Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G1605 Punica granatum HOM05D007581 ORTHO05D009250 3.6e-38 161.8 130 100.0
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 2.2e-11 72.8 107 61.7
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 1.4e-10 70.1 107 57.9
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 2.4e-10 69.3 107 60.7
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 3.2e-10 68.9 111 67.6
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 4.2e-10 68.6 107 70.1
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 4.2e-10 68.6 107 70.1
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 4.2e-10 68.6 98 72.4
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 4.2e-10 68.6 123 68.3
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 5.4e-10 68.2 104 68.3
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 1.6e-09 66.6 107 72.0
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 4.6e-09 65.1 106 77.4
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 7.8e-09 64.3 102 69.6
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 7.8e-09 64.3 105 73.3
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 7.8e-09 64.3 100 70.0
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 1.0e-08 63.9 105 62.9
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 1.3e-08 63.5 107 77.6
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 1.3e-08 63.5 110 60.9
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 3.0e-08 62.4 98 77.6
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 3.0e-08 62.4 102 61.8
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 5.1e-08 61.6 105 64.8
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 6.6e-08 61.2 100 72.0
QL09p000872 Quercus lobata HOM05D007581 ORTHO05D009250 6.6e-08 61.2 98 76.5
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 8.7e-08 60.8 102 56.9
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 8.7e-08 60.8 107 71.0
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 1.1e-07 60.5 107 56.1
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 1.1e-07 60.5 101 65.3
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 1.5e-07 60.1 100 70.0
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 1.5e-07 60.1 103 69.9
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 1.9e-07 59.7 99 70.7
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 1.9e-07 59.7 99 70.7
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 3.3e-07 58.9 106 63.2
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 4.3e-07 58.5 113 61.9
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 4.3e-07 58.5 106 60.4
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 7.3e-07 57.8 108 50.9
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 9.6e-07 57.4 105 62.9
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 1.6e-06 56.6 105 77.1
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 2.1e-06 56.2 119 52.1
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 2.8e-06 55.8 99 63.6
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 3.6e-06 55.5 106 55.7
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 4.8e-06 55.1 103 67.0
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 4.8e-06 55.1 111 66.7
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 4.8e-06 55.1 92 78.3
CDE02G2090 Ceratophyllum demersum HOM05D002859 ORTHO05D003120 6.2e-06 54.7 92 84.8
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 6.2e-06 54.7 92 78.3
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 8.1e-06 54.3 100 77.0


User provided reference genes

Program Settings