Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR111G0077 Punica granatum HOM05D008505 ORTHO05D010735 1.6e-17 91.7 45 100.0
ATCG00630 Arabidopsis thaliana HOM05D008505 ORTHO05D010735 3.5e-17 90.5 45 97.8
CAN.G2018.8 Capsicum annuum HOM05D008505 ORTHO05D010735 4.6e-17 90.1 45 97.8
CAN.G3365.2 Capsicum annuum HOM05D008505 ORTHO05D010735 4.6e-17 90.1 45 97.8
CAN.G35999.1 Capsicum annuum HOM05D008505 ORTHO05D010735 4.6e-17 90.1 45 97.8
CAN.G89.2 Capsicum annuum HOM05D008505 ORTHO05D010735 4.6e-17 90.1 45 97.8
CARHR282140 Cardamine hirsuta HOM05D008505 ORTHO05D010735 4.6e-17 90.1 44 97.7
Migut.D01431 Erythranthe guttata HOM05D008505 ORTHO05D010735 4.6e-17 90.1 45 97.8
Solyc09g064400.2 Solanum lycopersicum HOM05D008505 ORTHO05D010735 6.0e-17 89.7 44 97.7
CAN.G452.6 Capsicum annuum HOM05D008505 ORTHO05D010735 2.3e-16 87.8 45 95.6
PSO548G0021 Papaver somniferum HOM05D008505 ORTHO05D010735 2.3e-16 87.8 45 93.3
Solyc01g067760.1 Solanum lycopersicum HOM05D008505 ORTHO05D010735 3.0e-16 87.4 43 97.7
CAN.G1595.9 Capsicum annuum HOM05D008505 ORTHO05D010735 5.1e-16 86.7 45 93.3
Glyma.12G232400 Glycine max HOM05D008505 ORTHO05D010735 5.1e-16 86.7 45 93.3
Glyma.15G126100 Glycine max HOM05D008505 ORTHO05D010735 5.1e-16 86.7 45 93.3
Phvul.009G188366 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 5.1e-16 86.7 45 93.3
Phvul.002G090522 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 6.7e-16 86.3 44 93.2
LjContig00318g0023250 Lotus japonicus HOM05D008505 ORTHO05D010735 8.7e-16 85.9 45 93.3
C04p42980 Brassica napus HOM05D008505 ORTHO05D010735 1.9e-15 84.7 45 91.1
BolC4t25868H Brassica oleracea HOM05D008505 ORTHO05D010735 1.9e-15 84.7 45 91.1
CAN.G1739.9 Capsicum annuum HOM05D008505 ORTHO05D010735 1.9e-15 84.7 45 91.1
DCAR_032504 Daucus carota HOM05D008505 ORTHO05D010735 1.9e-15 84.7 42 95.2
Gorai.009G128900 Gossypium raimondii HOM05D008505 ORTHO05D010735 1.9e-15 84.7 43 90.7
A06p23140 Brassica napus HOM05D008505 ORTHO05D010735 7.4e-15 82.8 42 95.2
C02p43560 Brassica napus HOM05D008505 ORTHO05D010735 7.4e-15 82.8 42 95.2
C06p22980 Brassica napus HOM05D008505 ORTHO05D010735 7.4e-15 82.8 42 95.2
BolC9t53162H Brassica oleracea HOM05D008505 ORTHO05D010735 7.4e-15 82.8 42 95.2
BolSC29t60474H Brassica oleracea HOM05D008505 ORTHO05D010735 7.4e-15 82.8 42 95.2
BolSC29t60595H Brassica oleracea HOM05D008505 ORTHO05D010735 7.4e-15 82.8 42 95.2
BolSC35t60655H Brassica oleracea HOM05D008505 ORTHO05D010735 7.4e-15 82.8 42 95.2
BolSC47t61089H Brassica oleracea HOM05D008505 ORTHO05D010735 7.4e-15 82.8 42 95.2
BraA06t25417Z Brassica rapa HOM05D008505 ORTHO05D010735 7.4e-15 82.8 42 95.2
BraSC138t45568Z Brassica rapa HOM05D008505 ORTHO05D010735 7.4e-15 82.8 42 95.2
BraSC25t45858Z Brassica rapa HOM05D008505 ORTHO05D010735 7.4e-15 82.8 42 95.2
BraSC58t46429Z Brassica rapa HOM05D008505 ORTHO05D010735 7.4e-15 82.8 42 95.2
arahy.Tifrunner.gnm1.ann1.DJ5Q02 Arachis hypogaea HOM05D008505 ORTHO05D010735 9.6e-15 82.4 42 92.9
Gohir.A12G229532 Gossypium hirsutum HOM05D008505 ORTHO05D010735 1.6e-14 81.6 42 92.9
Nitab4.5_0011882g0050 Nicotiana tabacum HOM05D008505 ORTHO05D010735 2.8e-14 80.9 42 90.5
BolC2t08913H Brassica oleracea HOM05D008505 ORTHO05D010735 3.7e-14 80.5 43 90.7
Gorai.005G108800 Gossypium raimondii HOM05D008505 ORTHO05D010735 3.7e-14 80.5 43 86.0
Gohir.D12G108100 Gossypium hirsutum HOM05D008505 ORTHO05D010735 1.4e-13 78.6 42 90.5
BraSC103t45457Z Brassica rapa HOM05D008505 ORTHO05D010735 6.9e-13 76.3 41 90.2
BraSC103t45474Z Brassica rapa HOM05D008505 ORTHO05D010735 6.9e-13 76.3 42 90.5
CiPaw.11G114400 Carya illinoinensis HOM05D008505 ORTHO05D010735 1.0e-11 72.4 42 83.3
Gorai.007G307300 Gossypium raimondii HOM05D008505 ORTHO05D010735 1.7e-11 71.6 42 83.3
Potri.003G067501 Populus trichocarpa HOM05D008505 ORTHO05D010735 2.2e-11 71.2 42 78.6
Gohir.D06G113625 Gossypium hirsutum HOM05D008505 ORTHO05D010735 5.0e-11 70.1 41 82.9
Gorai.010G129600 Gossypium raimondii HOM05D007549 ORTHO05D009532 8.4e-11 69.3 38 84.2
Medtr8g045210 Medicago truncatula HOM05D007549 ORTHO05D009532 2.5e-10 67.8 35 91.4
BolSC35t60742H Brassica oleracea HOM05D008505 ORTHO05D010735 1.8e-08 61.6 31 93.5
ClCG00G001570 Citrullus lanatus HOM05D000540 ORTHO05D008899 1.1e-07 58.9 35 77.1
Hund19833 Selenicereus undatus HOM05D008505 ORTHO05D010735 1.1e-07 58.9 37 78.4
Nn3g18711 Nelumbo nucifera HOM05D008505 ORTHO05D010735 7.4e-07 56.2 28 92.9
arahy.Tifrunner.gnm1.ann1.94BM57 Arachis hypogaea HOM05D011000 ORTHO05D083736 8.2e-06 52.8 30 86.7


User provided reference genes

Program Settings