Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G1653 Punica granatum HOM05D001337 ORTHO05D001281 2.0e-68 262.3 131 100.0
PGR102G2147 Punica granatum HOM05D001337 ORTHO05D001281 3.1e-21 105.5 184 40.2
PGR031G0077 Punica granatum HOM05D001337 ORTHO05D001281 2.1e-14 82.8 171 35.1
Lj3g0013045 Lotus japonicus HOM05D001337 ORTHO05D001281 1.1e-13 80.5 176 35.8
CSS0038963 Camellia sinensis var. sinensis HOM05D001337 ORTHO05D001281 2.4e-13 79.3 175 32.0
MD17G1197600 Malus domestica HOM05D001337 ORTHO05D001281 5.3e-13 78.2 173 32.9
Ca_01107_v3 Cicer arietinum L. HOM05D001337 ORTHO05D001281 9.0e-13 77.4 177 33.3
Rhsim12G0196300 Rhododendron simsii HOM05D001337 ORTHO05D001281 9.0e-13 77.4 181 32.6
vmacro16943 Vaccinium macrocarpon HOM05D001337 ORTHO05D001281 9.0e-13 77.4 177 32.8
vmacro16944 Vaccinium macrocarpon HOM05D001337 ORTHO05D001281 1.2e-12 77.0 178 32.0
Actinidia01794 Actinidia chinensis HOM05D001337 ORTHO05D001281 1.5e-12 76.6 178 33.1
Phvul.005G172400 Phaseolus vulgaris HOM05D001337 ORTHO05D001281 1.5e-12 76.6 177 33.9
PGR102G2246 Punica granatum HOM05D001337 ORTHO05D001281 1.5e-12 76.6 178 33.7
Eucgr.J03014 Eucalyptus grandis HOM05D001337 ORTHO05D001281 2.0e-12 76.3 178 34.8
Glyma.07G034400 Glycine max HOM05D001337 ORTHO05D001281 2.0e-12 76.3 173 32.9
Eucgr.J03015 Eucalyptus grandis HOM05D001337 ORTHO05D001281 7.6e-12 74.3 175 32.6
Glyma.08G207700 Glycine max HOM05D001337 ORTHO05D001281 1.0e-11 73.9 173 31.8
Medtr2g102370 Medicago truncatula HOM05D001337 ORTHO05D001281 1.0e-11 73.9 177 32.8
PGR102G3265 Punica granatum HOM05D001337 ORTHO05D001281 1.0e-11 73.9 157 37.6
Rhsim12G0196800 Rhododendron simsii HOM05D001337 ORTHO05D001281 1.0e-11 73.9 178 32.0
CSS0041305 Camellia sinensis var. sinensis HOM05D001337 ORTHO05D001281 1.3e-11 73.6 148 37.2
Glyma.15G013300 Glycine max HOM05D001337 ORTHO05D001281 1.3e-11 73.6 177 32.2
Gohir.A10G079200 Gossypium hirsutum HOM05D001337 ORTHO05D001281 1.3e-11 73.6 174 30.5
Prupe.3G073600 Prunus persica HOM05D001337 ORTHO05D001281 1.3e-11 73.6 175 30.3
PGSC0003DMG400002561 Solanum tuberosum HOM05D001337 ORTHO05D001281 1.7e-11 73.2 180 30.6
VMungo1080G0493 Vigna mungo HOM05D001337 ORTHO05D001281 1.7e-11 73.2 177 32.2
Psat1g004480 Pisum sativum HOM05D001337 ORTHO05D001281 2.2e-11 72.8 180 31.7
PGR102G0051 Punica granatum HOM05D001337 ORTHO05D001281 2.2e-11 72.8 177 29.9
Eucgr.J03012 Eucalyptus grandis HOM05D001337 ORTHO05D001281 2.9e-11 72.4 175 30.9
Rhsim08G0218800 Rhododendron simsii HOM05D001337 ORTHO05D001281 2.9e-11 72.4 178 30.3
