Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 1.2e-197 693.0 339 100.0
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 3.2e-147 525.4 337 73.6
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 6.1e-146 521.2 341 72.7
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 5.2e-145 518.1 339 73.2
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 3.4e-144 515.4 335 74.3
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 9.8e-144 513.8 340 72.6
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 2.0e-141 506.1 337 71.5
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 7.7e-141 504.2 334 71.9
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 1.7e-140 503.1 302 77.8
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 2.3e-140 502.7 332 71.4
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 2.3e-140 502.7 298 77.2
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 3.8e-140 501.9 337 72.4
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 3.8e-140 501.9 309 75.4
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 5.0e-140 501.5 337 72.4
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 5.0e-140 501.5 336 72.6
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 5.0e-140 501.5 340 71.2
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 6.5e-140 501.1 312 74.4
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.5e-139 500.0 336 72.3
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 1.5e-139 500.0 338 71.6
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 1.9e-139 499.6 339 72.6
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 4.2e-139 498.4 313 74.4
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 9.5e-139 497.3 303 75.6
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 9.5e-139 497.3 313 74.1
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 6.1e-138 494.6 340 69.7
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 1.8e-137 493.0 337 70.3
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 2.3e-137 492.7 313 74.1
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 4.0e-137 491.9 343 70.0
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 6.8e-137 491.1 338 69.5
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 6.8e-137 491.1 284 76.4
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 1.2e-136 490.3 337 70.6
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 2.6e-136 489.2 333 73.6
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 2.2e-135 486.1 301 74.4
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 2.8e-135 485.7 284 77.1
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 4.9e-135 485.0 341 67.2
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 4.9e-135 485.0 285 76.5
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 3.1e-134 482.3 285 75.8
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 4.1e-134 481.9 340 67.4
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 7.0e-134 481.1 328 67.4
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 5.9e-133 478.0 331 70.4
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 7.8e-133 477.6 290 76.2
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 1.0e-132 477.2 304 73.0
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 1.0e-132 477.2 335 69.3
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 1.3e-132 476.9 299 73.6
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.7e-132 476.5 338 68.0
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 1.7e-132 476.5 311 74.3
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 2.9e-132 475.7 332 70.5
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 2.9e-132 475.7 334 69.8
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 5.0e-132 474.9 334 71.9
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 5.0e-132 474.9 336 68.2
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 6.6e-132 474.6 285 76.5
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 8.6e-132 474.2 291 74.6
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 3.3e-131 472.2 284 75.4
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 5.6e-131 471.5 284 76.1
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 5.6e-131 471.5 339 68.4
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 7.3e-131 471.1 343 67.3
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 2.8e-130 469.2 335 69.0
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 4.7e-130 468.4 334 69.8
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 8.0e-130 467.6 334 68.6
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 1.0e-129 467.2 329 68.7
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 1.4e-129 466.8 307 72.0
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 3.4e-128 462.2 341 66.3
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 3.4e-128 462.2 345 66.1
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 7.5e-128 461.1 308 71.8
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 7.5e-128 461.1 334 68.9
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 9.8e-128 460.7 308 71.8
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 1.7e-127 459.9 299 74.6
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 2.2e-127 459.5 341 65.7
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 2.9e-127 459.1 310 70.6
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 4.9e-127 458.4 317 69.1
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 6.4e-127 458.0 334 68.0
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 1.1e-126 457.2 336 67.9
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 1.1e-126 457.2 336 67.9
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 1.9e-126 456.4 309 68.3
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 3.5e-125 452.2 326 66.9
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 4.6e-125 451.8 270 75.6
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 1.0e-124 450.7 333 66.1
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 1.1e-123 447.2 290 69.7
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 1.5e-123 446.8 308 64.6
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 3.6e-122 442.2 289 72.7
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 6.8e-121 438.0 326 64.7
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 8.9e-121 437.6 285 70.5
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 3.4e-120 435.6 344 64.5
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 8.6e-116 421.0 317 63.1
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 5.2e-113 411.8 248 75.8
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 5.8e-112 408.3 284 68.3
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 3.2e-110 402.5 247 76.5
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 1.3e-108 397.1 244 73.8
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 8.6e-108 394.4 244 76.6
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 1.5e-107 393.7 307 59.3
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 9.5e-107 391.0 326 58.3
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 2.6e-104 382.9 244 69.7
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 1.7e-103 380.2 319 58.3
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 1.9e-102 376.7 341 57.5
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 7.8e-101 371.3 289 58.8
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 4.4e-96 355.5 287 57.8
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 6.4e-95 351.7 252 69.0
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 5.6e-83 312.0 195 72.3
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 4.3e-75 285.8 308 49.0
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 9.7e-67 258.1 169 71.0
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 6.3e-58 228.8 143 71.3
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 1.7e-50 204.1 115 77.4
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 4.5e-48 196.1 109 76.1
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.1e-46 191.4 127 70.9
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 9.1e-41 171.8 105 77.1
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 5.0e-39 166.0 287 35.2
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.0e-36 158.3 111 64.0
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 8.3e-34 148.7 155 51.0
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 3.8e-31 139.8 121 58.7
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 2.6e-27 127.1 85 72.9
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 2.1e-21 107.5 141 46.1
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 1.0e-15 88.6 55 70.9
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 2.5e-14 84.0 84 54.8
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 5.2e-12 76.3 49 63.3
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 1.5e-11 74.7 40 80.0
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.0e-08 64.3 42 69.0


User provided reference genes

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