Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 4.7e-203 711.1 384 100.0
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 5.0e-120 435.3 386 60.6
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 2.7e-118 429.5 386 60.6
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 1.3e-115 420.6 384 57.0
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 2.2e-115 419.9 376 60.6
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 1.8e-114 416.8 383 58.0
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 7.0e-114 414.8 369 59.6
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 4.5e-113 412.1 385 57.1
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 5.0e-112 408.7 383 58.0
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 1.1e-111 407.5 376 56.6
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 1.9e-111 406.8 367 58.3
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 1.4e-109 400.6 383 55.1
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 5.2e-109 398.7 388 55.9
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 8.8e-109 397.9 368 60.6
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 5.7e-108 395.2 365 56.4
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 5.7e-108 395.2 388 55.2
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.8e-106 390.2 393 53.9
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 1.7e-104 383.6 388 56.2
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 5.0e-104 382.1 371 55.3
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 8.6e-104 381.3 398 53.0
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 9.5e-103 377.9 382 54.2
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 2.8e-102 376.3 387 56.6
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 6.1e-102 375.2 404 52.2
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 1.8e-101 373.6 378 54.2
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 2.3e-101 373.2 385 53.8
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 3.0e-101 372.9 364 54.1
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 1.2e-100 370.9 376 52.4
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 2.0e-100 370.2 478 47.1
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 2.6e-100 369.8 376 52.7
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 7.5e-100 368.2 385 51.9
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 7.5e-100 368.2 385 52.5
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 9.8e-100 367.9 379 52.5
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 1.3e-99 367.5 386 53.4
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 1.3e-99 367.5 359 52.9
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 2.4e-98 363.2 359 52.4
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 7.0e-98 361.7 422 49.3
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 4.6e-97 359.0 373 51.2
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 5.0e-96 355.5 375 52.0
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 1.1e-95 354.4 369 52.0
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 3.6e-94 349.4 379 51.7
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 3.4e-92 342.8 402 48.8
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 1.9e-90 337.0 380 47.4
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 2.4e-90 336.7 381 47.2
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 3.2e-90 336.3 377 48.3
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 3.5e-89 332.8 385 47.8
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 6.0e-89 332.0 384 49.0
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 6.0e-89 332.0 410 48.3
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 1.3e-88 330.9 378 46.3
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 3.0e-88 329.7 422 46.7
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 1.1e-87 327.8 375 45.6
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 1.1e-87 327.8 375 45.6
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 1.5e-87 327.4 375 46.1
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 2.5e-87 326.6 359 51.0
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 2.8e-86 323.2 384 44.8
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 2.8e-86 323.2 333 52.6
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 1.4e-85 320.9 375 46.1
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 6.8e-85 318.5 380 48.2
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 1.5e-84 317.4 367 47.7
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 2.0e-84 317.0 289 59.5
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 9.8e-84 314.7 405 45.4
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 1.1e-82 311.2 440 43.0
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 4.1e-82 309.3 371 45.8
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 9.2e-82 308.1 352 50.9
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 1.2e-81 307.8 362 46.4
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 4.6e-81 305.8 381 44.6
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 4.6e-81 305.8 395 44.1
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 1.7e-80 303.9 416 42.5
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 3.9e-80 302.8 369 47.2
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 7.3e-79 298.5 318 49.7
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 1.1e-77 294.7 318 51.6
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 8.9e-77 291.6 375 42.1
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 1.5e-76 290.8 381 43.0
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 2.0e-76 290.4 375 41.9
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 2.0e-76 290.4 404 43.3
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 2.0e-76 290.4 388 46.9
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 3.8e-75 286.2 321 47.7
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 2.4e-74 283.5 391 42.2
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 2.7e-73 280.0 332 45.5
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 3.5e-73 279.6 287 50.2
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 4.6e-73 279.3 414 40.6
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 5.1e-72 275.8 346 46.8
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 1.6e-70 270.8 373 42.6
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 6.2e-70 268.9 433 38.1
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 6.9e-69 265.4 316 48.1
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 4.4e-68 262.7 309 50.8
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 4.4e-68 262.7 309 50.8
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 1.7e-67 260.8 389 39.6
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 3.8e-67 259.6 362 46.4
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 6.0e-65 252.3 366 41.5
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 9.3e-58 228.4 425 40.0
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 1.9e-55 220.7 174 59.8
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 4.0e-53 213.0 274 42.7
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 9.0e-53 211.8 274 42.7
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 1.2e-52 211.5 175 57.1
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 6.4e-51 205.7 284 43.0
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 1.4e-45 188.0 162 54.9
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 3.4e-44 183.3 367 34.6
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 1.2e-41 174.9 143 58.0
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 2.3e-40 170.6 284 39.8
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 3.8e-35 153.3 174 50.6
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 3.2e-34 150.2 184 53.8
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 5.5e-26 122.9 117 58.1
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.6e-25 121.3 83 68.7
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.6e-25 121.3 83 68.7
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 7.2e-18 95.9 376 24.7
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 3.0e-16 90.5 159 42.1
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 5.2e-16 89.7 157 37.6
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 1.5e-15 88.2 154 37.0
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 9.7e-15 85.5 108 44.4
HPP92_020432 Vanilla planifolia HOM05D000367 ORTHO05D008893 2.5e-10 70.9 89 49.4
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 2.0e-07 61.2 61 49.2


User provided reference genes

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