COL.COLO4_30335 Corchorus olitorius HOM05D001337 ORTHO05D001281 3.8e-11 72.0 174 29.3
Gohir.D10G072300 Gossypium hirsutum HOM05D001337 ORTHO05D001281 3.8e-11 72.0 174 29.3
Gorai.011G077800 Gossypium raimondii HOM05D001337 ORTHO05D001281 3.8e-11 72.0 174 29.3
Ca_20404_v3 Cicer arietinum L. HOM05D001337 ORTHO05D001281 5.0e-11 71.6 176 30.7
Eucgr.J03013 Eucalyptus grandis HOM05D001337 ORTHO05D001281 5.0e-11 71.6 175 32.6
VMungo0331G0514 Vigna mungo HOM05D001337 ORTHO05D001281 5.0e-11 71.6 173 32.4
Ciclev10025956m.g Citrus clementina HOM05D001337 ORTHO05D001281 6.5e-11 71.2 175 30.3
Rhsim12G0196700 Rhododendron simsii HOM05D001337 ORTHO05D001281 6.5e-11 71.2 187 31.6
Rhsim12G0196900 Rhododendron simsii HOM05D001337 ORTHO05D001281 6.5e-11 71.2 178 32.0
CSS0046299 Camellia sinensis var. sinensis HOM05D001337 ORTHO05D001281 8.4e-11 70.9 178 32.0
CSS0046472 Camellia sinensis var. sinensis HOM05D001337 ORTHO05D001281 1.1e-10 70.5 184 31.0
Phvul.010G151500 Phaseolus vulgaris HOM05D001337 ORTHO05D001281 1.1e-10 70.5 173 32.4
ECA232G1581 Erigeron canadensis HOM05D001337 ORTHO05D001281 1.4e-10 70.1 175 29.7
Glyma.13G360600 Glycine max HOM05D001337 ORTHO05D001281 1.4e-10 70.1 178 33.1
BcaC07g41488 Brassica carinata HOM05D001337 ORTHO05D001281 1.9e-10 69.7 175 34.3
C08p44840 Brassica napus HOM05D001337 ORTHO05D001281 1.9e-10 69.7 175 34.3
BolC8t52029H Brassica oleracea HOM05D001337 ORTHO05D001281 1.9e-10 69.7 175 34.3
Lj5C62T9 Lonicera japonica HOM05D001337 ORTHO05D001281 1.9e-10 69.7 180 28.9
Peaxi162Scf00207g00092 Petunia axillaris HOM05D001337 ORTHO05D001281 1.9e-10 69.7 179 31.3
Solyc03g120330.1 Solanum lycopersicum HOM05D001337 ORTHO05D001281 1.9e-10 69.7 183 31.7
Sopen03g039220 Solanum pennellii HOM05D001337 ORTHO05D001281 1.9e-10 69.7 183 31.7
CAN.G438.53 Capsicum annuum HOM05D001337 ORTHO05D001281 2.5e-10 69.3 183 30.6
Nn8g39272 Nelumbo nucifera HOM05D001337 ORTHO05D001281 2.5e-10 69.3 173 30.6
arahy.Tifrunner.gnm1.ann1.5H6YYL Arachis hypogaea HOM05D001337 ORTHO05D001281 4.2e-10 68.6 177 30.5
Nitab4.5_0009131g0030 Nicotiana tabacum HOM05D001337 ORTHO05D001281 4.2e-10 68.6 179 31.3
AT1G80440 Arabidopsis thaliana HOM05D001337 ORTHO05D001281 5.5e-10 68.2 176 31.2
CAN.G395.18 Capsicum annuum HOM05D001337 ORTHO05D001281 5.5e-10 68.2 181 30.9
Duzib235G0651 Durio zibethinus HOM05D001337 ORTHO05D001281 5.5e-10 68.2 177 29.9
Hma1.2p1_0682F.1_g202680 Hydrangea macrophylla HOM05D001337 ORTHO05D001281 5.5e-10 68.2 178 30.3
