Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G2256 Punica granatum HOM05D003171 ORTHO05D000921 2.4e-145 518.8 264 100.0
PGR042G1121 Punica granatum HOM05D003171 ORTHO05D000921 1.1e-139 500.0 264 96.2
PGR083G0806 Punica granatum HOM05D003171 ORTHO05D000921 5.6e-139 497.7 264 96.2
PGR142G1110 Punica granatum HOM05D003171 ORTHO05D000921 5.6e-139 497.7 264 96.2
PGR142G2502 Punica granatum HOM05D003171 ORTHO05D000921 5.6e-139 497.7 264 96.2
PGR102G1426 Punica granatum HOM05D003171 ORTHO05D000921 9.6e-139 496.9 264 95.8
PGR083G2390 Punica granatum HOM05D003171 ORTHO05D000921 6.2e-138 494.2 264 96.6
PGR031G3942 Punica granatum HOM05D003171 ORTHO05D000921 8.1e-138 493.8 264 95.8
PGR102G1332 Punica granatum HOM05D003171 ORTHO05D000921 8.4e-135 483.8 264 93.6
PGR102G2917 Punica granatum HOM05D003171 ORTHO05D000921 5.7e-131 471.1 264 91.7
PGR083G2107 Punica granatum HOM05D003171 ORTHO05D000921 2.1e-130 469.2 264 91.3
PGR142G3438 Punica granatum HOM05D003171 ORTHO05D000921 7.6e-128 460.7 264 90.9
PGR119G1897 Punica granatum HOM05D003171 ORTHO05D000921 1.6e-125 453.0 255 92.2
PGR083G2830 Punica granatum HOM05D003171 ORTHO05D000921 2.8e-122 442.2 233 97.0
PGR004G0383 Punica granatum HOM05D003171 ORTHO05D000921 3.2e-110 402.1 264 76.5
PGR042G0470 Punica granatum HOM05D003171 ORTHO05D000921 5.5e-110 401.4 264 76.1
PGR044G0862 Punica granatum HOM05D003171 ORTHO05D000921 2.1e-109 399.4 264 76.5
PGR102G1953 Punica granatum HOM05D003171 ORTHO05D000921 2.1e-109 399.4 264 76.5
PGR031G0833 Punica granatum HOM05D003171 ORTHO05D000921 1.4e-108 396.7 264 75.8
PGR042G0219 Punica granatum HOM05D003171 ORTHO05D000921 6.7e-108 394.4 264 75.4
PGR044G1317 Punica granatum HOM05D003171 ORTHO05D000921 1.5e-86 323.6 264 62.5
PGR142G3616 Punica granatum HOM05D003171 ORTHO05D000921 6.1e-77 291.6 262 55.3
PGR119G2496 Punica granatum HOM05D003171 ORTHO05D000921 1.2e-72 277.3 264 51.9
PGR142G0886 Punica granatum HOM05D003171 ORTHO05D000921 7.8e-72 274.6 264 51.5
PGR042G2130 Punica granatum HOM05D003171 ORTHO05D000921 2.2e-66 256.5 239 52.7
PGR031G1247 Punica granatum HOM05D003171 ORTHO05D000921 3.2e-65 252.7 167 76.0
PGR031G3747 Punica granatum HOM05D003171 ORTHO05D000921 7.0e-65 251.5 203 63.5
PGR119G0399 Punica granatum HOM05D003171 ORTHO05D000921 4.9e-58 228.8 140 80.0
PGR102G1972 Punica granatum HOM05D003171 ORTHO05D000921 1.2e-56 224.2 172 63.4
PGR102G1281 Punica granatum HOM05D003171 ORTHO05D000921 4.0e-52 209.1 260 45.8
PGR004G0260 Punica granatum HOM05D003171 ORTHO05D000921 1.2e-51 207.6 257 43.2
PGR102G0976 Punica granatum HOM05D003171 ORTHO05D000921 2.0e-51 206.8 260 45.0
PGR142G2636 Punica granatum HOM05D003171 ORTHO05D000921 9.9e-51 204.5 257 42.8
PGR004G1433 Punica granatum HOM05D003171 ORTHO05D000921 1.3e-50 204.1 257 42.8
PGR031G2473 Punica granatum HOM05D003171 ORTHO05D000921 3.7e-50 202.6 258 43.4
PGR142G3043 Punica granatum HOM05D003171 ORTHO05D000921 8.4e-50 201.4 257 42.4
PGR102G0211 Punica granatum HOM05D003171 ORTHO05D000921 1.9e-49 200.3 251 45.8
PGR042G0562 Punica granatum HOM05D003171 ORTHO05D000921 5.4e-49 198.7 257 42.0
PGR042G3316 Punica granatum HOM05D003171 ORTHO05D000921 5.4e-49 198.7 259 42.9
PGR142G1768 Punica granatum HOM05D003171 ORTHO05D000921 2.7e-48 196.4 264 40.2
