Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR119G0103 Punica granatum HOM05D004533 ORTHO05D005347 1.5e-141 506.5 334 100.0
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.5e-27 127.9 347 41.8
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.5e-27 127.9 347 41.8
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 7.4e-27 125.6 345 42.3
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 1.6e-26 124.4 337 41.8
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 2.8e-26 123.6 335 42.4
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.8e-26 123.6 347 41.2
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.7e-26 123.2 348 40.5
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 3.1e-25 120.2 354 40.4
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.0e-24 117.5 352 33.5
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 2.0e-24 117.5 345 41.4
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 4.5e-24 116.3 351 40.5
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 1.2e-21 108.2 349 41.3
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 6.0e-21 105.9 330 40.0
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 3.0e-20 103.6 352 38.6
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 3.9e-20 103.2 346 39.9
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 6.7e-20 102.4 327 41.3
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 1.1e-19 101.7 323 39.6
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 1.1e-19 101.7 351 42.5
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 1.5e-19 101.3 345 36.2
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 5.7e-19 99.4 338 40.5
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 7.4e-19 99.0 354 31.9
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 9.6e-19 98.6 351 39.0
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 1.3e-18 98.2 348 40.8
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 1.6e-18 97.8 340 40.9
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 1.6e-18 97.8 317 36.6
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 6.3e-18 95.9 337 31.2
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 1.1e-17 95.1 363 40.2
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 1.1e-17 95.1 348 37.6
ECA233G1177 Erigeron canadensis HOM05D004533 ORTHO05D005347 1.8e-17 94.4 332 34.9
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 3.1e-17 93.6 342 34.8
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 3.1e-17 93.6 329 32.8
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 5.3e-17 92.8 328 41.2
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 9.0e-17 92.0 354 29.9
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 1.2e-16 91.7 324 38.9
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 1.5e-16 91.3 332 43.4
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 1.5e-16 91.3 349 39.5
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 2.0e-16 90.9 346 38.4
Atru.chr11.1592 Acer truncatum HOM05D004533 ORTHO05D005347 3.4e-16 90.1 363 38.6
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 3.4e-16 90.1 354 33.9
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 4.5e-16 89.7 326 39.0
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 4.5e-16 89.7 326 39.0
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 4.5e-16 89.7 333 34.2
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 5.9e-16 89.4 329 36.5
Lsat_1_v5_gn_4_11700 Lactuca sativa HOM05D004533 ORTHO05D005347 5.9e-16 89.4 330 36.4
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 5.9e-16 89.4 350 28.0
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 5.9e-16 89.4 350 38.6
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 7.6e-16 89.0 335 39.1
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 7.6e-16 89.0 340 38.8
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 1.7e-15 87.8 326 39.0
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 2.2e-15 87.4 294 30.3
Hma1.2p1_0473F.1_g160260 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 2.9e-15 87.0 320 30.9
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 6.5e-15 85.9 333 42.9
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 1.1e-14 85.1 340 33.5
Sabra08G0074200 Salix brachista HOM05D004533 ORTHO05D005347 1.1e-14 85.1 349 38.7
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 1.4e-14 84.7 360 37.5
Aqoxy3G03701 Aquilegia oxysepala HOM05D004533 ORTHO05D005347 1.9e-14 84.3 340 36.2
TWI79G0987 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 1.9e-14 84.3 327 38.2
TAR374G1471 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.9e-14 84.3 281 31.3
Gohir.A12G159800 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.2e-14 83.6 327 38.8
ECA234G4159 Erigeron canadensis HOM05D004533 ORTHO05D005347 4.2e-14 83.2 338 32.8
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 5.5e-14 82.8 336 30.4
MSTRG.7732 Avicennia marina HOM05D004533 ORTHO05D005347 9.3e-14 82.0 344 38.1
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 9.3e-14 82.0 346 35.5
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.2e-13 81.6 312 39.4
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 1.6e-13 81.3 224 47.8
Gohir.D12G163100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.7e-13 80.5 326 37.1
Oeu020361.1 Olea europaea HOM05D004533 ORTHO05D005347 2.7e-13 80.5 309 33.3