Thhalv10008027m.g Eutrema salsugineum HOM05D001337 ORTHO05D001281 9.3e-10 67.4 175 34.9
PSO782G4287 Papaver somniferum HOM05D001337 ORTHO05D001281 9.3e-10 67.4 180 30.6
BcaB03g14530 Brassica carinata HOM05D001337 ORTHO05D001281 1.2e-09 67.0 175 34.9
Carub.0002s2714 Capsella rubella HOM05D001337 ORTHO05D001281 1.2e-09 67.0 171 32.7
TAR383G1043 Trochodendron aralioides HOM05D001337 ORTHO05D001281 1.2e-09 67.0 176 30.1
vmacro18931 Vaccinium macrocarpon HOM05D001337 ORTHO05D001281 1.2e-09 67.0 186 28.5
Actinidia01795 Actinidia chinensis HOM05D001337 ORTHO05D001281 1.6e-09 66.6 176 30.1
BcaC05g25642 Brassica carinata HOM05D001337 ORTHO05D001281 1.6e-09 66.6 175 34.3
C05p13820 Brassica napus HOM05D001337 ORTHO05D001281 1.6e-09 66.6 175 33.7
BolC5t30119H Brassica oleracea HOM05D001337 ORTHO05D001281 1.6e-09 66.6 175 33.7
Sp1g13980 Schrenkiella parvula HOM05D001337 ORTHO05D001281 1.6e-09 66.6 175 34.9
Solyc03g120320.1 Solanum lycopersicum HOM05D001337 ORTHO05D001281 1.6e-09 66.6 175 31.4
Thecc.06G083500 Theobroma cacao HOM05D001337 ORTHO05D001281 1.6e-09 66.6 177 29.4
TWI75G1252 Tripterygium wilfordii HOM05D001337 ORTHO05D001281 1.6e-09 66.6 178 30.3
arahy.Tifrunner.gnm1.ann1.ELW4ST Arachis hypogaea HOM05D001337 ORTHO05D001281 2.1e-09 66.2 181 32.0
Cc01_g12350 Coffea canephora HOM05D001337 ORTHO05D001281 2.1e-09 66.2 179 33.0
Peaxi162Scf00015g10032 Petunia axillaris HOM05D001337 ORTHO05D001281 2.1e-09 66.2 179 31.3
Sopen03g039210 Solanum pennellii HOM05D001337 ORTHO05D001281 2.1e-09 66.2 176 32.4
Lj3g0007919 Lotus japonicus HOM05D001337 ORTHO05D001281 2.7e-09 65.9 178 32.0
Nitab4.5_0003885g0100 Nicotiana tabacum HOM05D001337 ORTHO05D001281 2.7e-09 65.9 179 31.3
Psat7g253160 Pisum sativum HOM05D001337 ORTHO05D001281 2.7e-09 65.9 176 32.4
GSVIVG01017545001 Vitis vinifera HOM05D001337 ORTHO05D001281 2.7e-09 65.9 171 29.2
A06p11690 Brassica napus HOM05D001337 ORTHO05D001281 3.5e-09 65.5 175 33.7
BraA06t24346Z Brassica rapa HOM05D001337 ORTHO05D001281 3.5e-09 65.5 175 33.7
CAN.G438.54 Capsicum annuum HOM05D001337 ORTHO05D001281 3.5e-09 65.5 175 29.7
Thhalv10018763m.g Eutrema salsugineum HOM05D001337 ORTHO05D001281 3.5e-09 65.5 178 31.5
Lalb_Chr04g0262601 Lupinus albus HOM05D001337 ORTHO05D001281 4.6e-09 65.1 176 28.4
SalBow2G2593 Salvia bowleyana HOM05D001337 ORTHO05D001281 4.6e-09 65.1 188 30.3
PGSC0003DMG400002562 Solanum tuberosum HOM05D001337 ORTHO05D001281 4.6e-09 65.1 176 31.8
Aa31LG7G310 Aethionema arabicum HOM05D001337 ORTHO05D001281 6.1e-09 64.7 173 31.2