PGR045G0004 Punica granatum HOM05D003171 ORTHO05D000921 3.5e-48 196.1 252 42.5
PGR119G1784 Punica granatum HOM05D003171 ORTHO05D000037 3.5e-48 196.1 246 45.1
PGR142G1171 Punica granatum HOM05D003171 ORTHO05D000921 3.9e-47 192.6 248 42.3
PGR142G2608 Punica granatum HOM05D003171 ORTHO05D000921 5.1e-47 192.2 243 44.4
PGR042G0711 Punica granatum HOM05D003171 ORTHO05D000921 1.5e-46 190.7 260 39.2
PGR031G0230 Punica granatum HOM05D003171 ORTHO05D000921 8.1e-45 184.9 232 43.1
PGR031G1431 Punica granatum HOM05D003171 ORTHO05D000921 8.1e-45 184.9 235 43.4
PGR142G0920 Punica granatum HOM05D003171 ORTHO05D000921 7.6e-43 178.3 205 46.8
PGR044G2193 Punica granatum HOM05D003171 ORTHO05D000921 9.9e-43 177.9 208 44.7
PGR031G3762 Punica granatum HOM05D003171 ORTHO05D000921 1.7e-42 177.2 232 42.7
PGR031G0788 Punica granatum HOM05D003171 ORTHO05D000921 1.6e-40 170.6 237 41.8
PGR119G0096 Punica granatum HOM05D003171 ORTHO05D000921 3.5e-40 169.5 205 44.9
PGR031G1004 Punica granatum HOM05D003171 ORTHO05D000921 7.8e-40 168.3 106 79.2
PGR004G1529 Punica granatum HOM05D003171 ORTHO05D000921 7.3e-38 161.8 190 46.8
PGR031G1123 Punica granatum HOM05D003171 ORTHO05D000921 2.9e-34 149.8 204 41.2
PGR119G0556 Punica granatum HOM05D003171 ORTHO05D000921 1.2e-32 144.4 224 41.5
PGR004G1821 Punica granatum HOM05D003171 ORTHO05D000921 7.6e-27 125.2 158 43.0
PGR004G1743 Punica granatum HOM05D003171 ORTHO05D000921 4.9e-26 122.5 206 39.8
PGR031G1928 Punica granatum HOM05D000034 ORTHO05D000037 8.1e-21 105.1 180 37.8
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 1.2e-19 101.3 261 28.7
PGR031G3489 Punica granatum HOM05D003171 ORTHO05D000921 1.2e-19 101.3 262 32.1
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 3.2e-17 93.2 261 30.3
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 3.2e-17 93.2 261 30.3
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 7.1e-17 92.0 264 30.7
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 2.7e-16 90.1 146 37.0
Oeu059221.1 Olea europaea HOM05D003171 ORTHO05D000921 3.5e-16 89.7 256 31.6
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 7.9e-16 88.6 249 29.3
Oeu052247.2 Olea europaea HOM05D003171 ORTHO05D000921 1.0e-15 88.2 174 34.5
ECA246G1509 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.8e-15 87.4 244 29.1
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 1.8e-15 87.4 146 36.3
Ciclev10024555m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.3e-15 87.0 167 32.3
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 2.3e-15 87.0 146 36.3
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 2.3e-15 87.0 146 36.3
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 2.3e-15 87.0 146 36.3
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 2.3e-15 87.0 146 36.3
Ciclev10006620m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.9e-15 86.3 138 34.8
COL.COLO4_15868 Corchorus olitorius HOM05D003171 ORTHO05D000921 5.1e-15 85.9 120 38.3
Lj6g0024631 Lotus japonicus HOM05D003171 ORTHO05D000921 5.1e-15 85.9 170 34.7
Hma1.2p1_1940F.1_g308350 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 8.7e-15 85.1 220 29.5
CSS0041232 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.1e-14 84.7 124 36.3
