Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G2181 Punica granatum HOM05D005304 ORTHO05D004438 2.1e-62 242.3 127 100.0
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 7.4e-12 74.3 111 45.0
Potri.009G003400 Populus trichocarpa HOM05D005304 ORTHO05D004438 9.7e-12 73.9 81 55.6
Manes.04G012000 Manihot esculenta HOM05D005304 ORTHO05D004438 1.3e-11 73.6 98 49.0
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 2.2e-11 72.8 74 58.1
Thecc.09G296200 Theobroma cacao HOM05D005304 ORTHO05D004438 4.8e-11 71.6 73 58.9
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 1.1e-10 70.5 120 41.7
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 5.3e-10 68.2 78 56.4
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 6.9e-10 67.8 78 56.4
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 6.9e-10 67.8 78 56.4
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.2e-09 67.0 77 53.2
Gohir.D07G109600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.2e-09 67.0 56 66.1
RcHm_v2.0_Chr5g0056381 Rosa chinensis HOM05D025255 ORTHO05D004438 2.6e-09 65.9 82 52.4
Gohir.A07G105600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 3.4e-09 65.5 78 55.1
Gorai.001G117700 Gossypium raimondii HOM05D005304 ORTHO05D004438 4.5e-09 65.1 56 64.3
Ciclev10029845m.g Citrus clementina HOM05D005304 ORTHO05D004438 5.9e-09 64.7 110 43.6
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 5.9e-09 64.7 76 46.1
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 7.7e-09 64.3 82 46.3
FvH4_3g30440 Fragaria vesca HOM05D025255 ORTHO05D004438 1.3e-08 63.5 92 46.7
FAN11G2118 Fragaria x ananassa HOM05D025255 ORTHO05D004438 1.3e-08 63.5 107 44.9
PGR119G0321 Punica granatum HOM05D005304 ORTHO05D004438 1.3e-08 63.5 106 47.2
FAN21G1648 Fragaria x ananassa HOM05D025255 ORTHO05D004438 2.9e-08 62.4 93 46.2
FAN16G1536 Fragaria x ananassa HOM05D025255 ORTHO05D004438 5.0e-08 61.6 117 42.7
CiPaw.14G106000 Carya illinoinensis HOM05D005304 ORTHO05D004438 8.5e-08 60.8 107 43.9
CSS0028161 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 1.4e-07 60.1 87 43.7
TWI79G0532 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.4e-07 60.1 118 37.3
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 5.5e-07 58.2 81 43.2
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.2e-06 57.0 59 49.2
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.6e-06 56.6 74 51.4
Eucgr.B03916 Eucalyptus grandis HOM05D005304 ORTHO05D004438 2.7e-06 55.8 118 39.8
Prupe.6G114400 Prunus persica HOM05D005304 ORTHO05D004438 3.6e-06 55.5 102 40.2
MELO3C035553.2 Cucumis melo HOM05D026992 ORTHO05D004438 6.1e-06 54.7 121 42.1
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 6.1e-06 54.7 74 44.6
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 7.9e-06 54.3 77 41.6


User provided reference genes

Program Settings