Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G2577 Punica granatum HOM05D009419 ORTHO05D011473 3.8e-146 521.5 272 100.0
PGR031G3289 Punica granatum HOM05D009419 ORTHO05D011473 3.7e-101 372.1 279 72.0
Eucgr.B03921 Eucalyptus grandis HOM05D009419 ORTHO05D011473 1.1e-39 167.9 268 42.2
Ciclev10029167m.g Citrus clementina HOM05D009419 ORTHO05D011473 1.7e-29 134.0 215 35.3
Dinv16239 Davidia involucrata HOM05D009419 ORTHO05D011473 1.3e-26 124.4 206 39.3
Gohir.A07G105100 Gossypium hirsutum HOM05D009419 ORTHO05D011473 2.1e-24 117.1 211 37.4
Gohir.D07G109200 Gossypium hirsutum HOM05D009419 ORTHO05D011473 2.1e-24 117.1 212 36.8
Gorai.001G117300 Gossypium raimondii HOM05D009419 ORTHO05D011473 2.1e-24 117.1 212 36.8
COL.COLO4_19208 Corchorus olitorius HOM05D009419 ORTHO05D011473 1.1e-23 114.8 208 34.6
Duzib150G0155 Durio zibethinus HOM05D009419 ORTHO05D011473 2.4e-23 113.6 211 33.6
TAR633G1436 Trochodendron aralioides HOM05D009419 ORTHO05D011473 9.0e-23 111.7 237 32.9
MELO3C026957.2 Cucumis melo HOM05D009419 ORTHO05D011473 1.5e-22 110.9 199 35.2
CsaV3_6G014420 Cucumis sativus L. HOM05D009419 ORTHO05D011473 1.5e-22 110.9 202 35.1
Thecc.09G297700 Theobroma cacao HOM05D009419 ORTHO05D011473 2.0e-22 110.5 214 34.1
ClCG02G021680 Citrullus lanatus HOM05D009419 ORTHO05D011473 5.8e-22 109.0 212 31.6
CANSAT64G0909 Cannabis sativa HOM05D009419 ORTHO05D011473 7.6e-22 108.6 226 35.0
Duzib168G0860 Durio zibethinus HOM05D009419 ORTHO05D011473 1.7e-21 107.5 241 33.2
PSO339G4034 Papaver somniferum HOM05D009419 ORTHO05D011473 3.2e-20 103.2 291 29.6
Nitab4.5_0000173g0200 Nicotiana tabacum HOM05D009419 ORTHO05D011473 2.1e-19 100.5 257 30.0
Nitab4.5_0003880g0030 Nicotiana tabacum HOM05D009419 ORTHO05D011473 7.9e-19 98.6 236 30.5
PSO801G0785 Papaver somniferum HOM05D009419 ORTHO05D011473 1.3e-18 97.8 290 29.7
Solyc11g066460.1 Solanum lycopersicum HOM05D009419 ORTHO05D011473 5.1e-18 95.9 239 30.5
Sopen11g026210 Solanum pennellii HOM05D009419 ORTHO05D011473 1.9e-17 94.0 240 32.1
Sed0027206 Sechium edule HOM05D009419 ORTHO05D011473 1.6e-16 90.9 210 28.6
Peaxi162Scf00983g00005 Petunia axillaris HOM05D009419 ORTHO05D011473 9.0e-15 85.1 245 29.8
Nn2g13875 Nelumbo nucifera HOM05D009419 ORTHO05D011473 1.1e-12 78.2 103 43.7
Nitab4.5_0008264g0010 Nicotiana tabacum HOM05D000538 ORTHO05D000614 9.3e-12 75.1 235 27.2
Nitab4.5_0000786g0080 Nicotiana tabacum HOM05D000538 ORTHO05D000614 1.2e-11 74.7 235 27.2
CANSAT54G1163 Cannabis sativa HOM05D000538 ORTHO05D000614 7.4e-09 65.5 230 26.1
