Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G3329 Punica granatum HOM05D000219 ORTHO05D004649 6.8e-262 906.7 443 100.0
Atru.chr10.1102 Acer truncatum HOM05D000219 ORTHO05D004649 1.5e-168 596.7 421 67.9
Ciclev10027573m.g Citrus clementina HOM05D000219 ORTHO05D004649 4.8e-167 591.7 421 66.7
Eucgr.H04885 Eucalyptus grandis HOM05D000219 ORTHO05D004649 4.5e-165 585.1 417 68.3
TAR625G1522 Trochodendron aralioides HOM05D000219 ORTHO05D004649 2.1e-162 576.2 421 66.0
GSVIVG01022253001 Vitis vinifera HOM05D000219 ORTHO05D004649 2.1e-162 576.2 439 63.3
QL06p031679 Quercus lobata HOM05D000219 ORTHO05D004649 5.2e-161 571.6 421 65.3
THA.LOC104800903 Tarenaya hassleriana HOM05D000219 ORTHO05D004649 1.5e-160 570.1 420 65.0
Thhalv10016524m.g Eutrema salsugineum HOM05D000219 ORTHO05D004649 1.7e-159 566.6 414 65.0
Carub.0004s1368 Capsella rubella HOM05D000219 ORTHO05D004649 2.2e-159 566.2 420 63.1
TWI79G1233 Tripterygium wilfordii HOM05D000219 ORTHO05D004649 2.8e-159 565.8 420 64.0
A03p17780 Brassica napus HOM05D000219 ORTHO05D004649 3.7e-159 565.5 419 64.7
Cc07_g16490 Coffea canephora HOM05D000219 ORTHO05D004649 3.7e-159 565.5 419 64.4
Carub.0004s1289 Capsella rubella HOM05D000219 ORTHO05D004649 8.2e-159 564.3 426 63.1
AL4G26840 Arabidopsis lyrata HOM05D000219 ORTHO05D004649 1.4e-158 563.5 414 64.3
C03p20860 Brassica napus HOM05D000219 ORTHO05D004649 1.4e-158 563.5 419 64.4
Carub.0004s1193 Capsella rubella HOM05D000219 ORTHO05D004649 2.4e-158 562.8 423 62.4
Potri.002G233300 Populus trichocarpa HOM05D000219 ORTHO05D004649 4.1e-158 562.0 415 65.1
CARHR008820 Cardamine hirsuta HOM05D000219 ORTHO05D004649 3.5e-157 558.9 415 64.3
Sp4g14010 Schrenkiella parvula HOM05D000219 ORTHO05D004649 1.3e-156 557.0 419 63.2
CSS0031787 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D004649 2.9e-156 555.8 421 65.3
Duzib235G0760 Durio zibethinus HOM05D000219 ORTHO05D004649 6.5e-156 554.7 419 62.8
BcaC02g11270 Brassica carinata HOM05D000219 ORTHO05D004649 8.5e-156 554.3 420 62.6
A05p13880 Brassica napus HOM05D000219 ORTHO05D004649 1.1e-155 553.9 420 62.9
Manes.11G020000 Manihot esculenta HOM05D000219 ORTHO05D004649 1.1e-155 553.9 393 65.4
BcaB02g10403 Brassica carinata HOM05D000219 ORTHO05D004649 3.2e-155 552.4 419 62.3
AT2G32320 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 5.5e-155 551.6 419 61.6
Dinv19467 Davidia involucrata HOM05D000219 ORTHO05D004649 7.2e-155 551.2 380 68.4
BraA03t11042Z Brassica rapa HOM05D000219 ORTHO05D004649 1.2e-154 550.4 446 60.8
C04p18270 Brassica napus HOM05D000219 ORTHO05D004649 2.1e-154 549.7 424 61.8
Cfa002771 Carpinus fangiana HOM05D000219 ORTHO05D004649 2.1e-154 549.7 424 63.0
