Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR111G0065 Punica granatum HOM05D000533 ORTHO05D010350 7.9e-40 166.8 91 100.0
Potri.012G027700 Populus trichocarpa HOM05D000533 ORTHO05D010350 9.0e-36 153.3 91 90.1
Gohir.D11G334200 Gossypium hirsutum HOM05D000533 ORTHO05D010350 9.9e-35 149.8 91 87.9
Sed0000963 Sechium edule HOM05D000533 ORTHO05D010350 1.3e-34 149.4 91 86.8
RcHm_v2.0_Chr3g0470821 Rosa chinensis HOM05D000533 ORTHO05D010350 1.1e-33 146.4 91 84.6
Gohir.A01G140394 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.4e-33 146.0 89 87.6
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-33 145.6 91 86.8
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-33 145.6 91 86.8
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-33 145.6 91 86.8
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-33 145.6 91 86.8
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-33 145.6 91 86.8
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-33 145.6 91 86.8
Nn1g08630 Nelumbo nucifera HOM05D000533 ORTHO05D010350 2.4e-33 145.2 91 89.0
LjContig00318g0021062 Lotus japonicus HOM05D000533 ORTHO05D010350 3.2e-33 144.8 91 85.7
LjContig00319g0004235 Lotus japonicus HOM05D000533 ORTHO05D010350 3.2e-33 144.8 91 85.7
Oeu058352.1 Olea europaea HOM05D000533 ORTHO05D010350 3.2e-33 144.8 91 85.7
Gohir.A04G053052 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.1e-32 142.1 88 86.4
BolC2t10602H Brassica oleracea HOM05D000533 ORTHO05D010350 1.3e-31 139.4 91 83.5
BolSC29t60511H Brassica oleracea HOM05D000533 ORTHO05D010350 1.3e-31 139.4 91 83.5
BolSC35t60709H Brassica oleracea HOM05D000533 ORTHO05D010350 1.3e-31 139.4 91 83.5
BolSC37t60798H Brassica oleracea HOM05D000533 ORTHO05D010350 1.3e-31 139.4 91 83.5
BraSC138t45530Z Brassica rapa HOM05D000533 ORTHO05D010350 1.3e-31 139.4 91 83.5
BraSC143t45655Z Brassica rapa HOM05D000533 ORTHO05D010350 1.3e-31 139.4 91 83.5
BraSC25t45915Z Brassica rapa HOM05D000533 ORTHO05D010350 1.3e-31 139.4 91 83.5
BraSC59t46555Z Brassica rapa HOM05D000533 ORTHO05D010350 1.3e-31 139.4 91 83.5
CAN.G1470.7 Capsicum annuum HOM05D000533 ORTHO05D010350 1.3e-31 139.4 91 83.5
CAN.G965.2 Capsicum annuum HOM05D000533 ORTHO05D010350 1.3e-31 139.4 91 83.5
Lalb_Chr07g0191831 Lupinus albus HOM05D000533 ORTHO05D010350 3.9e-31 137.9 92 82.6
BolSC35t60687H Brassica oleracea HOM05D000533 ORTHO05D010350 5.1e-31 137.5 91 82.4
CARHR282480 Cardamine hirsuta HOM05D000533 ORTHO05D010350 5.1e-31 137.5 91 82.4
Eucgr.C01838 Eucalyptus grandis HOM05D000533 ORTHO05D010350 8.7e-31 136.7 84 88.1
PGSC0003DMG400029905 Solanum tuberosum HOM05D000533 ORTHO05D010350 8.7e-31 136.7 91 82.4
Lalb_Chr15g0080711 Lupinus albus HOM05D000533 ORTHO05D010350 1.5e-30 136.0 92 81.5
BolC7t43859H Brassica oleracea HOM05D000533 ORTHO05D010350 1.9e-30 135.6 91 81.3
DCAR_032543 Daucus carota HOM05D000533 ORTHO05D010350 2.5e-30 135.2 88 77.3
Lalb_Chr20g0108591 Lupinus albus HOM05D000533 ORTHO05D010350 3.3e-30 134.8 92 81.5
ATCG01120 Arabidopsis thaliana HOM05D000533 ORTHO05D010350 1.6e-29 132.5 91 80.2
Gohir.1Z050566 Gossypium hirsutum HOM05D000533 ORTHO05D010350 8.2e-29 130.2 79 86.1
Gohir.1Z049594 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.4e-28 128.6 79 84.8
Gohir.A13G086380 Gossypium hirsutum HOM05D000533 ORTHO05D010350 4.0e-28 127.9 79 84.8
Gorai.013G128500 Gossypium raimondii HOM05D000533 ORTHO05D010350 4.0e-28 127.9 79 86.1
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.2e-27 126.3 90 73.3
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.2e-27 126.3 90 73.3