Lalb_Chr16g0392201 Lupinus albus HOM05D000538 ORTHO05D000614 9.6e-09 65.1 241 24.9
TAR627G0243 Trochodendron aralioides HOM05D000538 ORTHO05D000614 2.8e-08 63.5 235 25.1
CDE05G1513 Ceratophyllum demersum HOM05D000538 ORTHO05D000614 3.7e-08 63.2 238 26.9
Duzib248G0414 Durio zibethinus HOM05D000538 ORTHO05D000614 8.1e-08 62.0 240 27.5
MD05G1335900 Malus domestica HOM05D000538 ORTHO05D000614 1.4e-07 61.2 276 23.2
A03p67190 Brassica napus HOM05D000538 ORTHO05D000614 1.8e-07 60.8 239 25.5
BraA01t02756Z Brassica rapa HOM05D000538 ORTHO05D000614 1.8e-07 60.8 239 25.5
ATR1158G014 Amborella trichopoda HOM05D000538 ORTHO05D000614 2.4e-07 60.5 240 25.8
TWI38G1831 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 2.4e-07 60.5 237 23.6
ATR0757G030 Amborella trichopoda HOM05D000538 ORTHO05D000614 4.0e-07 59.7 298 23.8
AL3G48460 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 4.0e-07 59.7 220 25.0
A05p42680 Brassica napus HOM05D000538 ORTHO05D000614 4.0e-07 59.7 117 32.5
BraA05t22985Z Brassica rapa HOM05D000538 ORTHO05D000614 4.0e-07 59.7 117 32.5
CiPaw.07G007200 Carya illinoinensis HOM05D000538 ORTHO05D000614 4.0e-07 59.7 114 34.2
Migut.D02300 Erythranthe guttata HOM05D009419 ORTHO05D011473 4.0e-07 59.7 101 37.6
Dinv18944 Davidia involucrata HOM05D000538 ORTHO05D000614 5.3e-07 59.3 237 24.1
VMungo0540G1345 Vigna mungo HOM05D000538 ORTHO05D000614 5.3e-07 59.3 258 24.8
CiPaw.09G080200 Carya illinoinensis HOM05D000538 ORTHO05D000614 6.9e-07 58.9 247 25.1
Phvul.006G196300 Phaseolus vulgaris HOM05D000538 ORTHO05D000614 9.0e-07 58.5 255 25.1
TWI38G2394 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 9.0e-07 58.5 249 26.1
Hma1.2p1_0083F.1_g042780 Hydrangea macrophylla HOM05D000538 ORTHO05D000614 1.5e-06 57.8 108 34.3
Lj6g0024738 Lotus japonicus HOM05D000538 ORTHO05D000614 2.0e-06 57.4 247 25.5
Psat1g211120 Pisum sativum HOM05D000538 ORTHO05D000614 2.0e-06 57.4 217 25.8
TWI38G2228 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 2.0e-06 57.4 239 25.9
VMungo0540G0362 Vigna mungo HOM05D000538 ORTHO05D011169 2.0e-06 57.4 217 24.9
BcaB04g19646 Brassica carinata HOM05D000538 ORTHO05D000614 2.6e-06 57.0 111 34.2
QL93p0073_1288 Quercus lobata HOM05D000538 ORTHO05D000614 2.6e-06 57.0 244 28.3
Actinidia33844 Actinidia chinensis HOM05D000538 ORTHO05D000614 3.4e-06 56.6 112 36.6
Glyma.13G251000 Glycine max HOM05D000538 ORTHO05D000614 3.4e-06 56.6 255 23.5
Glyma.15G063300 Glycine max HOM05D000538 ORTHO05D000614 3.4e-06 56.6 256 23.8
Peaxi162Scf00030g00224 Petunia axillaris HOM05D000538 ORTHO05D000614 3.4e-06 56.6 285 26.0
