Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G0143 Punica granatum HOM05D004498 ORTHO05D005300 8.0e-269 929.9 474 100.0
Atru.chr1.817 Acer truncatum HOM05D004498 ORTHO05D005300 7.9e-192 674.1 466 74.7
Eucgr.G03077 Eucalyptus grandis HOM05D004498 ORTHO05D005300 9.6e-190 667.2 457 75.5
QL09p005249 Quercus lobata HOM05D004498 ORTHO05D005300 2.9e-186 655.6 458 74.0
CiPaw.03G020300 Carya illinoinensis HOM05D004498 ORTHO05D005300 6.1e-184 647.9 471 71.5
Cfa008145 Carpinus fangiana HOM05D004498 ORTHO05D005300 7.9e-184 647.5 466 73.0
Ciclev10004737m.g Citrus clementina HOM05D004498 ORTHO05D005300 1.3e-183 646.7 453 74.0
Potri.001G126200 Populus trichocarpa HOM05D004498 ORTHO05D005300 7.4e-182 641.0 452 74.3
Gohir.A12G197600 Gossypium hirsutum HOM05D004498 ORTHO05D005300 8.2e-181 637.5 470 70.6
Gorai.008G215300 Gossypium raimondii HOM05D004498 ORTHO05D005300 8.2e-181 637.5 471 70.3
Gohir.D12G200100 Gossypium hirsutum HOM05D004498 ORTHO05D005300 3.1e-180 635.6 473 70.4
Manes.14G037200 Manihot esculenta HOM05D004498 ORTHO05D005300 9.1e-180 634.0 452 73.5
ClCG07G016840 Citrullus lanatus HOM05D004498 ORTHO05D005300 1.2e-179 633.6 466 70.6
COL.COLO4_14097 Corchorus olitorius HOM05D004498 ORTHO05D005300 4.5e-179 631.7 471 70.3
Thecc.03G153100 Theobroma cacao HOM05D004498 ORTHO05D005300 7.7e-179 630.9 451 73.8
TAR375G0984 Trochodendron aralioides HOM05D004498 ORTHO05D005300 7.7e-179 630.9 475 69.7
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla HOM05D004498 ORTHO05D005300 5.0e-178 628.2 459 71.7
Actinidia24991 Actinidia chinensis HOM05D004498 ORTHO05D005300 1.1e-177 627.1 460 71.5
Lalb_Chr04g0258171 Lupinus albus HOM05D004498 ORTHO05D005300 1.4e-177 626.7 456 71.5
Sed0003630 Sechium edule HOM05D004498 ORTHO05D005300 2.5e-177 625.9 459 70.6
Glyma.09G230400 Glycine max HOM05D004498 ORTHO05D005300 2.1e-176 622.9 454 70.7
CsaV3_4G004040 Cucumis sativus L. HOM05D004498 ORTHO05D005300 2.3e-175 619.4 466 69.1
Migut.D02110 Erythranthe guttata HOM05D004498 ORTHO05D005300 3.0e-175 619.0 457 70.7
THA.LOC104819414 Tarenaya hassleriana HOM05D004498 ORTHO05D005300 3.0e-175 619.0 459 70.8
Rhsim03G0165600 Rhododendron simsii HOM05D004498 ORTHO05D005300 3.9e-175 618.6 484 68.8
Glyma.12G006200 Glycine max HOM05D004498 ORTHO05D005300 5.1e-175 618.2 454 70.0
Lj3g0015680 Lotus japonicus HOM05D004498 ORTHO05D005300 5.1e-175 618.2 459 71.2
Thhalv10013248m.g Eutrema salsugineum HOM05D004498 ORTHO05D005300 1.5e-174 616.7 461 69.6
Ca_02786_v3 Cicer arietinum L. HOM05D004498 ORTHO05D005300 2.0e-174 616.3 457 71.1
Solyc05g051630.4 Solanum lycopersicum HOM05D004498 ORTHO05D005300 4.4e-174 615.1 462 71.9
Migut.G01103 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.3e-173 613.6 459 69.9
PSO210G1345 Papaver somniferum HOM05D004498 ORTHO05D005300 1.7e-173 613.2 471 68.4
Psat6g116600 Pisum sativum HOM05D004498 ORTHO05D005300 1.7e-173 613.2 459 69.5
Sc15g0000230 Simmondsia chinensis HOM05D004498 ORTHO05D005300 1.7e-173 613.2 464 67.5
Sp6g35240 Schrenkiella parvula HOM05D004498 ORTHO05D005300 2.2e-173 612.8 462 68.0
TPR.G3665 Trifolium pratense HOM05D004498 ORTHO05D005300 2.2e-173 612.8 459 69.9
Phvul.011G007100 Phaseolus vulgaris HOM05D004498 ORTHO05D005300 4.8e-173 611.7 458 68.8