BolC3t14438H Brassica oleracea HOM05D000219 ORTHO05D004649 1.0e-153 547.4 452 60.2
CiPaw.15G021800 Carya illinoinensis HOM05D000219 ORTHO05D004649 1.4e-153 547.0 440 61.4
BraA05t20324Z Brassica rapa HOM05D000219 ORTHO05D004649 5.7e-152 541.6 449 59.0
Sed0023684 Sechium edule HOM05D000219 ORTHO05D004649 7.5e-152 541.2 419 61.6
Gorai.009G178600 Gossypium raimondii HOM05D000219 ORTHO05D004649 9.7e-152 540.8 421 61.5
FvH4_1g22971 Fragaria vesca HOM05D000219 ORTHO05D004649 2.2e-151 539.7 402 64.7
Gohir.A05G170300 Gossypium hirsutum HOM05D000219 ORTHO05D004649 2.8e-151 539.3 420 61.7
Gohir.D05G173400 Gossypium hirsutum HOM05D000219 ORTHO05D004649 2.8e-151 539.3 421 61.3
CANSAT64G2196 Cannabis sativa HOM05D000219 ORTHO05D004649 1.4e-150 537.0 423 62.9
Sabra02G0178000 Salix brachista HOM05D000219 ORTHO05D004649 1.8e-150 536.6 491 55.4
Sopen04g022970 Solanum pennellii HOM05D000219 ORTHO05D004649 1.8e-150 536.6 409 63.1
BolC4t23384H Brassica oleracea HOM05D000219 ORTHO05D004649 5.3e-150 535.0 451 58.1
COL.COLO4_16836 Corchorus olitorius HOM05D000219 ORTHO05D004649 1.2e-149 533.9 418 59.8
Aa31LG5G4650 Aethionema arabicum HOM05D000219 ORTHO05D004649 2.0e-149 533.1 394 61.9
CsaV3_6G042230 Cucumis sativus L. HOM05D000219 ORTHO05D004649 4.5e-149 531.9 417 61.4
Prupe.1G573900 Prunus persica HOM05D000219 ORTHO05D004649 5.9e-149 531.6 418 63.2
RcHm_v2.0_Chr2g0117491 Rosa chinensis HOM05D000219 ORTHO05D004649 1.7e-148 530.0 419 62.5
MD05G1030700 Malus domestica HOM05D000219 ORTHO05D004649 2.2e-148 529.6 418 62.0
Oeu027201.4 Olea europaea HOM05D000219 ORTHO05D004649 2.2e-148 529.6 422 62.1
Rhsim10G0148200 Rhododendron simsii HOM05D000219 ORTHO05D004649 5.0e-148 528.5 426 61.5
Oeu035604.1 Olea europaea HOM05D000219 ORTHO05D004649 6.5e-148 528.1 422 61.4
FvH4_2g15830 Fragaria vesca HOM05D000219 ORTHO05D004649 2.5e-147 526.2 418 61.7
ECA234G1541 Erigeron canadensis HOM05D000219 ORTHO05D004649 3.2e-147 525.8 417 61.6
Hund21266 Selenicereus undatus HOM05D000219 ORTHO05D004649 9.4e-147 524.2 416 61.5
MELO3C007464.2 Cucumis melo HOM05D000219 ORTHO05D004649 1.2e-146 523.9 418 60.0
FAN24G0946 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.2e-146 523.9 418 61.2
HanXRQChr10g0311141 Helianthus annuus HOM05D000219 ORTHO05D004649 1.2e-146 523.9 415 61.4
ClCG01G015950 Citrullus lanatus HOM05D000219 ORTHO05D004649 2.7e-146 522.7 444 58.1
FAN15G1293 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.4e-145 520.4 418 61.5
FAN20G1304 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.8e-145 520.0 418 61.0
SalBow6G5746 Salvia bowleyana HOM05D000219 ORTHO05D004649 5.2e-145 518.5 419 61.6