MSTRG.22701 Avicennia marina HOM05D001337 ORTHO05D001281 6.1e-09 64.7 183 29.5
A09p61270 Brassica napus HOM05D001337 ORTHO05D001281 6.1e-09 64.7 175 33.7
BraA09t41499Z Brassica rapa HOM05D001337 ORTHO05D001281 6.1e-09 64.7 175 33.7
CARHR016170 Cardamine hirsuta HOM05D001337 ORTHO05D001281 6.1e-09 64.7 178 30.9
PSO782G0375 Papaver somniferum HOM05D001337 ORTHO05D001281 6.1e-09 64.7 178 29.8
PSO782G2147 Papaver somniferum HOM05D001337 ORTHO05D001281 6.1e-09 64.7 178 29.8
AL2G41060 Arabidopsis lyrata HOM05D001337 ORTHO05D001281 7.9e-09 64.3 173 30.1
Carub.0001s1545 Capsella rubella HOM05D001337 ORTHO05D001281 7.9e-09 64.3 179 30.2
CARHR074810 Cardamine hirsuta HOM05D001337 ORTHO05D001281 7.9e-09 64.3 175 29.1
Dinv38058 Davidia involucrata HOM05D001337 ORTHO05D001281 7.9e-09 64.3 125 37.6
Duzib235G0360 Durio zibethinus HOM05D001337 ORTHO05D001281 7.9e-09 64.3 175 28.6
Lsat_1_v5_gn_4_103441 Lactuca sativa HOM05D001337 ORTHO05D001281 7.9e-09 64.3 175 28.6
Lalb_Chr25g0279621 Lupinus albus HOM05D001337 ORTHO05D001281 7.9e-09 64.3 176 29.5
Medtr4g011900 Medicago truncatula HOM05D001337 ORTHO05D001281 7.9e-09 64.3 176 30.1
vmacro18932 Vaccinium macrocarpon HOM05D001337 ORTHO05D001281 7.9e-09 64.3 87 44.8
Cc04_g03570 Coffea canephora HOM05D001337 ORTHO05D001281 1.0e-08 63.9 175 28.0
Oeu033498.3 Olea europaea HOM05D001337 ORTHO05D001281 1.0e-08 63.9 179 29.1
HanXRQChr09g0275381 Helianthus annuus HOM05D001337 ORTHO05D001281 1.3e-08 63.5 175 28.6
Nitab4.5_0000351g0220 Nicotiana tabacum HOM05D001337 ORTHO05D001281 1.3e-08 63.5 181 29.3
Nitab4.5_0019872g0010 Nicotiana tabacum HOM05D001337 ORTHO05D001281 1.3e-08 63.5 181 29.8
PGR102G0522 Punica granatum HOM05D001337 ORTHO05D001281 1.3e-08 63.5 137 35.0
Duzib192G0513 Durio zibethinus HOM05D001337 ORTHO05D001281 1.8e-08 63.2 174 28.7
GSVIVG01017151001 Vitis vinifera HOM05D001337 ORTHO05D001281 1.8e-08 63.2 178 32.0
BcaB02g08686 Brassica carinata HOM05D001337 ORTHO05D001281 2.3e-08 62.8 175 29.1
CDE07G1861 Ceratophyllum demersum HOM05D001337 ORTHO05D001281 2.3e-08 62.8 177 29.9
Manes.11G052110 Manihot esculenta HOM05D001337 ORTHO05D001281 2.3e-08 62.8 181 29.3
Manes.11G052140 Manihot esculenta HOM05D001337 ORTHO05D001281 2.3e-08 62.8 181 29.3
PGSC0003DMG400016541 Solanum tuberosum HOM05D001337 ORTHO05D001281 2.3e-08 62.8 181 29.8
BcaC05g25511 Brassica carinata HOM05D001337 ORTHO05D001281 3.0e-08 62.4 175 30.3
FAN02G1500 Fragaria x ananassa HOM05D001337 ORTHO05D001281 3.0e-08 62.4 180 28.3
