Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 1.8e-198 695.7 344 100.0
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 2.5e-147 525.8 347 72.9
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 2.5e-147 525.8 346 71.7
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 7.3e-147 524.2 347 72.6
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 1.3e-146 523.5 345 73.9
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 6.2e-146 521.2 347 72.9
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.1e-145 520.4 348 71.3
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 1.1e-145 520.4 348 72.1
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 1.4e-145 520.0 347 72.3
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 1.8e-145 519.6 349 72.5
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 2.0e-144 516.2 346 71.7
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 2.0e-144 516.2 343 73.2
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 1.7e-143 513.1 347 70.9
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 2.2e-143 512.7 347 70.9
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 2.2e-143 512.7 345 70.4
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 8.4e-143 510.8 345 70.1
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 8.4e-143 510.8 347 69.7
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 1.4e-142 510.0 377 66.8
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 1.4e-142 510.0 350 71.1
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 2.4e-142 509.2 352 70.2
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 4.2e-142 508.4 344 71.8
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 7.1e-142 507.7 354 68.9
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 7.1e-142 507.7 345 70.1
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 9.3e-142 507.3 349 71.3
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 2.7e-141 505.8 354 68.6
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 6.0e-141 504.6 348 69.3
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 1.3e-140 503.4 329 73.9
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 1.3e-140 503.4 325 73.2
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 1.7e-140 503.1 345 69.3
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 1.7e-140 503.1 344 70.3
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 3.9e-140 501.9 329 72.3
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 3.9e-140 501.9 347 70.3
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 3.9e-140 501.9 306 76.8
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 5.1e-140 501.5 345 69.3
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.1e-139 500.4 351 68.4
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 1.1e-139 500.4 344 69.8
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 1.9e-139 499.6 350 69.1
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 2.5e-139 499.2 347 70.3
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 3.3e-139 498.8 343 69.4
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 7.3e-139 497.7 375 66.1
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 1.3e-138 496.9 346 68.5
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 4.8e-138 495.0 341 70.7
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 4.8e-138 495.0 342 68.7
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 1.4e-137 493.4 352 68.8
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 1.8e-137 493.0 345 67.2
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 5.3e-137 491.5 344 69.2
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 6.9e-137 491.1 317 72.9
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 9.0e-137 490.7 303 77.2
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 1.5e-136 490.0 339 71.4
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 2.0e-136 489.6 307 73.3
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 3.4e-136 488.8 346 66.8
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 3.4e-136 488.8 348 67.0
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 7.6e-136 487.6 339 69.9
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 7.6e-136 487.6 339 69.9
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 1.3e-135 486.9 339 68.4
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 1.3e-135 486.9 347 66.3
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 1.7e-135 486.5 312 74.0
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 2.9e-135 485.7 312 73.4
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 8.4e-135 484.2 305 74.4
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 2.4e-134 482.6 347 66.0
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 2.4e-134 482.6 352 67.6
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 2.4e-134 482.6 320 70.6
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 4.2e-134 481.9 339 69.0
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 4.2e-134 481.9 344 66.0
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 7.1e-134 481.1 339 69.6
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 9.3e-134 480.7 345 68.7
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 4.6e-133 478.4 314 71.3
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 2.3e-132 476.1 350 66.6
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 9.6e-131 470.7 311 71.1
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 1.3e-130 470.3 314 70.1
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 1.8e-129 466.5 307 71.0
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 3.1e-129 465.7 339 66.7
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 4.5e-128 461.8 378 60.6
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 4.9e-127 458.4 344 64.0
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 6.5e-127 458.0 343 64.7
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 8.4e-127 457.6 347 62.5
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 2.5e-126 456.1 351 64.4
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.2e-125 453.8 285 75.8
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 3.5e-125 452.2 347 64.6