PSO210G0611 Papaver somniferum HOM05D004498 ORTHO05D005300 1.8e-172 609.8 471 67.7
Psat6g142360 Pisum sativum HOM05D004498 ORTHO05D005300 6.9e-172 607.8 457 70.2
BcaC06g32495 Brassica carinata HOM05D004498 ORTHO05D005300 2.0e-171 606.3 456 68.9
Aqoxy3G03912 Aquilegia oxysepala HOM05D004498 ORTHO05D005300 2.6e-171 605.9 460 68.3
CAN.G937.4 Capsicum annuum HOM05D004498 ORTHO05D005300 3.4e-171 605.5 457 70.7
Carub.0006s0661 Capsella rubella HOM05D004498 ORTHO05D005300 4.5e-171 605.1 459 67.8
A10p29360 Brassica napus HOM05D004498 ORTHO05D005300 1.3e-170 603.6 461 68.8
BcaB05g21603 Brassica carinata HOM05D004498 ORTHO05D005300 2.2e-170 602.8 460 67.6
BcaC03g13193 Brassica carinata HOM05D004498 ORTHO05D005300 2.2e-170 602.8 460 68.0
Medtr4g036550 Medicago truncatula HOM05D004498 ORTHO05D005300 2.2e-170 602.8 455 69.7
Sabra01G0097300 Salix brachista HOM05D004498 ORTHO05D005300 2.2e-170 602.8 526 62.7
BraA10t44979Z Brassica rapa HOM05D004498 ORTHO05D005300 2.9e-170 602.4 461 68.8
ECA233G4878 Erigeron canadensis HOM05D004498 ORTHO05D005300 1.9e-169 599.7 452 71.2
Cc02_g04430 Coffea canephora HOM05D004498 ORTHO05D005300 7.2e-169 597.8 471 67.7
AL6G17950 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 8.8e-167 590.9 460 66.3
Prupe.6G033300 Prunus persica HOM05D004498 ORTHO05D005300 2.0e-166 589.7 453 68.9
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 5.7e-166 588.2 450 67.8
MD11G1042200 Malus domestica HOM05D004498 ORTHO05D005300 7.4e-166 587.8 453 68.4
HanXRQChr05g0142551 Helianthus annuus HOM05D004498 ORTHO05D005300 4.8e-165 585.1 452 69.5
SalBow7G0508 Salvia bowleyana HOM05D004498 ORTHO05D005300 2.6e-163 579.3 431 70.5
AL3G21620 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 5.9e-163 578.2 458 65.5
AT5G07630 Arabidopsis thaliana HOM05D004498 ORTHO05D005300 2.9e-162 575.9 460 64.3
Lj8A44G33 Lonicera japonica HOM05D004498 ORTHO05D005300 2.9e-162 575.9 424 72.6
vmacro22807 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 1.5e-161 573.5 499 62.9
Dinv16848 Davidia involucrata HOM05D004498 ORTHO05D005300 1.9e-161 573.2 464 67.9
MELO3C017661.2 Cucumis melo HOM05D004498 ORTHO05D005300 4.2e-161 572.0 418 70.6
Nn1g09651 Nelumbo nucifera HOM05D004498 ORTHO05D005300 4.4e-158 562.0 422 70.1
BraA02t04927Z Brassica rapa HOM05D004498 ORTHO05D005300 8.2e-157 557.8 564 55.3
Aa31LG3G18790 Aethionema arabicum HOM05D004498 ORTHO05D005300 1.4e-156 557.0 459 64.1
BolC2t06286H Brassica oleracea HOM05D004498 ORTHO05D005300 9.1e-156 554.3 575 54.4
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 2.7e-155 552.7 510 58.6
Carub.0003s0947 Capsella rubella HOM05D004498 ORTHO05D005300 4.5e-155 552.0 456 64.3
FvH4_3g41750 Fragaria vesca HOM05D004498 ORTHO05D005300 5.9e-155 551.6 472 62.7
Nitab4.5_0001187g0110 Nicotiana tabacum HOM05D004498 ORTHO05D005300 7.7e-155 551.2 461 66.2
GSVIVG01014038001 Vitis vinifera HOM05D004498 ORTHO05D005300 2.2e-154 549.7 457 63.0
TWI23G0902 Tripterygium wilfordii HOM05D004498 ORTHO05D005300 1.1e-153 547.4 412 69.4
RcHm_v2.0_Chr5g0074831 Rosa chinensis HOM05D004498 ORTHO05D005300 3.2e-153 545.8 472 62.1
FAN11G1420 Fragaria x ananassa HOM05D004498 ORTHO05D005300 1.8e-151 540.0 487 61.0
Manes.06G133200 Manihot esculenta HOM05D004498 ORTHO05D005300 2.6e-150 536.2 461 64.2
