Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR111G0032 Punica granatum HOM05D007371 ORTHO05D009319 1.2e-89 333.2 177 100.0
Nn064s42209 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.2e-84 316.6 177 93.2
Gohir.1Z049431 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.7e-83 312.8 177 92.1
Gohir.1Z049679 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.7e-83 312.8 177 92.1
Gohir.A02G134600 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.7e-83 312.8 177 92.1
Nn3g20215 Nelumbo nucifera HOM05D007371 ORTHO05D009319 3.8e-83 311.6 177 92.1
DCAR_032539 Daucus carota HOM05D007371 ORTHO05D009319 1.5e-82 309.7 177 91.5
Gohir.A09G046246 Gossypium hirsutum HOM05D007371 ORTHO05D009319 4.2e-82 308.1 177 91.0
RcHm_v2.0_Chr5g0017201 Rosa chinensis HOM05D007371 ORTHO05D009319 3.6e-81 305.1 177 91.0
RcHm_v2.0_CPg0502761 Rosa chinensis HOM05D007371 ORTHO05D009319 3.6e-81 305.1 177 91.0
Migut.D01251 Erythranthe guttata HOM05D007371 ORTHO05D009319 5.2e-80 301.2 177 89.3
PSO548G0046 Papaver somniferum HOM05D007371 ORTHO05D009319 1.2e-79 300.1 177 88.7
HanXRQChr00c0289g0573141 Helianthus annuus HOM05D007371 ORTHO05D009319 5.7e-79 297.7 177 88.7
HanXRQChr02g0059721 Helianthus annuus HOM05D007371 ORTHO05D009319 5.7e-79 297.7 177 88.7
HanXRQChr09g0258501 Helianthus annuus HOM05D007371 ORTHO05D009319 5.7e-79 297.7 177 88.7
HanXRQChr15g0465431 Helianthus annuus HOM05D007371 ORTHO05D009319 5.7e-79 297.7 177 88.7
HanXRQChr15g0465461 Helianthus annuus HOM05D007371 ORTHO05D009319 5.7e-79 297.7 177 88.7
HanXRQChr17g0569751 Helianthus annuus HOM05D007371 ORTHO05D009319 5.7e-79 297.7 177 88.7
HanXRQCPg0580341 Helianthus annuus HOM05D007371 ORTHO05D009319 5.7e-79 297.7 177 88.7
RcHm_v2.0_Chr5g0043021 Rosa chinensis HOM05D007371 ORTHO05D009319 5.7e-79 297.7 177 89.3
CAN.G1526.6 Capsicum annuum HOM05D007371 ORTHO05D009319 1.7e-78 296.2 177 88.1
CAN.G278.2 Capsicum annuum HOM05D007371 ORTHO05D009319 1.7e-78 296.2 177 88.1
CAN.G939.5 Capsicum annuum HOM05D007371 ORTHO05D009319 1.7e-78 296.2 177 88.1
SalBow1G7973 Salvia bowleyana HOM05D007371 ORTHO05D009319 1.7e-78 296.2 177 87.0
TAR625G0296 Trochodendron aralioides HOM05D007371 ORTHO05D009319 6.3e-78 294.3 177 87.6
Lj2P1238T112 Lonicera japonica HOM05D007371 ORTHO05D009319 1.4e-77 293.1 177 87.6
Lju5009P0T52 Lonicera japonica HOM05D007371 ORTHO05D009319 1.4e-77 293.1 177 87.6
ATCG01080 Arabidopsis thaliana HOM05D007371 ORTHO05D009319 2.4e-77 292.4 177 87.0
C09p24650 Brassica napus HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 87.0
C09p40180 Brassica napus HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 87.0
BolC2t10597H Brassica oleracea HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 87.0
BolSC29t60507H Brassica oleracea HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 87.0
BolSC29t60622H Brassica oleracea HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 87.0
BolSC37t60794H Brassica oleracea HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 87.0
BolSC47t61064H Brassica oleracea HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 87.0
BraA10t43431Z Brassica rapa HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 87.0
BraSC103t45430Z Brassica rapa HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 87.0