CAN.G1235.19 Capsicum annuum HOM05D000219 ORTHO05D004649 8.8e-145 517.7 413 61.0
Lj8A365T11 Lonicera japonica HOM05D000219 ORTHO05D004649 2.6e-144 516.2 458 55.9
FAN23G1549 Fragaria x ananassa HOM05D000219 ORTHO05D004649 3.4e-144 515.8 375 64.8
MSTRG.2524 Avicennia marina HOM05D000219 ORTHO05D004649 9.8e-144 514.2 431 59.2
Actinidia39311 Actinidia chinensis HOM05D000219 ORTHO05D004649 8.3e-143 511.1 419 60.4
DCAR_027131 Daucus carota HOM05D000219 ORTHO05D004649 2.4e-142 509.6 420 58.8
Solyc04g051600.4 Solanum lycopersicum HOM05D000219 ORTHO05D004649 2.3e-140 503.1 376 63.3
SGA_v2.0_scaffold2G01286 Striga asiatica HOM05D000219 ORTHO05D004649 1.1e-139 500.7 426 59.2
FAN26G0146 Fragaria x ananassa HOM05D000219 ORTHO05D004649 5.5e-139 498.4 375 63.2
Hma1.2p1_0975F.1_g243180 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 5.5e-139 498.4 420 57.4
Peaxi162Scf00106g01118 Petunia axillaris HOM05D000219 ORTHO05D004649 7.2e-139 498.0 420 58.1
Lj5g0005884 Lotus japonicus HOM05D000219 ORTHO05D004649 1.0e-137 494.2 421 57.0
Sc05g0007990 Simmondsia chinensis HOM05D000219 ORTHO05D004649 1.8e-137 493.4 415 58.8
Nn1g05995 Nelumbo nucifera HOM05D000219 ORTHO05D004649 2.3e-137 493.0 424 57.5
Thecc.06G220500 Theobroma cacao HOM05D000219 ORTHO05D004649 4.0e-137 492.3 345 66.7
Lalb_Chr11g0075091 Lupinus albus HOM05D000219 ORTHO05D004649 6.8e-137 491.5 421 56.5
Glyma.16G091600 Glycine max HOM05D000219 ORTHO05D004649 2.6e-136 489.6 420 57.6
VMungo0720G2488 Vigna mungo HOM05D000219 ORTHO05D004649 1.3e-135 487.3 421 57.0
Phvul.010G125700 Phaseolus vulgaris HOM05D000219 ORTHO05D004649 8.3e-135 484.6 413 57.9
Nitab4.5_0009050g0040 Nicotiana tabacum HOM05D000219 ORTHO05D004649 5.4e-134 481.9 374 63.4
Medtr7g115250 Medicago truncatula HOM05D000219 ORTHO05D004649 7.0e-134 481.5 421 55.8
Nitab4.5_0000184g0150 Nicotiana tabacum HOM05D000219 ORTHO05D004649 7.0e-134 481.5 374 63.4
arahy.Tifrunner.gnm1.ann1.V7J6Z4 Arachis hypogaea HOM05D000219 ORTHO05D004649 5.9e-133 478.4 389 58.9
vmacro12890 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 1.0e-132 477.6 487 52.0
Psat7g054840 Pisum sativum HOM05D000219 ORTHO05D004649 1.3e-132 477.2 419 55.4
Lsat_1_v5_gn_7_9060 Lactuca sativa HOM05D000219 ORTHO05D004649 1.7e-132 476.9 456 53.7
Psat0s1144g0040 Pisum sativum HOM05D000219 ORTHO05D004649 1.7e-132 476.9 424 55.0
unitig_899.g14613 Utricularia gibba HOM05D000219 ORTHO05D004649 1.7e-132 476.9 410 56.1
arahy.Tifrunner.gnm1.ann1.M2QW19 Arachis hypogaea HOM05D000219 ORTHO05D004649 2.3e-132 476.5 389 58.4
FAN27G2048 Fragaria x ananassa HOM05D000219 ORTHO05D004649 5.0e-132 475.3 418 57.4
