Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.1e-284 982.6 516 100.0
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.7e-68 263.8 623 35.2
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.7e-68 263.8 620 35.0
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 1.1e-48 198.7 605 31.1
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 1.4e-48 198.4 646 31.7
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 2.4e-48 197.6 518 33.0
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 2.6e-47 194.1 490 34.5
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 2.6e-47 194.1 612 29.2
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 5.8e-47 193.0 593 31.2
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.6e-47 192.6 598 31.1
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 1.9e-45 188.0 601 31.4
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 3.2e-45 187.2 623 31.6
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.6e-44 184.9 583 30.5
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.1e-44 184.5 598 30.3
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 1.0e-43 182.2 575 29.7
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 3.9e-43 180.3 637 29.5
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 6.6e-43 179.5 618 28.3
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.3e-41 175.3 600 30.2
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 8.1e-41 172.6 288 41.7
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 8.1e-41 172.6 664 29.5
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.9e-40 169.5 602 30.1
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 3.4e-39 167.2 557 31.8
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 1.7e-38 164.9 506 31.2
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.8e-38 163.7 629 29.4
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 2.4e-37 161.0 552 29.9
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.4e-37 159.8 630 28.9
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.6e-36 158.3 628 28.2
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 2.1e-36 157.9 554 28.2
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 6.0e-36 156.4 332 38.3
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.3e-35 155.2 604 29.5
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.3e-35 155.2 643 27.2
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 5.1e-35 153.3 567 29.1
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 4.3e-34 150.2 635 28.5
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 9.6e-34 149.1 587 28.8
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 2.1e-33 147.9 543 29.5
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.1e-33 147.9 320 35.6
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 3.7e-33 147.1 311 34.7
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 4.8e-33 146.7 311 34.7
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 6.2e-33 146.4 617 28.0
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 6.2e-33 146.4 609 25.8
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 4.0e-32 143.7 549 27.5
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 2.0e-31 141.4 546 29.3
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 3.4e-31 140.6 608 27.6
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 4.5e-31 140.2 535 28.6
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 5.8e-31 139.8 595 27.4
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 7.6e-31 139.4 536 28.9
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 1.7e-30 138.3 750 25.7
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 3.8e-30 137.1 587 27.6
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 4.9e-30 136.7 629 26.4
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 2.5e-29 134.4 434 31.6
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 5.5e-29 133.3 539 27.6
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 5.5e-29 133.3 575 27.0
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 5.5e-29 133.3 166 42.8
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.6e-28 131.7 602 25.7
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 2.7e-28 131.0 304 33.2
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 3.5e-28 130.6 239 37.2
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 4.6e-28 130.2 716 24.9
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 6.0e-28 129.8 662 27.0
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 7.9e-28 129.4 431 31.8
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 7.9e-28 129.4 660 26.5
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 1.3e-27 128.6 572 26.4
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 1.8e-27 128.3 666 26.3
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 1.8e-27 128.3 585 26.3
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 2.3e-27 127.9 524 29.2
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 5.1e-27 126.7 435 29.0
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 4.3e-26 123.6 192 40.1
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 4.3e-26 123.6 683 25.0
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.6e-25 121.7 733 23.9
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 6.2e-25 119.8 484 27.7
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.4e-24 118.6 404 30.7
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 1.8e-24 118.2 297 32.3
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.5e-23 115.2 576 25.2
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.0e-23 114.8 145 44.1
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 3.4e-23 114.0 163 37.4
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.4e-23 114.0 207 37.7
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 4.5e-23 113.6 217 34.6
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.7e-22 111.7 323 30.3
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 6.5e-22 109.8 286 31.1
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 8.4e-22 109.4 532 26.5
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.1e-21 109.0 386 29.3
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 1.4e-21 108.6 146 41.1
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.9e-21 108.2 487 26.7
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 2.5e-21 107.8 250 32.4
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 2.1e-20 104.8 329 29.2
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 4.6e-20 103.6 219 32.0
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.0e-19 102.4 262 28.6
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 2.3e-19 101.3 261 31.4
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 2.3e-19 101.3 694 22.6
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 2.3e-19 101.3 474 25.9
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 5.1e-19 100.1 611 24.1
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 6.7e-19 99.8 367 29.4
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.5e-18 98.6 168 36.3
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 5.7e-18 96.7 285 27.7
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 9.7e-18 95.9 264 33.3
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 5.3e-16 90.1 494 27.3
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 2.0e-15 88.2 440 27.5
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 5.0e-14 83.6 305 27.9
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 2.5e-13 81.3 152 34.2
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 9.4e-13 79.3 162 30.9
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 9.4e-13 79.3 222 31.1
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 9.4e-13 79.3 162 32.1
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 1.4e-11 75.5 80 42.5
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 1.4e-11 75.5 480 25.0
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 3.0e-11 74.3 121 39.7
Aa31LG3G12750 Aethionema arabicum HOM05D006771 ORTHO05D008296 1.1e-10 72.4 399 29.1
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 4.3e-10 70.5 86 37.2
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 4.3e-10 70.5 86 37.2
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.0e-07 61.6 267 28.1
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 3.8e-06 57.4 81 38.3


User provided reference genes

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