Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR111G0090 Punica granatum HOM05D003165 ORTHO05D003589 2.6e-23 111.3 60 100.0
Medtr4g050880 Medicago truncatula HOM05D003165 ORTHO05D003589 1.2e-20 102.4 62 91.9
HanXRQChr00c0126g0571841 Helianthus annuus HOM05D003165 ORTHO05D003589 2.3e-19 98.2 60 88.3
HanXRQCPg0579761 Helianthus annuus HOM05D003165 ORTHO05D003589 2.3e-19 98.2 60 88.3
Migut.D01333 Erythranthe guttata HOM05D003165 ORTHO05D003589 3.9e-19 97.4 60 86.7
Migut.G00430 Erythranthe guttata HOM05D003165 ORTHO05D003589 3.9e-19 97.4 60 86.7
SalBow1G5840 Salvia bowleyana HOM05D003165 ORTHO05D003589 3.9e-19 97.4 60 86.7
CSS0048851 Camellia sinensis var. sinensis HOM05D003165 ORTHO05D003589 5.0e-19 97.1 62 87.1
Hma1.2p1_4210F.1_g338473 Hydrangea macrophylla HOM05D003165 ORTHO05D003589 5.0e-19 97.1 62 88.7
SalBow3G1661 Salvia bowleyana HOM05D003165 ORTHO05D003589 5.0e-19 97.1 60 86.7
SalBow3G1899 Salvia bowleyana HOM05D003165 ORTHO05D003589 5.0e-19 97.1 60 86.7
HanXRQChr01g0011841 Helianthus annuus HOM05D003165 ORTHO05D003589 6.6e-19 96.7 60 86.7
HanXRQChr17g0546761 Helianthus annuus HOM05D003165 ORTHO05D003589 1.5e-18 95.5 59 86.4
RcHm_v2.0_CPg0502501 Rosa chinensis HOM05D003165 ORTHO05D003589 1.5e-18 95.5 62 87.1
Gohir.1Z049480 Gossypium hirsutum HOM05D003165 ORTHO05D003589 2.5e-18 94.7 62 83.9
Gohir.A04G039135 Gossypium hirsutum HOM05D003165 ORTHO05D003589 2.5e-18 94.7 62 83.9
Lalb_Chr07g0192871 Lupinus albus HOM05D003165 ORTHO05D003589 2.5e-18 94.7 62 85.5
Gohir.A01G139684 Gossypium hirsutum HOM05D003165 ORTHO05D003589 3.3e-18 94.4 62 82.3
Hund07985 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund08203 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund08798 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund11180 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund12720 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund12847 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund19323 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund22544 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund22777 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund26849 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund27475 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund27650 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund27674 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund27695 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund27740 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund27809 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund27837 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund27879 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund27888 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund27933 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund27948 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28041 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28062 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28127 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28256 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28320 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28326 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28533 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28601 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28648 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28774 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28899 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28908 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28967 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28986 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28990 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28995 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund28999 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29003 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29045 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29066 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29158 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29224 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29236 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29258 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29295 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29298 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29301 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29304 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29322 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29329 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29346 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29658 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund29688 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund30268 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund30351 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund30506 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund31022 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
