Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 1.0e-58 229.9 122 100.0
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 9.6e-25 117.1 122 57.4
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 1.6e-24 116.3 120 54.2
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 6.2e-24 114.4 122 55.7
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 2.4e-23 112.5 85 65.9
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 6.9e-23 110.9 128 51.6
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 9.0e-23 110.5 105 56.2
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 9.0e-23 110.5 88 67.0
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 2.6e-22 109.0 121 49.6
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 3.4e-22 108.6 89 59.6
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 4.4e-22 108.2 122 50.8
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 5.8e-22 107.8 88 60.2
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 7.6e-22 107.5 88 60.2
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 7.6e-22 107.5 88 60.2
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 9.9e-22 107.1 88 59.1
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 9.9e-22 107.1 88 63.6
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 9.9e-22 107.1 89 61.8
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 9.9e-22 107.1 120 50.8
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 1.3e-21 106.7 88 63.6
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 2.9e-21 105.5 100 58.0
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 2.9e-21 105.5 85 60.0
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 2.9e-21 105.5 125 52.0
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 3.8e-21 105.1 90 60.0
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 3.8e-21 105.1 112 53.6
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 4.9e-21 104.8 88 63.6
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 6.4e-21 104.4 85 63.5
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 1.1e-20 103.6 106 53.8
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 1.4e-20 103.2 85 64.7
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 5.4e-20 101.3 122 47.5
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 5.4e-20 101.3 124 45.2
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 1.2e-19 100.1 96 53.1
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 1.6e-19 99.8 85 58.8
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 2.1e-19 99.4 86 61.6
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 2.7e-19 99.0 64 76.6
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 3.5e-19 98.6 105 47.6
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 3.5e-19 98.6 90 55.6
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 4.6e-19 98.2 93 52.7
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 4.6e-19 98.2 83 57.8
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 4.6e-19 98.2 80 60.0
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 4.6e-19 98.2 88 56.8
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 7.9e-19 97.4 95 52.6
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 7.9e-19 97.4 83 60.2
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 1.3e-18 96.7 85 57.6
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 1.7e-18 96.3 83 59.0
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 1.7e-18 96.3 83 59.0
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 1.7e-18 96.3 121 43.8
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 1.7e-18 96.3 83 59.0
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 1.7e-18 96.3 125 51.2
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 1.7e-18 96.3 124 43.5
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 2.3e-18 95.9 95 51.6
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 2.3e-18 95.9 121 43.8
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 3.9e-18 95.1 117 47.9
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 5.1e-18 94.7 83 57.8
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 5.1e-18 94.7 83 57.8
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 6.6e-18 94.4 88 59.1
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 6.6e-18 94.4 99 47.5
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 6.6e-18 94.4 83 59.0
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 6.6e-18 94.4 94 55.3
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 8.7e-18 94.0 92 55.4
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 1.5e-17 93.2 119 43.7
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 1.5e-17 93.2 134 47.8
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 1.9e-17 92.8 108 52.8
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 1.9e-17 92.8 82 53.7
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 1.9e-17 92.8 105 48.6
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 3.3e-17 92.0 85 49.4
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 3.3e-17 92.0 85 49.4
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 4.3e-17 91.7 85 57.6
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 4.3e-17 91.7 85 57.6
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 4.3e-17 91.7 85 57.6
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 7.3e-17 90.9 85 50.6
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 9.6e-17 90.5 79 58.2
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 9.6e-17 90.5 76 64.5
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 1.6e-16 89.7 86 54.7
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 2.8e-16 89.0 120 44.2
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 2.8e-16 89.0 85 49.4
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 6.2e-16 87.8 49 85.7
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 6.2e-16 87.8 96 50.0
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 8.1e-16 87.4 73 58.9
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 1.1e-15 87.0 74 55.4
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 1.8e-15 86.3 85 54.1
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 1.8e-15 86.3 83 53.0
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 1.8e-15 86.3 117 45.3
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 1.8e-15 86.3 79 54.4
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 1.8e-15 86.3 65 63.1
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 1.5e-14 83.2 58 63.8
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 1.5e-14 83.2 65 56.9
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 2.6e-14 82.4 71 56.3
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 7.6e-14 80.9 82 48.8
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 7.6e-14 80.9 89 53.9
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 9.9e-14 80.5 62 59.7
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 1.7e-13 79.7 49 77.6
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 1.2e-11 73.6 81 46.9
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 2.8e-08 62.4 56 50.0
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 8.1e-08 60.8 52 51.9
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 8.1e-08 60.8 88 38.6
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 7.6e-06 54.3 48 52.1


User provided reference genes

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