BraSC179t45773Z Brassica rapa HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 87.0
BraSC59t46552Z Brassica rapa HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 87.0
CARHR282450 Cardamine hirsuta HOM05D007371 ORTHO05D009319 3.2e-77 292.0 177 87.6
AL9U11956 Arabidopsis lyrata HOM05D007371 ORTHO05D009319 3.5e-76 288.5 177 86.4
Lj9P89T22 Lonicera japonica HOM05D007371 ORTHO05D009319 3.5e-76 288.5 177 85.9
Medtr4g006110 Medicago truncatula HOM05D007371 ORTHO05D009319 3.5e-76 288.5 176 85.8
Lalb_Chr07g0191781 Lupinus albus HOM05D007371 ORTHO05D009319 5.9e-76 287.7 177 85.3
Medtr7g021710 Medicago truncatula HOM05D007371 ORTHO05D009319 1.3e-75 286.6 176 85.2
Medtr6g042220 Medicago truncatula HOM05D007371 ORTHO05D009319 2.3e-75 285.8 177 85.3
CAN.G965.5 Capsicum annuum HOM05D007371 ORTHO05D009319 5.0e-75 284.6 177 84.7
Solyc03g013600.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 2.8e-73 278.9 177 84.2
BolC9t56922H Brassica oleracea HOM05D007371 ORTHO05D009319 4.7e-73 278.1 177 83.1
Gohir.D04G175100 Gossypium hirsutum HOM05D007371 ORTHO05D009319 4.7e-73 278.1 153 92.2
Peaxi162Scf00338g00628 Petunia axillaris HOM05D007371 ORTHO05D009319 4.7e-73 278.1 177 84.7
Nn1g08633 Nelumbo nucifera HOM05D007371 ORTHO05D009319 2.6e-71 272.3 162 87.0
Medtr5g063410 Medicago truncatula HOM05D007371 ORTHO05D009319 2.9e-70 268.9 176 82.4
HanXRQChr17g0569721 Helianthus annuus HOM05D007371 ORTHO05D009319 7.0e-69 264.2 162 86.4
Solyc02g011770.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 1.0e-67 260.4 177 78.5
Gohir.D12G089301 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.3e-64 249.2 152 86.2
Gohir.D06G133700 Gossypium hirsutum HOM05D007371 ORTHO05D009319 8.9e-56 220.7 161 76.4
CAN.G256.22 Capsicum annuum HOM05D007371 ORTHO05D009319 3.4e-55 218.8 141 80.9
Solyc07g026910.3 Solanum lycopersicum HOM05D007371 ORTHO05D009319 4.4e-55 218.4 137 83.2
Glyma.19G081000 Glycine max HOM05D007371 ORTHO05D009319 1.0e-51 207.2 150 76.7
BraSC143t45659Z Brassica rapa HOM05D007371 ORTHO05D009319 6.2e-49 198.0 124 83.9
Potri.013G075100 Populus trichocarpa HOM05D007371 ORTHO05D009319 3.8e-46 188.7 118 79.7
BolSC45t60908H Brassica oleracea HOM05D007371 ORTHO05D009319 5.1e-43 178.3 108 86.1
Nn031s41614 Nelumbo nucifera HOM05D007371 ORTHO05D009319 5.1e-43 178.3 99 89.9
Medtr0002s0160 Medicago truncatula HOM05D000533 ORTHO05D006151 8.7e-43 177.6 117 77.8
BolSC29t60547H Brassica oleracea HOM05D007371 ORTHO05D009319 1.9e-42 176.4 107 86.0
BolSC35t60691H Brassica oleracea HOM05D007371 ORTHO05D009319 1.9e-42 176.4 107 86.0
BolSC46t60957H Brassica oleracea HOM05D007371 ORTHO05D009319 1.9e-42 176.4 107 86.0
BolSC56t61236H Brassica oleracea HOM05D007371 ORTHO05D009319 1.9e-42 176.4 107 86.0
CAN.G262.7 Capsicum annuum HOM05D007371 ORTHO05D009319 1.9e-42 176.4 119 78.2
Thecc.08G131100 Theobroma cacao HOM05D007371 ORTHO05D009319 9.6e-42 174.1 99 87.9
HanXRQChr00c0336g0573671 Helianthus annuus HOM05D007371 ORTHO05D009319 2.1e-41 172.9 99 86.9
Gohir.A03G146201 Gossypium hirsutum HOM05D007371 ORTHO05D009319 6.2e-41 171.4 163 59.5
BolSC35t60705H Brassica oleracea HOM05D007371 ORTHO05D009319 2.6e-39 166.0 99 84.8
Gorai.013G109900 Gossypium raimondii HOM05D007371 ORTHO05D009319 6.4e-38 161.4 98 84.7