Hma1.2p1_0471F.1_g159430 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 2.5e-14 83.6 172 32.0
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 2.5e-14 83.6 142 36.6
Oeu046730.1 Olea europaea HOM05D003171 ORTHO05D000921 3.3e-14 83.2 130 40.0
Oeu059139.1 Olea europaea HOM05D003171 ORTHO05D000921 5.7e-14 82.4 131 38.2
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 7.4e-14 82.0 112 35.7
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 7.4e-14 82.0 183 32.2
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 7.4e-14 82.0 246 28.0
Atru.chr5.3274 Acer truncatum HOM05D003171 ORTHO05D000921 9.6e-14 81.6 93 43.0
FvH4_7g00340 Fragaria vesca HOM05D003171 ORTHO05D000921 2.8e-13 80.1 84 44.0
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 4.8e-13 79.3 129 34.9
Lj5g0008420 Lotus japonicus HOM05D003171 ORTHO05D000921 8.2e-13 78.6 109 43.1
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 1.4e-12 77.8 265 24.9
Lsat_1_v5_gn_1_68500 Lactuca sativa HOM05D003171 ORTHO05D000921 1.8e-12 77.4 248 27.4
Lsat_1_v5_gn_8_44140 Lactuca sativa HOM05D003171 ORTHO05D000921 2.4e-12 77.0 103 37.9
Nn3g19280 Nelumbo nucifera HOM05D000665 ORTHO05D000140 3.1e-12 76.6 265 27.2
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 3.1e-12 76.6 253 27.7
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 3.1e-12 76.6 253 27.7
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 3.1e-12 76.6 250 26.8
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 5.3e-12 75.9 260 28.1
Lsat_1_v5_gn_5_73681 Lactuca sativa HOM05D003171 ORTHO05D000921 1.2e-11 74.7 248 26.6
TWI36G0176 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.0e-11 73.9 238 27.7
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.4e-11 73.2 256 25.0
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 5.9e-11 72.4 207 28.5
FvH4_4g13820 Fragaria vesca HOM05D003171 ORTHO05D000921 7.6e-11 72.0 88 36.4
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 7.6e-11 72.0 249 25.3
Oeu010697.1 Olea europaea HOM05D003171 ORTHO05D000921 1.3e-10 71.2 251 26.7
TWI34G0686 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.9e-10 70.1 238 26.1
Ciclev10013577m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.0e-10 69.3 115 36.5
Potri.017G120900 Populus trichocarpa HOM05D003171 ORTHO05D000921 5.0e-10 69.3 253 26.5
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 1.1e-09 68.2 265 29.1
Prupe.6G193000 Prunus persica HOM05D003171 ORTHO05D000921 1.4e-09 67.8 157 29.3
PGR044G1109 Punica granatum HOM05D003171 ORTHO05D000921 1.4e-09 67.8 143 28.0
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.9e-09 67.4 265 24.9
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 3.2e-09 66.6 100 36.0
CANSAT01G1895 Cannabis sativa HOM05D003171 ORTHO05D000921 4.2e-09 66.2 144 29.2
Ciclev10017608m.g Citrus clementina HOM05D003171 ORTHO05D000921 4.2e-09 66.2 87 39.1
CiPaw.08G101500 Carya illinoinensis HOM05D003171 ORTHO05D000921 5.5e-09 65.9 259 25.5
Lsat_1_v5_gn_9_41001 Lactuca sativa HOM05D003171 ORTHO05D000921 5.5e-09 65.9 103 35.0
Ciclev10010650m.g Citrus clementina HOM05D003171 ORTHO05D000921 9.3e-09 65.1 75 37.3
QL10p052222 Quercus lobata HOM05D003171 ORTHO05D000921 1.6e-08 64.3 253 25.3
Atru.chr6.630 Acer truncatum HOM05D003171 ORTHO05D000921 2.1e-08 63.9 176 25.6