Hund20838 Selenicereus undatus HOM05D004498 ORTHO05D005300 2.6e-150 536.2 468 61.1
Duzib084G1021 Durio zibethinus HOM05D004498 ORTHO05D005300 2.4e-148 529.6 457 64.6
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea HOM05D004498 ORTHO05D005300 5.4e-148 528.5 416 67.1
ATR0745G086 Amborella trichopoda HOM05D004498 ORTHO05D005300 7.2e-145 518.1 460 60.2
Migut.G01144 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.8e-143 513.5 386 70.2
DCAR_009449 Daucus carota HOM05D004498 ORTHO05D005300 4.0e-143 512.3 463 60.0
FAN16G2392 Fragaria x ananassa HOM05D004498 ORTHO05D005300 5.7e-142 508.4 471 58.8
CSS0042388 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 2.8e-141 506.1 380 69.2
AUR62009833 Chenopodium quinoa HOM05D004498 ORTHO05D005300 1.5e-137 493.8 382 66.5
FAN25G1514 Fragaria x ananassa HOM05D004498 ORTHO05D005300 4.0e-135 485.7 510 54.5
Lsat_1_v5_gn_8_10281 Lactuca sativa HOM05D004498 ORTHO05D005300 2.4e-132 476.5 382 67.8
Sopen05g030080 Solanum pennellii HOM05D004498 ORTHO05D005300 3.9e-130 469.2 365 70.4
SHI13988 Sapria himalayana HOM05D004498 ORTHO05D005300 2.8e-128 463.0 461 56.6
HPP92_003455 Vanilla planifolia HOM05D004498 ORTHO05D005300 5.2e-127 458.8 452 56.0
SGA_v2.0_scaffold115G32141 Striga asiatica HOM05D004498 ORTHO05D005300 2.2e-125 453.4 511 53.2
SGA_v2.0_scaffold92G28289 Striga asiatica HOM05D004498 ORTHO05D005300 1.4e-124 450.7 375 64.8
EL10Ac7g16351 Beta vulgaris HOM05D004498 ORTHO05D005300 4.1e-124 449.1 527 51.0
arahy.Tifrunner.gnm1.ann1.V9VPQR Arachis hypogaea HOM05D004498 ORTHO05D005300 4.6e-123 445.7 397 61.2
Dinv06575 Davidia involucrata HOM05D004498 ORTHO05D005300 1.6e-120 437.2 390 63.6
Zm00001eb105090 Zea mays HOM05D004498 ORTHO05D005300 1.5e-118 430.6 405 56.8
FAN21G3639 Fragaria x ananassa HOM05D004498 ORTHO05D005300 3.4e-118 429.5 380 61.3
Peaxi162Scf00167g00733 Petunia axillaris HOM05D004498 ORTHO05D005300 7.8e-115 418.3 369 63.4
unitig_578.g16611 Utricularia gibba HOM05D004498 ORTHO05D005300 7.3e-113 411.8 383 58.7
Mapoly0124s0016 Marchantia polymorpha HOM05D004498 ORTHO05D005300 4.7e-112 409.1 459 48.6
Rhsim07G0010200 Rhododendron simsii HOM05D004498 ORTHO05D005300 4.0e-111 406.0 341 66.0
Oeu022469.1 Olea europaea HOM05D004498 ORTHO05D005300 2.6e-110 403.3 290 71.7
BolC9t59715H Brassica oleracea HOM05D004498 ORTHO05D005300 8.4e-109 398.3 419 56.1
C09p69720 Brassica napus HOM05D004498 ORTHO05D005300 3.9e-106 389.4 325 64.6
Nitab4.5_0002764g0030 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.2e-101 373.6 365 60.5
Pp3c18_8280 Physcomitrium patens HOM05D004498 ORTHO05D005300 1.9e-100 370.5 419 49.4
SMO200G0031 Selaginella moellendorffii HOM05D004498 ORTHO05D005300 1.1e-97 361.3 431 46.2
CARHR205520 Cardamine hirsuta HOM05D004498 ORTHO05D005300 3.8e-93 346.3 251 70.5
GSVIVG01037114001 Vitis vinifera HOM05D004498 ORTHO05D005300 3.5e-91 339.7 332 59.9
Migut.A00970 Erythranthe guttata HOM05D004498 ORTHO05D005300 4.9e-85 319.3 240 70.0
AagrBONN_evm.TU.Sc2ySwM_362.1167 Anthoceros agrestis HOM05D004498 ORTHO05D005300 1.2e-83 314.7 402 45.8
arahy.Tifrunner.gnm1.ann1.XAT8RN Arachis hypogaea HOM05D004498 ORTHO05D005300 6.0e-75 285.8 328 52.4
Nitab4.5_0000818g0240 Nicotiana tabacum HOM05D004498 ORTHO05D005300 5.0e-69 266.2 283 57.2