Glyma.10G001600 Glycine max HOM05D000219 ORTHO05D004649 5.0e-132 475.3 421 55.3
Lj6g0002222 Lotus japonicus HOM05D000219 ORTHO05D004649 5.0e-132 475.3 394 57.9
TPR.G6992 Trifolium pratense HOM05D000219 ORTHO05D004649 5.0e-132 475.3 421 54.6
Ca_09426_v3 Cicer arietinum L. HOM05D000219 ORTHO05D004649 9.5e-131 471.1 422 54.5
Hma1.2p1_0252F.1_g102800 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 7.5e-128 461.5 363 61.2
AUR62016924 Chenopodium quinoa HOM05D000219 ORTHO05D004649 3.7e-127 459.1 416 56.2
AUR62010269 Chenopodium quinoa HOM05D000219 ORTHO05D004649 3.0e-124 449.5 433 53.6
vmacro14893 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 3.9e-124 449.1 390 59.7
Haze_25064 Corylus avellana HOM05D000219 ORTHO05D004649 5.0e-124 448.7 453 52.1
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 7.3e-123 444.9 351 61.5
AUR62013249 Chenopodium quinoa HOM05D000219 ORTHO05D004649 9.5e-123 444.5 433 52.7
AT2G31580 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 2.1e-122 443.4 314 64.6
COL.COLO4_17688 Corchorus olitorius HOM05D000219 ORTHO05D004649 9.6e-107 391.3 296 60.8
PGSC0003DMG400031193 Solanum tuberosum HOM05D000219 ORTHO05D004649 4.3e-99 365.9 369 50.7
Atru.chr10.1005 Acer truncatum HOM05D000219 ORTHO05D004649 1.8e-97 360.5 314 58.0
Os05g0535500 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D004649 1.5e-96 357.5 421 43.7
CAN.G1044.3 Capsicum annuum HOM05D000219 ORTHO05D004649 2.6e-96 356.7 311 56.6
MBI04_g33333_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 3.8e-95 352.8 268 64.9
EL10Ac8g20632 Beta vulgaris HOM05D000219 ORTHO05D004649 3.8e-87 326.2 316 52.2
Migut.B00934 Erythranthe guttata HOM05D000219 ORTHO05D004649 3.2e-86 323.2 245 62.9
Aqoxy2G01146 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 1.6e-82 310.8 269 58.4
PSO782G0604 Papaver somniferum HOM05D000219 ORTHO05D004649 2.1e-82 310.5 268 57.5
Aqoxy3G01228 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 2.8e-82 310.1 269 58.7
HPP92_021547 Vanilla planifolia HOM05D000219 ORTHO05D004649 1.0e-79 301.6 268 54.5
Zm00001eb294000 Zea mays HOM05D000219 ORTHO05D004649 1.2e-77 294.7 348 43.7
TAR628G0592 Trochodendron aralioides HOM05D000219 ORTHO05D004649 2.1e-77 293.9 270 55.9
ATR0322G032 Amborella trichopoda HOM05D000219 ORTHO05D004649 3.5e-77 293.1 264 56.8
CANSAT01G1436 Cannabis sativa HOM05D000219 ORTHO05D004649 1.1e-75 288.1 209 64.6
MBI05_g03455_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 1.9e-75 287.3 232 61.2
Mapoly0167s0023 Marchantia polymorpha HOM05D000219 ORTHO05D004649 2.5e-75 287.0 265 54.7
