 42.4
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 2.6e-35 153.7 177 44.6
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 2.6e-35 153.7 242 38.4
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 4.4e-35 152.9 271 39.9
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 5.8e-35 152.5 275 36.4
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 7.6e-35 152.1 259 39.0
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 7.6e-35 152.1 203 42.4
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 9.9e-35 151.8 185 46.5
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 9.9e-35 151.8 253 49.0
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 1.3e-34 151.4 205 42.4
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 1.7e-34 151.0 269 46.1
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 2.9e-34 150.2 203 41.9
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 4.9e-34 149.4 193 42.0
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 6.4e-34 149.1 281 35.9
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 2.4e-33 147.1 258 43.4
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 5.4e-33 146.0 287 40.1
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 7.1e-33 145.6 174 44.3
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 9.2e-33 145.2 179 42.5
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 1.2e-32 144.8 180 45.6
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 1.6e-32 144.4 281 38.1
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 1.6e-32 144.4 268 36.2
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 4.6e-32 142.9 188 41.5
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 6.0e-32 142.5 175 42.9
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 7.8e-32 142.1 268 45.5
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 1.7e-31 141.0 239 49.0
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 3.0e-31 140.2 239 49.4
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 8.6e-31 138.7 215 36.7
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 1.1e-30 138.3 267 34.5
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 9.6e-30 135.2 183 40.4
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 1.2e-27 128.3 196 38.3
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 4.4e-27 126.3 236 36.0
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 2.3e-23 114.0 163 44.2
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 3.0e-23 113.6 173 42.8
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 5.1e-23 112.8 134 42.5
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 5.1e-23 112.8 227 36.6
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 8.7e-23 112.1 202 36.6
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 4.8e-21 106.3 123 43.9
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 1.8e-20 104.4 226 35.8
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 1.0e-15 88.6 105 43.8
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 9.6e-14 82.0 92 45.7
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 6.9e-12 75.9 183 33.3
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 1.2e-11 75.1 110 41.8
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 6.0e-08 62.8 112 33.9
Mapoly0028s0047 Marchantia polymorpha HOM05D007444 ORTHO05D009359 7.4e-06 55.8 145 30.3


User provided reference genes

Program Settings