Sc20g0000210 Simmondsia chinensis HOM05D000538 ORTHO05D000614 3.4e-06 56.6 112 34.8
BcaC02g10543 Brassica carinata HOM05D000538 ORTHO05D000614 4.5e-06 56.2 232 25.0
BcaC04g23709 Brassica carinata HOM05D000538 ORTHO05D000614 4.5e-06 56.2 109 33.9
C04p27660 Brassica napus HOM05D000538 ORTHO05D000614 4.5e-06 56.2 232 25.0
C09p05510 Brassica napus HOM05D000538 ORTHO05D000614 4.5e-06 56.2 109 33.9
BolC4t24311H Brassica oleracea HOM05D000538 ORTHO05D000614 4.5e-06 56.2 232 25.0
BolC9t53480H Brassica oleracea HOM05D000538 ORTHO05D000614 4.5e-06 56.2 109 33.9
CSS0046322 Camellia sinensis var. sinensis HOM05D000538 ORTHO05D000614 5.8e-06 55.8 107 30.8
COL.COLO4_15268 Corchorus olitorius HOM05D000538 ORTHO05D000614 5.8e-06 55.8 116 35.3
CsaV3_UNG143080 Cucumis sativus L. HOM05D009419 ORTHO05D011473 5.8e-06 55.8 79 38.0
Migut.H01546 Erythranthe guttata HOM05D000538 ORTHO05D000614 5.8e-06 55.8 149 31.5
Thhalv10020724m.g Eutrema salsugineum HOM05D000538 ORTHO05D000614 5.8e-06 55.8 109 34.9
Sp2g02820 Schrenkiella parvula HOM05D000538 ORTHO05D000614 5.8e-06 55.8 241 21.6
AT3G04930 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 7.6e-06 55.5 109 34.9
CARHR079210 Cardamine hirsuta HOM05D000538 ORTHO05D000614 7.6e-06 55.5 110 34.5
COL.COLO4_13007 Corchorus olitorius HOM05D000538 ORTHO05D000614 7.6e-06 55.5 236 25.0
Dinv18544 Davidia involucrata HOM05D000538 ORTHO05D000614 7.6e-06 55.5 293 26.3
Migut.M01263 Erythranthe guttata HOM05D000538 ORTHO05D000614 7.6e-06 55.5 109 30.3
FvH4_3g02930 Fragaria vesca HOM05D000538 ORTHO05D000614 7.6e-06 55.5 228 25.0
THA.LOC104802821 Tarenaya hassleriana HOM05D000538 ORTHO05D000614 7.6e-06 55.5 110 37.3
Aa31LG11G8790 Aethionema arabicum HOM05D000538 ORTHO05D000614 1.0e-05 55.1 109 34.9
AL3G15240 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 1.0e-05 55.1 109 34.9
BcaB04g17138 Brassica carinata HOM05D000538 ORTHO05D000614 1.0e-05 55.1 116 29.3
C07p40420 Brassica napus HOM05D000538 ORTHO05D003297 1.0e-05 55.1 112 36.6
BolC7t44577H Brassica oleracea HOM05D000538 ORTHO05D003297 1.0e-05 55.1 112 36.6
Carub.0003s0414 Capsella rubella HOM05D000538 ORTHO05D000614 1.0e-05 55.1 109 34.9
Cpa.g.sc264.16 Carica papaya HOM05D000538 ORTHO05D000614 1.0e-05 55.1 114 35.1
FAN21G0633 Fragaria x ananassa HOM05D000538 ORTHO05D000614 1.0e-05 55.1 227 26.0
FAN21G1131 Fragaria x ananassa HOM05D000538 ORTHO05D000614 1.0e-05 55.1 227 26.0
FAN25G1625 Fragaria x ananassa HOM05D000538 ORTHO05D000614 1.0e-05 55.1 234 25.6


User provided reference genes

Program Settings