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 4.3e-75 286.2 228 61.0
AagrBONN_evm.TU.Sc2ySwM_117.2004 Anthoceros agrestis HOM05D000219 ORTHO05D004649 9.6e-75 285.0 274 51.8
CDE06G2407 Ceratophyllum demersum HOM05D000219 ORTHO05D004649 2.8e-74 283.5 235 60.0
PSO063G1486 Papaver somniferum HOM05D000219 ORTHO05D004649 4.8e-74 282.7 263 54.4
Glyma.16G117567 Glycine max HOM05D000219 ORTHO05D004649 8.2e-74 282.0 249 57.4
CBR_g11164 Chara braunii HOM05D000219 ORTHO05D004649 3.1e-73 280.0 231 59.3
PSO063G0175 Papaver somniferum HOM05D000219 ORTHO05D004649 1.5e-72 277.7 262 53.1
Pp3c1_10760 Physcomitrium patens HOM05D000219 ORTHO05D004649 3.4e-72 276.6 265 53.2
Atru.chr10.1697 Acer truncatum HOM05D000219 ORTHO05D004649 7.9e-69 265.4 187 65.8
Haze_08455 Corylus avellana HOM05D000219 ORTHO05D004649 1.5e-67 261.2 231 55.0
TAR628G0698 Trochodendron aralioides HOM05D000219 ORTHO05D004649 1.3e-66 258.1 188 69.1
Cre13.g581550 Chlamydomonas reinhardtii HOM05D000219 ORTHO05D004649 3.1e-65 253.4 266 49.2
AUR62014746 Chenopodium quinoa HOM05D000219 ORTHO05D004649 2.5e-59 233.8 263 45.2
RcHm_v2.0_Chr6g0279211 Rosa chinensis HOM05D000219 ORTHO05D004649 5.7e-59 232.6 278 43.9
SMO146G0027 Selaginella moellendorffii HOM05D000219 ORTHO05D004649 7.4e-59 232.3 259 46.3
Atru.chr10.1696 Acer truncatum HOM05D000219 ORTHO05D004649 1.8e-57 227.6 152 69.1
PRCOL_00002092 Prasinoderma coloniale HOM05D000219 ORTHO05D004649 5.9e-56 222.6 232 50.4
SHI31711 Sapria himalayana HOM05D000219 ORTHO05D004649 7.7e-56 222.2 169 58.6
HanXRQChr10g0318971 Helianthus annuus HOM05D000219 ORTHO05D004649 8.2e-50 202.2 160 60.6
Cfa023086 Carpinus fangiana HOM05D000219 ORTHO05D004649 1.3e-47 194.9 267 41.2
HPP92_021538 Vanilla planifolia HOM05D000219 ORTHO05D004649 1.6e-45 188.0 231 43.7
HPP92_021534 Vanilla planifolia HOM05D000219 ORTHO05D004649 6.1e-45 186.0 181 50.3
PGSC0003DMG402004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 1.8e-41 174.5 148 53.4
vmacro14894 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 2.4e-41 174.1 284 39.4
Glyma.16G117633 Glycine max HOM05D000219 ORTHO05D004649 4.2e-38 163.3 216 40.7
Sopen04g022950 Solanum pennellii HOM05D000219 ORTHO05D000001 2.1e-37 161.0 191 44.5
CARHR125230 Cardamine hirsuta HOM05D000219 ORTHO05D004649 3.0e-36 157.1 107 64.5
AagrBONN_evm.TU.Sc2ySwM_344.3315 Anthoceros agrestis HOM05D000219 ORTHO05D004649 3.7e-34 150.2 141 54.6
Cpa.g.c44268 Carica papaya HOM05D000219 ORTHO05D004649 1.3e-31 141.7 70 87.1
Haze_26924 Corylus avellana HOM05D000219 ORTHO05D004649 6.5e-31 139.4 171 42.1
HanXRQChr10g0318981 Helianthus annuus HOM05D000219 ORTHO05D004649 3.0e-28 130.6 125 54.4
