Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 1.4e-104 383.3 237 100.0
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 1.2e-60 237.3 212 72.2
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 1.0e-30 137.9 223 46.2
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 5.1e-30 135.6 239 44.4
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 8.6e-30 134.8 235 40.0
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 8.6e-30 134.8 188 49.5
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 1.9e-29 133.7 218 44.5
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 7.3e-29 131.7 215 48.4
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 2.8e-28 129.8 234 43.2
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 3.6e-28 129.4 234 47.4
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 4.7e-28 129.0 234 43.2
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 6.2e-28 128.6 238 39.9
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 1.1e-27 127.9 212 52.4
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 1.8e-27 127.1 236 44.5
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.8e-27 127.1 232 39.2
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 3.1e-27 126.3 244 47.1
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 3.1e-27 126.3 190 50.0
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 6.8e-27 125.2 227 40.1
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 8.9e-27 124.8 240 41.2
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 8.9e-27 124.8 176 47.7
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 8.9e-27 124.8 119 56.3
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 8.9e-27 124.8 223 47.1
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 1.5e-26 124.0 229 45.9
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 1.5e-26 124.0 239 37.7
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 2.0e-26 123.6 229 45.9
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 2.0e-26 123.6 226 40.3
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 2.6e-26 123.2 245 46.9
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 3.4e-26 122.9 152 52.6
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 3.4e-26 122.9 194 46.4
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 4.4e-26 122.5 157 48.4
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 4.4e-26 122.5 230 43.5
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 7.6e-26 121.7 215 45.6
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 7.6e-26 121.7 192 53.6
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 9.9e-26 121.3 200 50.0
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 9.9e-26 121.3 227 40.1
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 1.3e-25 120.9 211 47.4
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 1.7e-25 120.6 248 42.7
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 2.9e-25 119.8 238 46.2
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 3.7e-25 119.4 184 53.8
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 6.4e-25 118.6 228 44.3
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 8.3e-25 118.2 194 54.1
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 8.3e-25 118.2 237 46.4
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 1.1e-24 117.9 244 38.5
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 1.4e-24 117.5 185 45.4
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 1.4e-24 117.5 222 45.0
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 1.4e-24 117.5 220 45.5
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 3.2e-24 116.3 191 41.4
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 3.2e-24 116.3 235 42.1
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 5.4e-24 115.5 193 45.1
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 5.4e-24 115.5 197 47.7
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 5.4e-24 115.5 172 51.7
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 1.2e-23 114.4 152 44.1
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 2.1e-23 113.6 218 40.4
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 2.1e-23 113.6 218 39.4
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 2.7e-23 113.2 202 42.1
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 2.7e-23 113.2 197 47.2
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 2.7e-23 113.2 172 52.3
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 4.6e-23 112.5 170 47.6
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 6.0e-23 112.1 179 50.8
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 7.8e-23 111.7 193 47.7
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 7.8e-23 111.7 155 42.6
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 7.8e-23 111.7 214 45.3
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 1.0e-22 111.3 201 41.3
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 1.3e-22 110.9 221 41.6
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 1.3e-22 110.9 210 42.4
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 1.7e-22 110.5 185 41.6
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 1.7e-22 110.5 226 44.2
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 1.7e-22 110.5 222 46.8
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.7e-22 110.5 176 46.0
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 5.1e-22 109.0 168 53.6
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 5.1e-22 109.0 214 44.9
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 1.1e-21 107.8 180 38.3
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 1.5e-21 107.5 215 40.9
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 1.5e-21 107.5 170 58.8
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 1.5e-21 107.5 117 59.0
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 2.5e-21 106.7 173 44.5
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 5.6e-21 105.5 224 39.7
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 5.6e-21 105.5 199 42.2
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 1.2e-20 104.4 196 38.8
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 1.2e-20 104.4 239 45.2
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 1.6e-20 104.0 202 40.1
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 1.6e-20 104.0 96 58.3
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.1e-20 103.6 110 67.3
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 2.8e-20 103.2 177 54.2
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 4.7e-20 102.4 130 63.8
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 4.7e-20 102.4 151 41.7
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 6.2e-20 102.1 78 64.1
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 6.2e-20 102.1 226 40.3
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 8.1e-20 101.7 227 46.7
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 8.1e-20 101.7 109 53.2
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 1.1e-19 101.3 208 36.1
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 3.1e-19 99.8 211 39.3
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 2.0e-18 97.1 165 45.5
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 2.6e-18 96.7 193 36.3
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 1.7e-17 94.0 217 41.9
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 1.7e-17 94.0 208 35.6
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 2.2e-17 93.6 147 41.5
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 2.2e-17 93.6 220 40.0
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 2.4e-16 90.1 158 44.9
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 6.0e-15 85.5 99 61.6
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 7.8e-15 85.1 79 53.2
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 5.1e-14 82.4 154 47.4
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 3.3e-13 79.7 152 50.7
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 7.3e-13 78.6 148 48.6
PGR042G2066 Punica granatum HOM05D001058 ORTHO05D002277 8.1e-12 75.1 76 59.2
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 2.4e-11 73.6 45 66.7
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 6.9e-11 72.0 233 36.9
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 1.5e-10 70.9 148 37.2
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 7.6e-10 68.6 117 52.1
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 9.9e-10 68.2 197 33.0
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 9.9e-10 68.2 234 27.4
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 1.3e-09 67.8 229 37.6
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 2.9e-09 66.6 96 38.5
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 8.4e-09 65.1 33 90.9
ClCG00G004860 Citrullus lanatus HOM05D005915 ORTHO05D007239 2.1e-07 60.5 83 43.4
Haze_16650 Corylus avellana HOM05D005915 ORTHO05D007239 7.9e-07 58.5 50 56.0
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 1.3e-06 57.8 102 36.3
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 6.6e-06 55.5 138 39.1


User provided reference genes

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