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 2.7e-13 80.5 321 32.4
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 6.1e-13 79.3 329 34.7
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 7.9e-13 79.0 361 28.8
MSTRG.13457 Avicennia marina HOM05D004533 ORTHO05D005347 1.8e-12 77.8 334 33.2
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 2.3e-12 77.4 330 27.6
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 3.0e-12 77.0 354 37.0
DCAR_026684 Daucus carota HOM05D004533 ORTHO05D005347 5.1e-12 76.3 344 27.3
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 5.1e-12 76.3 340 38.2
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 6.7e-12 75.9 340 37.6
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 6.7e-12 75.9 338 39.3
TWI31G0640 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 6.7e-12 75.9 324 39.2
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 8.7e-12 75.5 239 31.8
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 8.7e-12 75.5 340 38.2
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 8.7e-12 75.5 340 38.2
DCAR_023748 Daucus carota HOM05D004533 ORTHO05D005347 1.5e-11 74.7 320 32.5
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 1.5e-11 74.7 335 39.4
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 2.5e-11 73.9 338 39.1
TWI75G1153 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 2.5e-11 73.9 330 37.9
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 3.3e-11 73.6 340 37.6
Actinidia19907 Actinidia chinensis HOM05D004533 ORTHO05D005347 9.7e-11 72.0 316 37.7
PGR102G1315 Punica granatum HOM05D004533 ORTHO05D005347 9.7e-11 72.0 329 34.3
Ah.02g126770 Amaranthus hybridus HOM05D004533 ORTHO05D005347 1.6e-10 71.2 345 32.2
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 1.6e-10 71.2 322 28.6
Nitab4.5_0006154g0010 Nicotiana tabacum HOM05D004533 ORTHO05D005347 2.8e-10 70.5 221 44.8
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 6.3e-10 69.3 320 28.8
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 6.3e-10 69.3 203 48.3
ATR0827G049 Amborella trichopoda HOM05D004533 ORTHO05D005347 1.1e-09 68.6 312 33.7
DCAR_030051 Daucus carota HOM05D004533 ORTHO05D005347 1.1e-09 68.6 329 30.1
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 1.8e-09 67.8 327 34.9
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 1.8e-09 67.8 327 34.9
Actinidia16147 Actinidia chinensis HOM05D004533 ORTHO05D005347 2.4e-09 67.4 232 43.5
PGSC0003DMG400028307 Solanum tuberosum HOM05D004533 ORTHO05D005347 9.1e-09 65.5 326 38.7
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 1.5e-08 64.7 389 35.0
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 2.6e-08 63.9 123 35.8
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 2.6e-08 63.9 123 35.8
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 2.6e-08 63.9 123 35.8
A02p15640 Brassica napus HOM05D004533 ORTHO05D005347 3.4e-08 63.5 125 40.8
BraA02t06624Z Brassica rapa HOM05D004533 ORTHO05D005347 3.4e-08 63.5 125 40.8
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 5.9e-08 62.8 116 37.1
Actinidia13399 Actinidia chinensis HOM05D004533 ORTHO05D005347 7.7e-08 62.4 222 44.1
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 7.7e-08 62.4 137 35.8
Ah.03g138730 Amaranthus hybridus HOM05D004533 ORTHO05D005347 1.0e-07 62.0 333 36.0
Sc04g0007440 Simmondsia chinensis HOM05D004533 ORTHO05D005347 1.3e-07 61.6 324 35.2
Solyc05g012030.1 Solanum lycopersicum HOM05D004533 ORTHO05D005347 1.3e-07 61.6 333 33.9
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 1.7e-07 61.2 389 34.4
BcaC03g15057 Brassica carinata HOM05D004533 ORTHO05D005347 1.7e-07 61.2 132 39.4
BolC2t08676H Brassica oleracea HOM05D004533 ORTHO05D005347 1.7e-07 61.2 132 39.4
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 1.7e-07 61.2 135 33.3
C02p26000 Brassica napus HOM05D004533 ORTHO05D005347 2.2e-07 60.8 132 39.4
C06p40740 Brassica napus HOM05D004533 ORTHO05D005347 2.2e-07 60.8 135 33.3
BcaC08g46370 Brassica carinata HOM05D004533 ORTHO05D005347 2.9e-07 60.5 113 37.2
BolC6t39358H Brassica oleracea HOM05D004533 ORTHO05D005347 2.9e-07 60.5 113 37.2
CARHR062030 Cardamine hirsuta HOM05D004533 ORTHO05D005347 2.9e-07 60.5 116 36.2
Sc11g0002570 Simmondsia chinensis HOM05D004533 ORTHO05D005347 2.9e-07 60.5 320 35.0
A07p35490 Brassica napus HOM05D004533 ORTHO05D005347 3.8e-07 60.1 135 32.6
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 5.0e-07 59.7 114 36.8
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 6.5e-07 59.3 340 31.2
Lsat_1_v5_gn_8_45920 Lactuca sativa HOM05D004533 ORTHO05D005347 6.5e-07 59.3 332 32.8
Nn3g17512 Nelumbo nucifera HOM05D004533 ORTHO05D005347 8.5e-07 58.9 118 38.1
Nitab4.5_0000027g0050 Nicotiana tabacum HOM05D004533 ORTHO05D005347 8.5e-07 58.9 203 43.8
Thhalv10018878m.g Eutrema salsugineum HOM05D004533 ORTHO05D005347 1.1e-06 58.5 120 37.5
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 1.4e-06 58.2 116 36.2
Migut.E00039 Erythranthe guttata HOM05D004533 ORTHO05D005347 4.2e-06 56.6 97 37.1
HanXRQChr12g0363201 Helianthus annuus HOM05D004533 ORTHO05D005347 5.5e-06 56.2 130 38.5
SGA_v2.0_scaffold287G47174 Striga asiatica HOM05D004533 ORTHO05D005347 5.5e-06 56.2 324 30.9
PSO782G4709 Papaver somniferum HOM05D004533 ORTHO05D005347 9.4e-06 55.5 115 33.0


User provided reference genes

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