CAN.G555.5 Capsicum annuum HOM05D000219 ORTHO05D000137 7.5e-27 125.9 90 65.6
vmacro13881 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 3.1e-25 120.6 103 52.4
SHI31709 Sapria himalayana HOM05D000219 ORTHO05D004649 4.1e-25 120.2 122 48.4
vmacro20266 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 3.5e-24 117.1 217 35.9
RcHm_v2.0_Chr2g0117501 Rosa chinensis HOM05D000219 ORTHO05D004649 7.7e-24 115.9 93 59.1
Lj7A96G45 Lonicera japonica HOM05D000219 ORTHO05D004649 3.8e-23 113.6 93 58.1
Lj7A96T47 Lonicera japonica HOM05D000219 ORTHO05D004649 2.0e-19 101.3 59 78.0
HanXRQChr10g0319001 Helianthus annuus HOM05D000219 ORTHO05D004649 4.4e-19 100.1 93 53.8
GSVIVG01006301001 Vitis vinifera HOM05D000026 ORTHO05D000127 4.4e-19 100.1 125 44.0
PGSC0003DMG400016550 Solanum tuberosum HOM05D000219 ORTHO05D004649 5.7e-19 99.8 74 62.2
HanXRQChr10g0318991 Helianthus annuus HOM05D000219 ORTHO05D021059 3.7e-18 97.1 65 67.7
AL4G27720 Arabidopsis lyrata HOM05D000219 ORTHO05D021059 1.4e-17 95.1 94 54.3
Nitab4.5_0005102g0050 Nicotiana tabacum HOM05D000219 ORTHO05D004649 3.0e-15 87.4 80 51.2
PGSC0003DMG400020961 Solanum tuberosum HOM05D000219 ORTHO05D004649 6.6e-15 86.3 49 75.5
Actinidia05378 Actinidia chinensis HOM05D000219 ORTHO05D004649 2.5e-14 84.3 51 70.6
Atru.chr10.1103 Acer truncatum HOM05D000219 ORTHO05D004649 2.3e-12 77.8 61 59.0
Atru.chr10.1695 Acer truncatum HOM05D000219 ORTHO05D021059 6.8e-12 76.3 81 48.1
CARHR125240 Cardamine hirsuta HOM05D000219 ORTHO05D004649 1.3e-10 72.0 102 41.2
PGSC0003DMG400020960 Solanum tuberosum HOM05D000219 ORTHO05D004649 1.7e-10 71.6 70 54.3
CARHR125220 Cardamine hirsuta HOM05D000219 ORTHO05D021059 1.9e-09 68.2 69 53.6
PGSC0003DMG401004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 2.0e-08 64.7 59 52.5
SHI31712 Sapria himalayana HOM05D000219 ORTHO05D366583 2.7e-08 64.3 52 53.8
C03p38700 Brassica napus HOM05D012973 ORTHO05D016770 3.5e-08 63.9 62 48.4
BcaC05g27999 Brassica carinata HOM05D012973 ORTHO05D016770 6.0e-08 63.2 66 45.5
C05p40080 Brassica napus HOM05D012973 ORTHO05D016770 6.0e-08 63.2 66 45.5
BolC3t16144H Brassica oleracea HOM05D012973 ORTHO05D016770 6.0e-08 63.2 79 43.0
BolC5t32753H Brassica oleracea HOM05D012973 ORTHO05D016770 6.0e-08 63.2 66 45.5
Gohir.A03G040550 Gossypium hirsutum HOM05D000219 ORTHO05D021059 7.8e-08 62.8 54 53.7
C09p21500 Brassica napus HOM05D000352 ORTHO05D000260 1.3e-07 62.0 47 61.7
Lj7A96T46 Lonicera japonica HOM05D000219 ORTHO05D004649 6.6e-07 59.7 42 61.9
SHI31714 Sapria himalayana HOM05D000219 ORTHO05D004649 2.5e-06 57.8 28 89.3


User provided reference genes

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