Hund31232 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.3e-18 94.4 55 90.9
DCAR_032467 Daucus carota HOM05D003165 ORTHO05D003589 4.3e-18 94.0 62 85.5
CAN.G210.10 Capsicum annuum HOM05D003165 ORTHO05D003589 9.5e-18 92.8 62 83.9
CAN.G612.7 Capsicum annuum HOM05D003165 ORTHO05D003589 9.5e-18 92.8 62 83.9
CAN.G741.20 Capsicum annuum HOM05D003165 ORTHO05D003589 9.5e-18 92.8 62 83.9
Gorai.009G320900 Gossypium raimondii HOM05D003165 ORTHO05D003589 1.6e-17 92.0 62 80.6
Sed0022707 Sechium edule HOM05D003165 ORTHO05D003589 2.1e-17 91.7 62 83.9
arahy.Tifrunner.gnm1.ann1.IBW0TW Arachis hypogaea HOM05D003165 ORTHO05D003589 3.6e-17 90.9 58 86.2
CAN.G612.9 Capsicum annuum HOM05D003165 ORTHO05D003589 3.6e-17 90.9 62 82.3
Potri.013G138100 Populus trichocarpa HOM05D003165 ORTHO05D003589 6.2e-17 90.1 62 82.3
arahy.Tifrunner.gnm1.ann1.CR1XRQ Arachis hypogaea HOM05D003165 ORTHO05D009557 1.1e-16 89.4 57 86.0
CAN.G43.5 Capsicum annuum HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 79.0
CARHR281860 Cardamine hirsuta HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 80.6
BolC2t10577H Brassica oleracea HOM05D003165 ORTHO05D003589 1.8e-16 88.6 62 79.0
BolC7t41029H Brassica oleracea HOM05D003165 ORTHO05D003589 1.8e-16 88.6 62 79.0
BolSC37t60775H Brassica oleracea HOM05D003165 ORTHO05D003589 1.8e-16 88.6 62 79.0
BolSC45t60883H Brassica oleracea HOM05D003165 ORTHO05D003589 1.8e-16 88.6 62 79.0
BolSC45t60931H Brassica oleracea HOM05D003165 ORTHO05D003589 1.8e-16 88.6 62 79.0
BolSC46t60980H Brassica oleracea HOM05D003165 ORTHO05D003589 1.8e-16 88.6 62 79.0
BolSC49t61204H Brassica oleracea HOM05D003165 ORTHO05D003589 1.8e-16 88.6 62 79.0
BraA07t28392Z Brassica rapa HOM05D003165 ORTHO05D003589 1.8e-16 88.6 62 79.0
BraSC151t45688Z Brassica rapa HOM05D003165 ORTHO05D003589 1.8e-16 88.6 62 79.0
BraSC59t46517Z Brassica rapa HOM05D003165 ORTHO05D003589 1.8e-16 88.6 62 79.0
Nn020s41494 Nelumbo nucifera HOM05D003165 ORTHO05D003589 2.3e-16 88.2 62 80.6
Hund01831 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-16 88.2 54 87.0
ATCG00070 Arabidopsis thaliana HOM05D003165 ORTHO05D003589 5.2e-16 87.0 62 77.4
CAN.G68.4 Capsicum annuum HOM05D003165 ORTHO05D003589 5.2e-16 87.0 62 75.8
PSO548G0059 Papaver somniferum HOM05D003165 ORTHO05D003589 5.2e-16 87.0 62 80.6
Solyc00g500049.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 5.2e-16 87.0 59 81.4
Solyc00g500132.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 5.2e-16 87.0 59 81.4
Solyc00g500202.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 5.2e-16 87.0 59 81.4
Solyc00g500331.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 5.2e-16 87.0 59 81.4
GSVIVG01037458001 Vitis vinifera HOM05D003165 ORTHO05D003589 6.8e-16 86.7 62 77.4
Hund27862 Selenicereus undatus HOM05D003165 ORTHO05D003589 8.9e-16 86.3 49 89.8
BolSC29t60523H Brassica oleracea HOM05D003165 ORTHO05D003589 1.2e-15 85.9 60 78.3
Os11g0592350 Oryza sativa ssp. japonica HOM05D003165 ORTHO05D003589 2.6e-15 84.7 62 75.8
Solyc00g500293.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 2.6e-15 84.7 57 82.5
Gohir.D03G053280 Gossypium hirsutum HOM05D003165 ORTHO05D003589 7.5e-15 83.2 57 80.7
LjContig00318g0024148 Lotus japonicus HOM05D003165 ORTHO05D003589 1.1e-13 79.3 58 75.9
Zm00001eb435330 Zea mays HOM05D003165 ORTHO05D003589 1.1e-13 79.3 62 74.2
Zm00001eb435800 Zea mays HOM05D003165 ORTHO05D003589 1.1e-13 79.3 62 74.2
Zm00001eb436880 Zea mays HOM05D003165 ORTHO05D003589 1.1e-13 79.3 62 74.2
Zm00001eb437300 Zea mays HOM05D003165 ORTHO05D003589 1.1e-13 79.3 62 74.2
Zm00001eb437760 Zea mays HOM05D003165 ORTHO05D003589 1.1e-13 79.3 62 74.2
Zm00001eb438270 Zea mays HOM05D003165 ORTHO05D003589 1.1e-13 79.3 62 74.2
Lsat_1_v5_gn_5_110781 Lactuca sativa HOM05D000743 ORTHO05D003589 1.4e-13 79.0 53 81.1
Zm00001eb435610 Zea mays HOM05D003165 ORTHO05D003589 3.2e-13 77.8 62 72.6
CAN.G485.2 Capsicum annuum HOM05D003165 ORTHO05D003589 1.0e-11 72.8 60 71.7
Gohir.1Z050692 Gossypium hirsutum HOM05D003165 ORTHO05D003589 1.3e-11 72.4 40 90.0
Peaxi162Scf00219g00034 Petunia axillaris HOM05D003165 ORTHO05D003589 6.6e-11 70.1 57 73.7
CAN.G364.3 Capsicum annuum HOM05D003165 ORTHO05D003589 1.1e-10 69.3 62 67.7
Hund29292 Selenicereus undatus HOM05D003165 ORTHO05D003589 1.9e-10 68.6 37 91.9
Gohir.A08G117233 Gossypium hirsutum HOM05D003165 ORTHO05D003589 3.1e-08 61.2 55 61.8
arahy.Tifrunner.gnm1.ann1.5MH7M9 Arachis hypogaea HOM05D003165 ORTHO05D003589 4.0e-08 60.8 45 75.6
CAN.G1872.7 Capsicum annuum HOM05D003165 ORTHO05D003589 7.6e-07 56.6 42 69.0
Glyma.12G095600 Glycine max HOM05D003165 ORTHO05D003589 7.6e-07 56.6 60 58.3
Hund23972 Selenicereus undatus HOM05D003165 ORTHO05D003589 1.7e-06 55.5 37 73.0
MD03G1146700 Malus domestica HOM05D003165 ORTHO05D003589 6.4e-06 53.5 36 83.3


User provided reference genes

Program Settings