BraSC25t45911Z Brassica rapa HOM05D007371 ORTHO05D009319 5.4e-37 158.3 93 86.0
BolSC49t61144H Brassica oleracea HOM05D007371 ORTHO05D009319 9.3e-37 157.5 99 83.8
HanXRQChr01g0000251 Helianthus annuus HOM05D007371 ORTHO05D009319 1.2e-36 157.1 153 64.7
Nitab4.5_0007979g0070 Nicotiana tabacum HOM05D007371 ORTHO05D009319 2.7e-36 156.0 177 57.6
C02p24280 Brassica napus HOM05D007371 ORTHO05D009319 1.7e-35 153.3 128 64.8
C09p40330 Brassica napus HOM05D007371 ORTHO05D009319 2.3e-35 152.9 100 82.0
Gorai.005G189900 Gossypium raimondii HOM05D007371 ORTHO05D009319 5.1e-35 151.8 94 79.8
BraSC138t45534Z Brassica rapa HOM05D007371 ORTHO05D009319 1.5e-34 150.2 109 76.1
Hma1.2p1_0656F.1_g196806 Hydrangea macrophylla HOM05D007371 ORTHO05D009319 1.6e-33 146.7 84 92.9
Gohir.D02G169550 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.4e-32 142.9 96 75.0
BolC2t10612H Brassica oleracea HOM05D007371 ORTHO05D009319 1.2e-31 140.6 84 89.3
HanXRQChr05g0152451 Helianthus annuus HOM05D007371 ORTHO05D009319 1.7e-30 136.7 74 86.5
HanXRQChr08g0211951 Helianthus annuus HOM05D007371 ORTHO05D009319 1.7e-30 136.7 74 86.5
Gohir.D07G194033 Gossypium hirsutum HOM05D007371 ORTHO05D009319 9.3e-29 131.0 76 88.2
Solyc11g021217.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 7.9e-28 127.9 85 83.5
arahy.Tifrunner.gnm1.ann1.5E4H9C Arachis hypogaea HOM05D007371 ORTHO05D009319 3.9e-27 125.6 84 79.8
BraSC58t46462Z Brassica rapa HOM05D007371 ORTHO05D009319 6.7e-27 124.8 75 80.0
HanXRQChr00c0703g0576941 Helianthus annuus HOM05D007371 ORTHO05D009319 6.7e-27 124.8 75 90.7
SMO086G0016 Selaginella moellendorffii HOM05D007371 ORTHO05D009319 1.8e-24 116.7 176 45.5
arahy.Tifrunner.gnm1.ann1.UDKX9E Arachis hypogaea HOM05D000890 ORTHO05D000697 5.8e-23 111.7 67 77.6
RcHm_v2.0_Chr4g0438011 Rosa chinensis HOM05D007371 ORTHO05D009319 1.7e-22 110.2 60 93.3
arahy.Tifrunner.gnm1.ann1.4VL02K Arachis hypogaea HOM05D001200 ORTHO05D009778 2.2e-22 109.8 74 79.7
arahy.Tifrunner.gnm1.ann1.9I8ZI2 Arachis hypogaea HOM05D001200 ORTHO05D009778 2.2e-22 109.8 74 79.7
arahy.Tifrunner.gnm1.ann1.V71EA1 Arachis hypogaea HOM05D001200 ORTHO05D009778 2.2e-22 109.8 74 79.7
HanXRQChr02g0037971 Helianthus annuus HOM05D007371 ORTHO05D009319 8.4e-22 107.8 83 73.5
Lalb_Chr09g0335451 Lupinus albus HOM05D007371 ORTHO05D009319 3.0e-19 99.4 65 78.5
BolC7t43856H Brassica oleracea HOM05D007371 ORTHO05D009319 4.3e-18 95.5 56 83.9
Aa31LG5G21710 Aethionema arabicum HOM05D007371 ORTHO05D009319 7.4e-18 94.7 85 69.4
HanXRQChr11g0323761 Helianthus annuus HOM05D007371 ORTHO05D009319 1.4e-16 90.5 81 69.1
Mapoly0048s0040 Marchantia polymorpha HOM05D007371 ORTHO05D009319 2.2e-14 83.2 99 47.5
Lsat_1_v5_gn_6_54121 Lactuca sativa HOM05D007371 ORTHO05D009319 1.4e-13 80.5 48 87.5
HanXRQChr02g0038001 Helianthus annuus HOM05D007371 ORTHO05D009319 2.5e-13 79.7 61 72.1
Lalb_Chr11g0071331 Lupinus albus HOM05D007371 ORTHO05D009319 3.0e-11 72.8 70 60.0
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 9.7e-10 67.8 80 51.2
Haze_02268 Corylus avellana HOM05D007371 ORTHO05D009319 2.8e-09 66.2 42 78.6
Hund24330 Selenicereus undatus HOM05D007371 ORTHO05D009319 6.9e-08 61.6 60 56.7


User provided reference genes

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