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 3.9e-124 448.7 326 66.6
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 8.7e-124 447.6 350 63.1
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 1.1e-123 447.2 299 71.6
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 5.7e-123 444.9 315 67.3
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 1.6e-122 443.4 347 62.0
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 4.8e-122 441.8 312 67.0
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 1.4e-121 440.3 315 67.0
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 2.4e-121 439.5 340 63.2
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 3.1e-121 439.1 345 64.1
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 9.0e-121 437.6 340 62.9
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 2.0e-120 436.4 326 62.6
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 2.0e-120 436.4 292 72.3
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 2.6e-120 436.0 315 65.7
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 4.5e-120 435.3 339 63.4
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 5.8e-120 434.9 340 62.4
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 7.6e-120 434.5 343 60.9
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 1.0e-119 434.1 310 65.5
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 2.2e-119 433.0 320 65.3
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 2.9e-119 432.6 284 74.6
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 3.8e-119 432.2 306 66.7
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 5.0e-119 431.8 310 66.8
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 1.1e-118 430.6 306 66.3
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 4.2e-118 428.7 314 66.9
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 4.2e-118 428.7 279 70.3
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 4.6e-117 425.2 342 61.4
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 6.1e-117 424.9 303 67.3
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 1.0e-116 424.1 307 65.5
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 1.3e-116 423.7 324 63.3
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 1.8e-116 423.3 342 61.1
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 1.8e-116 423.3 342 61.1
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 1.8e-116 423.3 310 64.2
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 1.5e-115 420.2 327 62.4
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 1.9e-115 419.9 343 61.2
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 2.5e-115 419.5 324 63.0
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 6.3e-114 414.8 280 69.6
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.4e-113 413.7 332 59.0
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 7.9e-109 397.9 341 61.6
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 4.8e-106 388.7 282 63.8
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 1.2e-104 384.0 318 60.7
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 2.0e-104 383.3 386 53.1
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 1.7e-103 380.2 263 69.2
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 2.2e-103 379.8 308 61.0
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 1.1e-102 377.5 355 56.9
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 1.6e-101 373.6 251 72.1
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 1.0e-100 370.9 303 57.8
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 3.0e-100 369.4 345 55.9
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 1.1e-99 367.5 345 55.4
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 9.7e-99 364.4 327 53.5
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 8.2e-98 361.3 306 55.2
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 1.8e-97 360.1 347 55.0
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 5.9e-96 355.1 337 53.4
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 1.5e-94 350.5 339 54.3
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 1.6e-93 347.1 305 54.1
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 4.5e-88 328.9 333 49.8
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 3.2e-86 322.8 336 49.1
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 1.6e-85 320.5 235 63.4
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 1.8e-81 307.0 281 55.2
Gohir.D13G040700 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.0e-79 301.2 201 71.1
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 9.4e-78 294.7 318 51.6
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 4.0e-76 289.3 228 62.3
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 6.3e-74 282.0 164 79.3
TAR381G1258 Trochodendron aralioides HOM05D004652 ORTHO05D005634 1.8e-68 263.8 205 63.4
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 1.0e-55 221.5 162 62.3
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 1.0e-55 221.5 162 62.3
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 5.0e-55 219.2 140 72.9
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 1.5e-46 191.0 112 79.5
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 9.5e-46 188.3 118 75.4
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 2.6e-43 180.3 325 32.3
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 2.3e-39 167.2 117 67.5
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 1.1e-38 164.9 312 35.6
MCO15G669 Micromonas commoda HOM05D004652 ORTHO05D005634 8.4e-34 148.7 302 32.8
TAR381G1519 Trochodendron aralioides HOM05D004652 ORTHO05D005634 1.9e-33 147.5 164 50.0
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 1.7e-31 141.0 129 54.3
MCO09G010 Micromonas commoda HOM05D004652 ORTHO05D005634 7.6e-27 125.6 283 33.2
Lalb_Chr09g0323281 Lupinus albus HOM05D004652 ORTHO05D005634 2.4e-25 120.6 173 41.6
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 3.9e-23 113.2 87 63.2
Cc00_g07740 Coffea canephora HOM05D004652 ORTHO05D005634 8.4e-18 95.5 286 26.2
CDE01G0594 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 1.0e-15 88.6 105 41.9


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