CDE02G4122 Ceratophyllum demersum HOM05D004498 ORTHO05D005300 1.2e-62 245.0 198 69.7
Cre11.g467726 Chlamydomonas reinhardtii HOM05D004498 ORTHO05D005300 2.1e-59 234.2 596 32.4
AagrBONN_evm.TU.Sc2ySwM_362.1160 Anthoceros agrestis HOM05D004498 ORTHO05D005300 1.0e-58 231.9 379 40.1
AUR62038145 Chenopodium quinoa HOM05D004498 ORTHO05D005300 1.7e-56 224.6 330 44.2
Oeu042546.1 Olea europaea HOM05D004498 ORTHO05D005300 3.7e-56 223.4 217 61.3
SEGI_20056 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 5.5e-52 209.5 198 56.1
BcaC06g32419 Brassica carinata HOM05D004498 ORTHO05D005300 5.2e-50 203.0 155 64.5
Actinidia13585 Actinidia chinensis HOM05D004498 ORTHO05D005300 1.1e-49 201.8 155 67.7
Nitab4.5_0003647g0080 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.6e-46 190.7 422 35.8
arahy.Tifrunner.gnm1.ann1.BI5KXL Arachis hypogaea HOM05D004498 ORTHO05D005300 5.9e-46 189.5 188 55.3
Migut.G01109 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.6e-43 181.4 129 69.8
MCO14G174 Micromonas commoda HOM05D004498 ORTHO05D005300 6.3e-40 169.5 431 31.6
Sabra03G0074300 Salix brachista HOM05D004498 ORTHO05D005300 3.0e-34 150.6 161 55.3
Os07g0486100 Oryza sativa ssp. japonica HOM05D004498 ORTHO05D005300 8.8e-34 149.1 163 50.3
SEGI_28281 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 1.5e-33 148.3 121 54.5
Nitab4.5_0002764g0040 Nicotiana tabacum HOM05D004498 ORTHO05D005300 6.3e-32 142.9 102 71.6
PGSC0003DMG401007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 1.1e-31 142.1 96 74.0
BcaNung06188 Brassica carinata HOM05D004498 ORTHO05D005300 3.3e-28 130.6 101 62.4
CSS0024530 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 3.3e-28 130.6 86 72.1
PGR142G0681 Punica granatum HOM05D004498 ORTHO05D005300 3.3e-28 130.6 80 87.5
PRCOL_00001376 Prasinoderma coloniale HOM05D004498 ORTHO05D005300 4.7e-27 126.7 509 28.3
FvH4_1g27600 Fragaria vesca HOM05D004498 ORTHO05D005300 4.1e-23 113.6 89 70.8
CARHR084780 Cardamine hirsuta HOM05D004498 ORTHO05D005300 1.6e-19 101.7 72 69.4
Lj3g0020155 Lotus japonicus HOM05D004498 ORTHO05D005300 1.7e-16 91.7 89 60.7
Potri.003G107501 Populus trichocarpa HOM05D004498 ORTHO05D005300 4.1e-15 87.0 68 72.1
Prupe.6G034800 Prunus persica HOM05D004498 ORTHO05D005300 4.1e-15 87.0 57 80.7
SEGI_08016 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 4.1e-15 87.0 96 52.1
SEGI_20600 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 4.1e-15 87.0 96 52.1
SGA_v2.0_scaffold4035G54420 Striga asiatica HOM05D004498 ORTHO05D005300 9.2e-15 85.9 89 51.7
CSS0021614 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 1.0e-13 82.4 51 68.6
SalBow8G0163 Salvia bowleyana HOM05D004498 ORTHO05D005300 2.3e-13 81.3 63 69.8
SalBow8G4260 Salvia bowleyana HOM05D004498 ORTHO05D005300 2.3e-13 81.3 63 69.8
Nitab4.5_0003647g0090 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.5e-12 77.8 47 76.6
Rhsim07G0010100 Rhododendron simsii HOM05D004498 ORTHO05D005300 7.5e-09 66.2 61 59.0
CSS0021260 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 1.9e-07 61.6 55 58.2
AagrBONN_evm.TU.Sc2ySwM_344.4951 Anthoceros agrestis HOM05D004498 ORTHO05D005300 7.0e-07 59.7 108 35.2


User provided reference genes

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