PSO063G6742 Papaver somniferum HOM05D001337 ORTHO05D001281 3.0e-08 62.4 177 29.4
Sp5g35380 Schrenkiella parvula HOM05D001337 ORTHO05D001281 3.0e-08 62.4 178 29.2
PGSC0003DMG400016540 Solanum tuberosum HOM05D001337 ORTHO05D001281 3.0e-08 62.4 181 29.3
TWI12G1350 Tripterygium wilfordii HOM05D001337 ORTHO05D001281 3.0e-08 62.4 178 30.9
AL1G27770 Arabidopsis lyrata HOM05D001337 ORTHO05D001281 3.9e-08 62.0 177 31.1
AT1G15670 Arabidopsis thaliana HOM05D001337 ORTHO05D001281 3.9e-08 62.0 179 30.7
FAN09G1740 Fragaria x ananassa HOM05D001337 ORTHO05D001281 3.9e-08 62.0 179 26.3
Solyc06g066770.1 Solanum lycopersicum HOM05D001337 ORTHO05D001281 3.9e-08 62.0 181 29.8
Sopen06g025050 Solanum pennellii HOM05D001337 ORTHO05D001281 3.9e-08 62.0 181 29.8
Aa31LG4G700 Aethionema arabicum HOM05D001337 ORTHO05D001281 5.1e-08 61.6 176 30.1
Cpa.g.sc10.160 Carica papaya HOM05D001337 ORTHO05D001281 5.1e-08 61.6 175 29.1
Gohir.A10G079100 Gossypium hirsutum HOM05D001337 ORTHO05D001281 5.1e-08 61.6 177 28.8
PSO782G0637 Papaver somniferum HOM05D001337 ORTHO05D001281 5.1e-08 61.6 178 29.2
THA.LOC104812470 Tarenaya hassleriana HOM05D001337 ORTHO05D001281 5.1e-08 61.6 180 30.0
TWI18G1451 Tripterygium wilfordii HOM05D001337 ORTHO05D001281 5.1e-08 61.6 178 29.2
Cfa002051 Carpinus fangiana HOM05D001337 ORTHO05D001281 6.7e-08 61.2 177 27.7
Nn2g11833 Nelumbo nucifera HOM05D001337 ORTHO05D001281 6.7e-08 61.2 173 28.9
Nitab4.5_0006801g0010 Nicotiana tabacum HOM05D001337 ORTHO05D001281 6.7e-08 61.2 179 27.9
PGSC0003DMG400016542 Solanum tuberosum HOM05D001337 ORTHO05D001281 6.7e-08 61.2 181 29.8
CiPaw.01G240500 Carya illinoinensis HOM05D001337 ORTHO05D001281 8.7e-08 60.8 177 30.5
Haze_16455 Corylus avellana HOM05D001337 ORTHO05D001281 8.7e-08 60.8 177 32.8
HanXRQChr16g0501041 Helianthus annuus HOM05D001337 ORTHO05D001281 8.7e-08 60.8 65 50.8
PSO063G1872 Papaver somniferum HOM05D001337 ORTHO05D001281 8.7e-08 60.8 177 30.5
BolC6t40422H Brassica oleracea HOM05D001337 ORTHO05D001281 1.1e-07 60.5 175 30.3
CiPaw.01G240600 Carya illinoinensis HOM05D001337 ORTHO05D001281 1.1e-07 60.5 177 30.5
Sabra01G0148300 Salix brachista HOM05D001337 ORTHO05D001281 1.1e-07 60.5 176 30.7
THA.LOC104808205 Tarenaya hassleriana HOM05D001337 ORTHO05D001281 1.1e-07 60.5 178 29.8
EL10Ac9g21985 Beta vulgaris HOM05D001337 ORTHO05D001281 1.5e-07 60.1 180 31.7
Gohir.D10G072400 Gossypium hirsutum HOM05D001337 ORTHO05D001281 1.5e-07 60.1 177 28.2
