Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 7.5e-109 397.1 192 100.0
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 2.0e-61 239.6 231 56.7
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.8e-57 224.2 166 63.3
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.8e-57 224.2 166 63.3
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.3e-52 210.3 164 61.0
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 5.0e-52 208.4 164 62.8
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.1e-51 207.2 222 49.5
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.1e-51 207.2 222 49.5
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 7.2e-51 204.5 167 59.9
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.7e-50 202.6 165 59.4
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.9e-50 201.1 167 57.5
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.3e-49 199.5 166 58.4
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.3e-49 199.5 176 56.2
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.5e-48 196.8 166 57.8
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.0e-48 196.4 166 58.4
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.7e-47 193.4 166 57.2
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 1.7e-47 193.4 168 55.4
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 2.8e-47 192.6 167 56.9
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.3e-46 188.3 198 49.5
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.3e-46 188.3 198 49.5
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 9.1e-46 187.6 206 47.6
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 1.3e-44 183.7 142 62.0
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 9.4e-43 177.6 223 42.6
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.1e-42 176.4 222 42.8
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-41 172.6 166 53.6
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 3.0e-41 172.6 166 51.8
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 3.0e-41 172.6 166 51.8
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 3.9e-41 172.2 166 53.0
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 6.7e-41 171.4 166 52.4
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 5.7e-40 168.3 166 50.6
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 9.7e-40 167.5 166 49.4
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-38 164.1 164 50.0
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 5.3e-38 161.8 164 48.8
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 9.1e-38 161.0 159 49.1
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-37 160.6 168 48.8
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-37 160.6 168 48.8
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-37 160.6 168 48.8
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-37 160.6 222 40.5
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 1.6e-37 160.2 166 49.4
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 7.7e-37 157.9 222 40.1
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.0e-36 157.5 164 48.2
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.7e-36 156.8 164 48.2
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 2.2e-36 156.4 221 39.4
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 2.9e-36 156.0 221 39.4
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.8e-36 155.6 164 46.3
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.0e-36 155.2 164 47.6
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.5e-36 154.8 164 47.6
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.5e-36 154.5 164 47.6
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 8.5e-36 154.5 221 38.9
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.1e-35 154.1 197 44.7
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-35 153.7 164 47.6
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 1.5e-35 153.7 164 46.3
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.9e-35 153.3 163 46.0
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.9e-35 153.3 164 47.6
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 1.9e-35 153.3 154 50.0
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.2e-35 152.5 164 45.7
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 7.2e-35 151.4 222 40.5
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 7.2e-35 151.4 222 40.5
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 9.4e-35 151.0 224 42.9
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 2.1e-34 149.8 223 40.4
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.1e-34 149.8 164 46.3
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 6.1e-34 148.3 122 61.5
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 6.1e-34 148.3 165 45.5
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 1.8e-33 146.7 171 46.8
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.0e-33 145.6 212 39.2
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 5.2e-33 145.2 166 44.0
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 1.2e-32 144.1 191 42.9
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 2.0e-32 143.3 221 38.9
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.6e-32 142.9 224 36.2
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 4.4e-32 142.1 175 45.7
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 5.7e-32 141.7 216 39.4
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 5.7e-32 141.7 164 48.8
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 7.5e-32 141.4 140 51.4
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 3.7e-31 139.0 122 58.2
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 8.2e-31 137.9 166 44.0
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.2e-31 137.9 133 49.6
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-30 137.1 182 43.4
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-30 136.3 164 43.3
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 3.1e-30 136.0 165 43.0
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 9.1e-30 134.4 141 48.9
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 2.0e-29 133.3 169 45.0
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.5e-29 132.5 160 44.4
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 3.5e-29 132.5 222 37.8
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 4.5e-29 132.1 168 39.9
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.1e-27 127.5 165 44.2
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 1.1e-27 127.5 173 43.9
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.5e-27 126.3 168 40.5
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 3.2e-27 125.9 169 40.8
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.2e-27 124.8 216 35.2
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 1.6e-26 123.6 226 38.5
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 2.1e-26 123.2 127 50.4
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 3.0e-25 119.4 124 52.4
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.0e-25 119.4 119 52.1
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 5.2e-25 118.6 226 37.6
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-23 114.0 144 44.4
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.2e-23 113.2 219 34.7
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 2.8e-23 112.8 172 40.1
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 3.7e-23 112.5 214 33.6
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 4.8e-23 112.1 134 47.0
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 4.8e-23 112.1 134 47.0
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 7.0e-22 108.2 219 32.9
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.6e-21 107.1 128 49.2
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 2.7e-21 106.3 124 46.8
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 3.5e-21 105.9 203 36.0
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 5.9e-21 105.1 226 33.6
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 2.3e-20 103.2 141 41.8
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 3.8e-20 102.4 168 35.1
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.6e-20 101.7 198 33.3
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.6e-20 101.7 160 38.8
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 1.9e-19 100.1 134 44.0
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.5e-19 99.8 167 38.3
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-18 97.4 135 40.0
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-18 97.4 122 44.3
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 6.1e-18 95.1 165 35.2
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 1.0e-17 94.4 123 46.3
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 1.4e-17 94.0 168 38.7
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 2.3e-17 93.2 164 34.1
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 5.2e-17 92.0 86 50.0
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 3.4e-16 89.4 139 38.1
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.3e-15 85.1 168 35.1
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 4.1e-14 82.4 93 46.2
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 7.0e-14 81.6 93 49.5
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-13 80.9 171 31.0
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 1.6e-13 80.5 143 40.6
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-12 77.4 108 39.8
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 2.3e-12 76.6 71 57.7
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-11 74.3 119 37.8
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 5.6e-11 72.0 83 48.2
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.1e-10 70.1 125 41.6
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 3.6e-10 69.3 81 45.7
Dinv03816 Davidia involucrata HOM05D031496 ORTHO05D029219 1.8e-09 67.0 56 55.4
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 3.7e-07 59.3 110 31.8
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 4.1e-06 55.8 69 43.5


User provided reference genes

Program Settings