Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 1.3e-154 549.7 285 100.0
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 3.0e-85 319.3 281 61.9
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 2.5e-84 316.2 263 62.7
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 3.3e-84 315.8 278 60.8
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 5.6e-84 315.1 269 61.7
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 5.6e-84 315.1 260 63.8
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 5.6e-84 315.1 268 61.9
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 7.3e-84 314.7 270 62.6
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 3.6e-83 312.4 263 63.9
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 3.1e-82 309.3 240 65.4
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 1.2e-81 307.4 196 77.6
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 1.2e-81 307.4 196 77.6
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 2.6e-81 306.2 263 63.5
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 1.7e-80 303.5 271 58.7
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 4.9e-80 302.0 203 74.9
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 8.4e-80 301.2 254 62.6
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 8.4e-80 301.2 237 66.2
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 1.9e-79 300.1 261 60.9
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.9e-79 300.1 263 62.4
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 2.4e-79 299.7 274 58.8
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 7.1e-79 298.1 263 62.4
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 7.1e-79 298.1 262 58.8
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 1.6e-78 297.0 263 60.5
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 1.6e-78 297.0 202 71.8
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 2.7e-78 296.2 262 62.2
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 2.7e-78 296.2 197 70.6
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 4.6e-78 295.4 227 67.4
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 4.6e-78 295.4 262 57.3
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 7.8e-78 294.7 263 58.2
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 1.7e-77 293.5 263 62.0
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 3.9e-77 292.4 254 60.6
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 5.1e-77 292.0 196 70.4
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 6.6e-77 291.6 263 57.8
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 1.5e-76 290.4 262 58.4
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 3.3e-76 289.3 271 57.9
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 3.6e-75 285.8 270 58.1
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 4.7e-75 285.4 257 56.0
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 1.1e-74 284.3 268 57.5
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 1.8e-74 283.5 259 56.8
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 5.3e-74 282.0 282 56.0
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 5.3e-74 282.0 215 66.5
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 6.9e-74 281.6 265 60.0
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 1.5e-73 280.4 233 60.5
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 1.5e-73 280.4 196 71.4
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 2.0e-73 280.0 263 57.0
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 7.6e-73 278.1 252 58.7
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 2.2e-72 276.6 264 54.5
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 2.9e-72 276.2 200 67.5
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 3.8e-72 275.8 200 67.0
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 6.4e-72 275.0 255 54.9
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 8.4e-72 274.6 235 59.1
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.1e-71 274.2 214 64.0
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 1.1e-71 274.2 214 64.0
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.1e-71 274.2 235 59.1
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 1.1e-71 274.2 259 56.0
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 1.4e-71 273.9 255 57.6
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 1.4e-71 273.9 266 59.0
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 1.9e-71 273.5 255 56.9
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 7.1e-71 271.6 261 56.3
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 7.1e-71 271.6 252 59.9
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 9.3e-71 271.2 305 53.1
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.6e-70 270.4 266 55.6
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 2.1e-70 270.0 255 55.7
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 4.6e-70 268.9 231 58.9
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 4.6e-70 268.9 255 55.7
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 3.9e-69 265.8 315 51.4
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 1.5e-68 263.8 265 54.0
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 1.9e-68 263.5 268 53.7
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 7.3e-68 261.5 257 52.9
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 3.6e-67 259.2 251 57.8
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 3.4e-65 252.7 264 51.1
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 1.7e-64 250.4 270 48.9
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 3.8e-64 249.2 196 62.8
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 4.2e-63 245.7 265 54.7
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 4.2e-63 245.7 263 54.0
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 5.4e-63 245.4 271 53.9
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 3.5e-62 242.7 240 57.1
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 1.5e-60 237.3 268 52.2
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 1.9e-60 236.9 212 61.3
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 8.1e-59 231.5 263 52.9
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 5.3e-58 228.8 368 40.8
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 9.0e-58 228.0 298 48.3
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 3.2e-55 219.5 147 69.4
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 1.0e-53 214.5 218 54.6
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 3.0e-53 213.0 225 52.9
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 1.2e-49 201.1 266 45.9
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 3.2e-47 193.0 241 43.6
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 3.3e-44 183.0 274 39.4
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 4.1e-42 176.0 260 40.4
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 6.5e-40 168.7 197 44.2
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 9.7e-36 154.8 96 74.0
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 4.8e-35 152.5 95 77.9
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 6.3e-35 152.1 141 58.2
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 1.4e-34 151.0 130 60.8
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 5.5e-31 139.0 190 40.0
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 9.7e-28 128.3 157 48.4
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 1.2e-25 121.3 185 38.4
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 3.2e-23 113.2 114 57.0
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 8.0e-22 108.6 209 34.0
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 1.8e-18 97.4 175 36.0
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 2.4e-18 97.1 117 38.5
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 2.0e-17 94.0 141 46.1
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.9e-16 90.1 90 51.1
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 3.8e-16 89.7 62 62.9


User provided reference genes

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