Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G1924 Punica granatum HOM05D007144 ORTHO05D008709 9.2e-25 117.5 153 100.0
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 7.6e-11 71.2 58 62.1
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 1.3e-10 70.5 58 60.3
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 4.9e-10 68.6 58 62.1
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 1.4e-09 67.0 58 56.9
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 1.9e-09 66.6 58 56.9
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 1.9e-09 66.6 53 62.3
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 2.4e-09 66.2 55 63.6
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 2.4e-09 66.2 58 60.3
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 3.2e-09 65.9 58 62.1
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 3.2e-09 65.9 58 60.3
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 4.1e-09 65.5 58 58.6
Glyma.08G150200 Glycine max HOM05D007144 ORTHO05D008709 1.2e-08 63.9 55 60.0
Thecc.09G249300 Theobroma cacao HOM05D007144 ORTHO05D008709 1.2e-08 63.9 55 56.4
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 1.6e-08 63.5 58 55.2
MELO3C014563.2 Cucumis melo HOM05D007144 ORTHO05D008709 2.7e-08 62.8 58 56.9
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 2.7e-08 62.8 59 61.0
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 2.7e-08 62.8 51 58.8
CsaV3_6G039020 Cucumis sativus L. HOM05D007144 ORTHO05D008709 3.5e-08 62.4 58 56.9
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 3.5e-08 62.4 58 56.9
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 3.5e-08 62.4 58 56.9
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 4.6e-08 62.0 50 58.0
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 4.6e-08 62.0 58 55.2
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 4.6e-08 62.0 58 56.9
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 4.6e-08 62.0 55 58.2
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 7.8e-08 61.2 59 55.9
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 7.8e-08 61.2 54 61.1
TWI23G1223 Tripterygium wilfordii HOM05D007144 ORTHO05D008709 7.8e-08 61.2 57 56.1
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 7.8e-08 61.2 56 51.8
Sabra09G0053500 Salix brachista HOM05D007144 ORTHO05D008709 1.0e-07 60.8 54 59.3
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 1.3e-07 60.5 45 66.7
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 1.3e-07 60.5 56 60.7
TPR.G13466 Trifolium pratense HOM05D007144 ORTHO05D008709 1.3e-07 60.5 55 56.4
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 1.7e-07 60.1 52 61.5
GSVIVG01037268001 Vitis vinifera HOM05D007144 ORTHO05D008709 1.7e-07 60.1 51 60.8
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 2.3e-07 59.7 45 64.4
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea HOM05D007144 ORTHO05D008709 3.0e-07 59.3 55 56.4
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea HOM05D007144 ORTHO05D008709 3.0e-07 59.3 55 56.4
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 3.0e-07 59.3 58 58.6
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 3.0e-07 59.3 59 52.5
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 3.0e-07 59.3 44 61.4
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 3.0e-07 59.3 44 61.4
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 3.0e-07 59.3 44 61.4
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 3.9e-07 58.9 41 68.3
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 3.9e-07 58.9 55 52.7
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 3.9e-07 58.9 56 58.9
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 3.9e-07 58.9 56 58.9
CiPaw.13G151300 Carya illinoinensis HOM05D007144 ORTHO05D008709 6.6e-07 58.2 55 52.7
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 8.6e-07 57.8 42 66.7
CANSAT54G2482 Cannabis sativa HOM05D007144 ORTHO05D008709 8.6e-07 57.8 58 50.0
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 8.6e-07 57.8 44 59.1
MBI13_g27793_MAGBIO Magnolia biondii HOM05D007144 ORTHO05D008709 8.6e-07 57.8 58 50.0
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 8.6e-07 57.8 57 50.9
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 1.1e-06 57.4 44 65.9
Lalb_Chr18g0054451 Lupinus albus HOM05D007144 ORTHO05D008709 1.1e-06 57.4 49 59.2
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 1.9e-06 56.6 56 51.8
Dinv36172 Davidia involucrata HOM05D007144 ORTHO05D008709 2.5e-06 56.2 57 56.1
QL01p017309 Quercus lobata HOM05D007144 ORTHO05D008709 2.5e-06 56.2 48 56.2
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 2.5e-06 56.2 59 52.5
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea HOM05D007144 ORTHO05D008709 3.3e-06 55.8 55 52.7
Duzib168G0692 Durio zibethinus HOM05D007144 ORTHO05D008709 3.3e-06 55.8 58 53.4
Medtr3g088410 Medicago truncatula HOM05D007144 ORTHO05D008709 3.3e-06 55.8 55 52.7
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 5.6e-06 55.1 45 55.6
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 5.6e-06 55.1 57 54.4
Ca_12164_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 7.3e-06 54.7 57 52.6
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 7.3e-06 54.7 43 60.5
Manes.02G140201 Manihot esculenta HOM05D007144 ORTHO05D008709 7.3e-06 54.7 59 50.8
AUR62006537 Chenopodium quinoa HOM05D007144 ORTHO05D008709 9.6e-06 54.3 41 63.4
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 9.6e-06 54.3 42 59.5


User provided reference genes

Program Settings