CANSAT35G1351 Cannabis sativa HOM05D000665 ORTHO05D000921 2.1e-08 63.9 88 37.5
Ciclev10028952m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.1e-08 63.9 104 30.8
CANSAT54G2744 Cannabis sativa HOM05D003171 ORTHO05D000921 2.7e-08 63.5 82 34.1
Atru.chr2.1871 Acer truncatum HOM05D001008 ORTHO05D003293 3.6e-08 63.2 71 40.8
Prupe.8G117400 Prunus persica HOM05D003171 ORTHO05D000921 6.1e-08 62.4 107 34.6
QL03p032583 Quercus lobata HOM05D000034 ORTHO05D000921 6.1e-08 62.4 125 32.0
QL04p024672 Quercus lobata HOM05D000034 ORTHO05D000921 6.1e-08 62.4 125 32.0
CiPaw.10G123700 Carya illinoinensis HOM05D003171 ORTHO05D000921 7.9e-08 62.0 259 25.9
PSO384G1197 Papaver somniferum HOM05D003171 ORTHO05D000921 1.0e-07 61.6 179 30.2
PSO675G2453 Papaver somniferum HOM05D003171 ORTHO05D000921 1.0e-07 61.6 97 37.1
vmacro16933 Vaccinium macrocarpon HOM05D003171 ORTHO05D000037 1.0e-07 61.6 95 33.7
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 1.3e-07 61.2 250 25.6
CANSAT35G0983 Cannabis sativa HOM05D003171 ORTHO05D000921 1.8e-07 60.8 79 35.4
TPR.G16880 Trifolium pratense HOM05D000665 ORTHO05D000921 1.8e-07 60.8 85 36.5
CANSAT80G1832 Cannabis sativa HOM05D000034 ORTHO05D000921 2.3e-07 60.5 85 36.5
Hma1.2p1_0279F.1_g112360 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 2.3e-07 60.5 123 32.5
Medtr3g053640 Medicago truncatula HOM05D003171 ORTHO05D000921 3.0e-07 60.1 247 23.5
TPR.G13935 Trifolium pratense HOM05D000665 ORTHO05D000921 3.0e-07 60.1 129 29.5
Atru.chr8.561 Acer truncatum HOM05D000034 ORTHO05D000037 5.1e-07 59.3 112 31.2
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 5.1e-07 59.3 252 26.2
QL10p054458 Quercus lobata HOM05D003171 ORTHO05D000921 5.1e-07 59.3 249 26.1
CiPaw.01G106700 Carya illinoinensis HOM05D003171 ORTHO05D000921 6.7e-07 58.9 252 27.0
Glyma.02G173400 Glycine max HOM05D003171 ORTHO05D000921 6.7e-07 58.9 219 28.8
PSO675G0791 Papaver somniferum HOM05D000034 ORTHO05D000037 8.7e-07 58.5 64 45.3
vmacro11323 Vaccinium macrocarpon HOM05D009321 ORTHO05D000285 8.7e-07 58.5 178 26.4
CANSAT01G1528 Cannabis sativa HOM05D000665 ORTHO05D000921 1.1e-06 58.2 144 27.8
Eucgr.C01733 Eucalyptus grandis HOM05D000665 ORTHO05D000285 1.5e-06 57.8 170 27.6
CiPaw.10G092200 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.9e-06 57.4 101 31.7
Rhsim07G0109100 Rhododendron simsii HOM05D021294 ORTHO05D000921 1.9e-06 57.4 89 36.0
CiPaw.15G091800 Carya illinoinensis HOM05D003171 ORTHO05D000921 3.3e-06 56.6 232 25.9
EL10Ac6g14409 Beta vulgaris HOM05D007209 ORTHO05D000921 4.3e-06 56.2 87 33.3
Hma1.2p1_0979F.1_g243550 Hydrangea macrophylla HOM05D000665 ORTHO05D000140 4.3e-06 56.2 82 34.1
Prupe.8G054800 Prunus persica HOM05D003171 ORTHO05D000921 4.3e-06 56.2 254 24.0
Zm00001eb279690 Zea mays HOM05D007295 ORTHO05D007705 5.7e-06 55.8 264 26.9
FAN11G3401 Fragaria x ananassa HOM05D003171 ORTHO05D000921 7.4e-06 55.5 133 31.6
Zm00001eb015410 Zea mays HOM05D007295 ORTHO05D007705 7.4e-06 55.5 106 28.3
CiPaw.06G117600 Carya illinoinensis HOM05D003171 ORTHO05D000921 9.7e-06 55.1 130 27.7
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 9.7e-06 55.1 90 35.6
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 9.7e-06 55.1 99 33.3


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