Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 8.4e-105 383.6 187 100.0
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 2.7e-50 202.6 179 54.7
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 4.5e-50 201.8 184 54.3
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 5.9e-50 201.4 166 57.8
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 2.2e-49 199.5 182 55.5
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 1.6e-47 193.4 174 54.0
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.0e-46 190.7 179 53.1
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 1.4e-46 190.3 167 56.9
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 1.4e-46 190.3 173 57.2
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 1.8e-46 189.9 179 53.1
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 3.0e-46 189.1 167 56.3
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 4.0e-46 188.7 176 54.5
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 5.2e-46 188.3 177 53.1
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 5.2e-46 188.3 167 55.1
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 5.2e-46 188.3 167 55.1
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 6.8e-46 188.0 169 54.4
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 8.8e-46 187.6 175 53.7
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 1.2e-45 187.2 163 55.8
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 1.5e-45 186.8 167 56.9
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 4.4e-45 185.3 176 51.1
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 9.8e-45 184.1 184 51.6
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 3.7e-44 182.2 172 54.1
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 3.7e-44 182.2 170 55.3
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 3.7e-44 182.2 167 53.9
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 3.7e-44 182.2 169 52.1
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 4.9e-44 181.8 168 52.4
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 4.9e-44 181.8 166 53.0
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 8.3e-44 181.0 167 53.9
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 1.1e-43 180.6 172 52.3
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 1.8e-43 179.9 174 54.6
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 3.1e-43 179.1 166 52.4
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 4.1e-43 178.7 168 53.6
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 4.1e-43 178.7 166 51.8
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 9.1e-43 177.6 166 54.2
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 2.0e-42 176.4 168 51.2
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 2.0e-42 176.4 177 49.7
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 2.7e-42 176.0 166 51.8
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 3.5e-42 175.6 166 54.2
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 4.5e-42 175.3 172 54.7
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 5.9e-42 174.9 178 50.6
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 7.7e-42 174.5 189 49.2
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 1.0e-41 174.1 168 49.4
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 1.0e-41 174.1 172 54.1
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 1.0e-41 174.1 189 49.2
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 1.3e-41 173.7 167 52.1
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 1.3e-41 173.7 174 51.7
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 2.3e-41 172.9 173 50.9
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 2.3e-41 172.9 173 53.2
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 6.6e-41 171.4 168 54.8
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 6.6e-41 171.4 174 50.0
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 1.1e-40 170.6 164 52.4
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 1.1e-40 170.6 176 51.1
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 1.9e-40 169.9 167 53.9
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 3.3e-40 169.1 166 51.8
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 3.3e-40 169.1 170 48.2
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 4.3e-40 168.7 174 48.3
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 4.3e-40 168.7 215 43.7
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 7.2e-40 167.9 169 53.8
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 7.2e-40 167.9 166 53.0
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 9.5e-40 167.5 174 48.9
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 9.5e-40 167.5 167 48.5
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 9.5e-40 167.5 174 48.3
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 1.6e-39 166.8 174 50.0
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 1.6e-39 166.8 181 48.6
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 4.7e-39 165.2 168 51.8
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 1.8e-38 163.3 164 50.0
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 1.8e-38 163.3 164 50.0
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 1.8e-38 163.3 175 46.3
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 4.0e-38 162.2 165 50.9
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 5.2e-38 161.8 170 47.6
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 8.9e-38 161.0 165 51.5
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 8.9e-38 161.0 165 51.5
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 1.5e-37 160.2 165 49.7
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 2.6e-37 159.5 166 51.2
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 2.6e-37 159.5 168 52.4
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 2.6e-37 159.5 168 52.4
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 2.6e-37 159.5 175 46.9
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 3.4e-37 159.1 170 51.2
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 4.4e-37 158.7 165 49.1
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 5.7e-37 158.3 166 49.4
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 7.5e-37 157.9 172 44.8
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 3.2e-35 152.5 166 50.0
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 1.6e-34 150.2 168 48.8
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 1.0e-33 147.5 175 44.6
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 6.6e-33 144.8 145 51.7
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 8.6e-33 144.4 171 45.0
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 1.1e-32 144.1 103 66.0
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 3.3e-32 142.5 94 64.9
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 2.1e-31 139.8 106 62.3
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 6.2e-31 138.3 180 42.8
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 3.1e-30 136.0 161 42.9
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 4.0e-30 135.6 197 40.6
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 4.0e-30 135.6 172 43.0
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 7.5e-29 131.3 164 43.3
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 1.7e-28 130.2 165 43.6
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 8.3e-28 127.9 176 43.2
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 3.2e-27 125.9 87 62.1
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 5.4e-27 125.2 167 43.1
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 7.0e-27 124.8 225 37.3
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 1.6e-26 123.6 117 52.1
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 7.8e-26 121.3 155 44.5
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 1.7e-25 120.2 172 42.4
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 5.0e-25 118.6 129 48.1
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 6.6e-25 118.2 87 62.1
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 8.6e-25 117.9 154 39.0
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 2.1e-23 113.2 187 39.6
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 2.1e-23 113.2 187 39.6
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 6.2e-23 111.7 168 38.7
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 2.3e-22 109.8 80 65.0
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 2.2e-20 103.2 89 51.7
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 8.3e-20 101.3 154 36.4
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 2.4e-19 99.8 97 48.5
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 9.2e-19 97.8 76 56.6
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 1.6e-18 97.1 77 55.8
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.2e-13 80.9 89 48.3
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 1.2e-13 80.9 150 36.7
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 9.9e-13 77.8 67 55.2
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 1.3e-12 77.4 112 37.5
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 4.9e-12 75.5 81 51.9


User provided reference genes

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