Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 3.4e-62 241.5 124 100.0
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 9.3e-52 206.8 124 84.7
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 2.2e-48 195.7 122 80.3
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 8.2e-48 193.7 122 79.5
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 6.9e-47 190.7 122 77.0
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 9.0e-47 190.3 124 78.2
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 2.0e-46 189.1 122 77.0
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 2.6e-46 188.7 122 77.0
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 2.6e-46 188.7 122 77.0
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 2.6e-46 188.7 122 77.0
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 4.5e-46 188.0 122 77.0
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 5.9e-46 187.6 124 77.4
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 7.7e-46 187.2 121 79.3
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 1.0e-45 186.8 122 77.9
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 1.0e-45 186.8 124 75.0
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 1.3e-45 186.4 122 77.0
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 2.9e-45 185.3 124 76.6
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 3.8e-45 184.9 121 78.5
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 5.0e-45 184.5 124 77.4
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 1.1e-44 183.3 122 74.6
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 1.1e-44 183.3 120 78.3
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 1.1e-44 183.3 125 76.0
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 1.9e-44 182.6 122 73.8
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 2.5e-44 182.2 120 76.7
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 2.5e-44 182.2 120 76.7
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 3.2e-44 181.8 121 77.7
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 3.2e-44 181.8 121 77.7
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 3.2e-44 181.8 120 75.0
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 4.2e-44 181.4 121 77.7
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 5.5e-44 181.0 124 75.0
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 5.5e-44 181.0 122 73.0
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 7.2e-44 180.6 121 76.9
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 7.2e-44 180.6 122 73.8
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 9.4e-44 180.3 122 74.6
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.2e-43 179.9 124 75.0
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 1.2e-43 179.9 126 74.6
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 1.2e-43 179.9 124 75.8
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 2.7e-43 178.7 124 75.0
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 3.6e-43 178.3 127 76.4
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 4.6e-43 177.9 120 74.2
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 6.1e-43 177.6 124 71.8
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 6.1e-43 177.6 120 74.2
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 6.1e-43 177.6 122 75.4
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 1.0e-42 176.8 122 75.4
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 1.4e-42 176.4 124 75.8
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 1.4e-42 176.4 126 74.6
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 1.4e-42 176.4 122 72.1
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 1.8e-42 176.0 123 75.6
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 2.3e-42 175.6 122 73.0
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 2.3e-42 175.6 121 72.7
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 3.0e-42 175.3 123 72.4
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 3.9e-42 174.9 120 76.7
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 3.9e-42 174.9 126 73.8
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 3.9e-42 174.9 123 74.8
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 8.8e-42 173.7 121 73.6
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 8.8e-42 173.7 121 73.6
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.5e-41 172.9 122 73.0
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 2.0e-41 172.6 121 73.6
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 2.0e-41 172.6 126 73.0
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 2.0e-41 172.6 120 75.8
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 2.0e-41 172.6 124 73.4
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 2.5e-41 172.2 122 74.6
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 5.7e-41 171.0 120 74.2
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 9.7e-41 170.2 123 74.0
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 1.7e-40 169.5 119 75.6
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 1.7e-40 169.5 121 75.2
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 2.8e-40 168.7 120 72.5
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 2.8e-40 168.7 121 73.6
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 3.7e-40 168.3 124 71.0
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 4.8e-40 167.9 122 70.5
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 4.8e-40 167.9 122 70.5
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 4.8e-40 167.9 124 70.2
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 6.3e-40 167.5 123 72.4
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 1.1e-39 166.8 122 72.1
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 1.4e-39 166.4 122 70.5
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.4e-39 166.4 121 72.7
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 1.8e-39 166.0 122 70.5
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 1.8e-39 166.0 121 74.4
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 3.1e-39 165.2 124 68.5
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 3.1e-39 165.2 121 71.9
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 3.1e-39 165.2 123 71.5
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 6.9e-39 164.1 124 67.7
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 9.1e-39 163.7 123 70.7
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 1.5e-38 162.9 123 69.1
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 2.0e-38 162.5 124 69.4
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 2.6e-38 162.2 125 68.8
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 2.6e-38 162.2 124 66.9
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 5.9e-38 161.0 123 68.3
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 1.0e-37 160.2 124 66.1
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 1.0e-37 160.2 123 69.9
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 1.3e-37 159.8 123 65.9
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 1.3e-37 159.8 123 69.1
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 1.3e-37 159.8 123 69.1
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 2.9e-37 158.7 123 68.3
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 2.9e-37 158.7 123 65.9
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 3.8e-37 158.3 118 66.9
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 1.1e-36 156.8 124 64.5
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 1.9e-36 156.0 123 64.2
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 4.2e-36 154.8 118 67.8
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 5.5e-36 154.5 128 62.5
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 1.2e-35 153.3 118 66.9
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 1.2e-35 153.3 118 66.9
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 1.2e-35 153.3 118 66.9
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 1.2e-35 153.3 118 66.9
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 1.6e-35 152.9 118 66.9
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 1.6e-35 152.9 118 66.9
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 4.7e-35 151.4 119 65.5
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 1.8e-34 149.4 126 60.3
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 1.8e-34 149.4 127 60.6
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 3.0e-34 148.7 118 65.3
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 3.0e-34 148.7 118 65.3
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 8.5e-29 130.6 122 58.2
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 1.0e-26 123.6 127 51.2
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 3.1e-23 112.1 121 48.8
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 3.5e-22 108.6 110 55.5
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 1.9e-20 102.8 96 56.2
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 8.0e-19 97.4 121 44.6
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 3.0e-18 95.5 115 44.3
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 8.8e-18 94.0 97 48.5
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 4.8e-16 88.2 64 71.9
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 2.1e-11 72.8 119 38.7
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 5.2e-10 68.2 62 56.5
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 5.4e-07 58.2 105 34.3


User provided reference genes

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