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.2e-27 126.3 90 73.3
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.2e-27 126.3 90 73.3
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.2e-27 126.3 90 73.3
Medtr4g006090 Medicago truncatula HOM05D000533 ORTHO05D010350 3.4e-27 124.8 92 76.1
Lalb_Chr03g0030911 Lupinus albus HOM05D000533 ORTHO05D010350 4.5e-27 124.4 82 82.9
MD09G1289300 Malus domestica HOM05D000533 ORTHO05D010350 4.5e-27 124.4 85 76.5
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.8e-27 124.0 88 73.9
Gohir.D06G106350 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.0e-26 123.2 85 76.5
Gorai.006G055100 Gossypium raimondii HOM05D000533 ORTHO05D010350 1.0e-26 123.2 86 76.7
MD12G1237700 Malus domestica HOM05D000533 ORTHO05D010350 1.7e-26 122.5 78 79.5
Medtr6g042190 Medicago truncatula HOM05D000533 ORTHO05D010350 1.7e-26 122.5 92 75.0
Gohir.D13G114450 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.9e-25 119.0 79 81.0
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 7.1e-25 117.1 72 88.9
Gohir.D11G237260 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.1e-24 115.5 77 77.9
Peaxi162Scf00030g02115 Petunia axillaris HOM05D000533 ORTHO05D010350 2.7e-24 115.2 139 54.7
SGA_v2.0_scaffold150G36658 Striga asiatica HOM05D000533 ORTHO05D010350 4.6e-24 114.4 83 69.9
Medtr0002s0210 Medicago truncatula HOM05D000533 ORTHO05D010350 1.8e-23 112.5 75 74.7
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 3.0e-23 111.7 81 74.1
BolSC49t61148H Brassica oleracea HOM05D000533 ORTHO05D010350 3.9e-23 111.3 75 80.0
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 2.5e-22 108.6 73 76.7
Gorai.011G221100 Gossypium raimondii HOM05D000533 ORTHO05D010350 4.3e-22 107.8 71 77.5
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 4.8e-21 104.4 64 82.8
BolC9t56911H Brassica oleracea HOM05D000533 ORTHO05D010350 1.4e-20 102.8 70 80.0
MD08G1073600 Malus domestica HOM05D000533 ORTHO05D010350 1.4e-20 102.8 70 74.3
HanXRQChr17g0560431 Helianthus annuus HOM05D000533 ORTHO05D010350 3.1e-20 101.7 67 85.1
BolSC29t60551H Brassica oleracea HOM05D000533 ORTHO05D010350 5.3e-20 100.9 72 79.2
BolSC45t60904H Brassica oleracea HOM05D000533 ORTHO05D010350 1.5e-19 99.4 68 80.9
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 2.0e-19 99.0 64 82.8
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 2.2e-18 95.5 61 85.2
C09p40120 Brassica napus HOM05D000890 ORTHO05D000697 6.5e-18 94.0 58 84.5
BolC5t34052H Brassica oleracea HOM05D000533 ORTHO05D010350 1.4e-17 92.8 56 87.5
BolSC44t60827H Brassica oleracea HOM05D000533 ORTHO05D010350 7.2e-17 90.5 73 69.9
Medtr1g041540 Medicago truncatula HOM05D000533 ORTHO05D001069 7.9e-16 87.0 68 70.6
MD12G1214000 Malus domestica HOM05D000533 ORTHO05D010350 2.2e-13 79.0 53 71.7
Hund03919 Selenicereus undatus HOM05D000533 ORTHO05D010350 1.1e-12 76.6 68 61.8
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 2.4e-12 75.5 61 72.1
HanXRQChr00c0690g0576771 Helianthus annuus HOM05D000533 ORTHO05D010350 4.1e-12 74.7 59 72.9
Phvul.001G058350 Phaseolus vulgaris HOM05D000533 ORTHO05D010350 4.1e-12 74.7 54 72.2
MD12G1021800 Malus domestica HOM05D000533 ORTHO05D010350 7.7e-11 70.5 45 80.0
AagrBONN_evm.TU.Sc2ySwM_368.3374 Anthoceros agrestis HOM05D003936 ORTHO05D004747 4.7e-08 61.2 71 43.7
CBR_g28520 Chara braunii HOM05D003936 ORTHO05D004747 4.7e-08 61.2 74 43.2
MCO09G555 Micromonas commoda HOM05D000533 ORTHO05D010350 1.0e-07 60.1 68 42.6
Mapoly0065s0028 Marchantia polymorpha HOM05D003936 ORTHO05D004747 1.4e-07 59.7 68 42.6


User provided reference genes

Program Settings