Gorai.011G078000 Gossypium raimondii HOM05D001337 ORTHO05D001281 1.5e-07 60.1 177 28.2
FvH4_6g30930 Fragaria vesca HOM05D001337 ORTHO05D001281 1.9e-07 59.7 180 27.2
FAN14G1283 Fragaria x ananassa HOM05D001337 ORTHO05D001281 1.9e-07 59.7 180 27.2
Manes.04G121600 Manihot esculenta HOM05D001337 ORTHO05D001281 1.9e-07 59.7 178 29.8
PSO782G4344 Papaver somniferum HOM05D001337 ORTHO05D001281 1.9e-07 59.7 104 40.4
BraA07t32029Z Brassica rapa HOM05D001337 ORTHO05D001281 2.5e-07 59.3 178 30.3
Potri.001G178300 Populus trichocarpa HOM05D001337 ORTHO05D001281 2.5e-07 59.3 176 30.7
A07p45250 Brassica napus HOM05D001337 ORTHO05D001281 3.3e-07 58.9 175 30.9
MBI04_g26640_MAGBIO Magnolia biondii HOM05D001337 ORTHO05D001281 5.7e-07 58.2 172 26.7
PSO063G0541 Papaver somniferum HOM05D001337 ORTHO05D001281 5.7e-07 58.2 104 39.4
Thecc.06G083400 Theobroma cacao HOM05D001337 ORTHO05D001281 5.7e-07 58.2 181 29.3
PSO063G3894 Papaver somniferum HOM05D001337 ORTHO05D001281 7.4e-07 57.8 99 42.4
RcHm_v2.0_Chr2g0137541 Rosa chinensis HOM05D001337 ORTHO05D001281 7.4e-07 57.8 85 42.4
Nitab4.5_0008606g0040 Nicotiana tabacum HOM05D001337 ORTHO05D001281 9.7e-07 57.4 104 40.4
PSO063G0190 Papaver somniferum HOM05D001337 ORTHO05D001281 9.7e-07 57.4 93 38.7
arahy.Tifrunner.gnm1.ann1.4F68EX Arachis hypogaea HOM05D001337 ORTHO05D001281 1.6e-06 56.6 108 38.0
BcaC08g47589 Brassica carinata HOM05D001337 ORTHO05D001281 1.6e-06 56.6 175 28.6
C06p54090 Brassica napus HOM05D001337 ORTHO05D001281 1.6e-06 56.6 175 28.6
CDE06G1862 Ceratophyllum demersum HOM05D001337 ORTHO05D001281 1.6e-06 56.6 155 30.3
FAN05G2458 Fragaria x ananassa HOM05D001337 ORTHO05D001281 1.6e-06 56.6 171 29.8
FAN14G1072 Fragaria x ananassa HOM05D001337 ORTHO05D001281 1.6e-06 56.6 175 29.1
Nitab4.5_0013554g0010 Nicotiana tabacum HOM05D001337 ORTHO05D001281 1.6e-06 56.6 101 41.6
GSVIVG01017147001 Vitis vinifera HOM05D001337 ORTHO05D001281 1.6e-06 56.6 175 31.4
COL.COLO4_30334 Corchorus olitorius HOM05D001337 ORTHO05D001281 2.2e-06 56.2 180 30.6
DCAR_026307 Daucus carota HOM05D001337 ORTHO05D001281 2.2e-06 56.2 175 26.9
FvH4_6g30950 Fragaria vesca HOM05D001337 ORTHO05D001281 4.8e-06 55.1 175 28.6
Os02g0208700 Oryza sativa ssp. japonica HOM05D001337 ORTHO05D001281 4.8e-06 55.1 124 33.9
Rhsim08G0218900 Rhododendron simsii HOM05D001337 ORTHO05D001281 6.3e-06 54.7 188 25.0
Actinidia14366 Actinidia chinensis HOM05D001337 ORTHO05D001281 8.2e-06 54.3 85 40.0


User provided reference genes

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