Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G1467 Punica granatum HOM05D005672 ORTHO05D003038 1.2e-67 259.6 123 100.0
PGR031G0360 Punica granatum HOM05D005672 ORTHO05D003038 9.0e-31 137.1 129 60.5
PGR031G3744 Punica granatum HOM05D005672 ORTHO05D003038 9.0e-31 137.1 129 60.5
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 3.0e-26 122.1 122 48.4
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 8.7e-26 120.6 116 50.9
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.1e-25 120.2 122 48.4
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 4.3e-25 118.2 118 49.2
PGR031G0657 Punica granatum HOM05D005672 ORTHO05D003038 3.7e-24 115.2 129 53.5
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 2.0e-22 109.4 123 42.3
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 2.6e-22 109.0 115 46.1
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 5.9e-22 107.8 109 48.6
Thecc.06G054500 Theobroma cacao HOM05D005672 ORTHO05D003038 5.9e-22 107.8 112 48.2
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 1.3e-21 106.7 120 43.3
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 1.7e-21 106.3 120 43.3
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 6.5e-21 104.4 123 43.1
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 1.4e-20 103.2 115 47.8
MD17G1196900 Malus domestica HOM05D005672 ORTHO05D003038 1.9e-20 102.8 112 44.6
Prupe.3G072900 Prunus persica HOM05D005672 ORTHO05D003038 1.9e-20 102.8 115 46.1
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 1.9e-20 102.8 123 44.7
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 2.5e-20 102.4 115 47.0
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 2.5e-20 102.4 115 47.0
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 3.2e-20 102.1 112 44.6
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 7.2e-20 100.9 112 43.8
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 1.6e-19 99.8 120 40.8
Eucgr.J03009 Eucalyptus grandis HOM05D005672 ORTHO05D003038 2.3e-18 95.9 122 43.4
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 6.7e-18 94.4 118 41.5
Duzib235G0754 Durio zibethinus HOM05D005672 ORTHO05D003038 1.9e-17 92.8 130 37.7
vmacro18924 Vaccinium macrocarpon HOM05D005672 ORTHO05D003038 1.9e-17 92.8 126 41.3
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 2.5e-17 92.4 117 38.5
Atru.chr1.3245 Acer truncatum HOM05D005672 ORTHO05D003038 7.4e-17 90.9 115 44.3
COL.COLO4_30353 Corchorus olitorius HOM05D005672 ORTHO05D003038 9.7e-17 90.5 81 53.1
CsaV3_7G033060 Cucumis sativus L. HOM05D005672 ORTHO05D003038 9.7e-17 90.5 120 42.5
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 9.7e-17 90.5 115 35.7
ClCG09G002270 Citrullus lanatus HOM05D005672 ORTHO05D003038 1.7e-16 89.7 120 41.7
Gorai.006G099200 Gossypium raimondii HOM05D005672 ORTHO05D003038 4.8e-16 88.2 111 41.4
Gohir.D09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 6.3e-16 87.8 111 41.4
Duzib192G0991 Durio zibethinus HOM05D005672 ORTHO05D003038 1.1e-15 87.0 117 37.6
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 1.4e-15 86.7 103 46.6
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 1.8e-15 86.3 114 39.5
Lsat_1_v5_gn_5_129980 Lactuca sativa HOM05D005672 ORTHO05D003038 1.8e-15 86.3 116 36.2
Duzib192G0281 Durio zibethinus HOM05D005672 ORTHO05D003038 4.1e-15 85.1 115 40.9
Sed0001381 Sechium edule HOM05D005672 ORTHO05D003038 5.3e-15 84.7 117 41.9
ClCG09G002230 Citrullus lanatus HOM05D005672 ORTHO05D003038 9.1e-15 84.0 118 40.7
Manes.04G121900 Manihot esculenta HOM05D005672 ORTHO05D003038 1.2e-14 83.6 121 38.8
Manes.04G122000 Manihot esculenta HOM05D005672 ORTHO05D003038 1.2e-14 83.6 121 38.8
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 1.2e-14 83.6 116 38.8
Gohir.A09G083700 Gossypium hirsutum HOM05D005672 ORTHO05D003038 1.5e-14 83.2 95 42.1
FvH4_6g30990 Fragaria vesca HOM05D005672 ORTHO05D003038 4.5e-14 81.6 115 38.3
Manes.04G122100 Manihot esculenta HOM05D005672 ORTHO05D003038 5.9e-14 81.3 121 38.8
Prupe.3G072700 Prunus persica HOM05D005672 ORTHO05D003038 5.9e-14 81.3 116 37.9
Gohir.A09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 1.3e-13 80.1 119 34.5
Gohir.D09G083500 Gossypium hirsutum HOM05D005672 ORTHO05D003038 1.7e-13 79.7 119 33.6
SalBow2G2205 Salvia bowleyana HOM05D005672 ORTHO05D003038 1.7e-13 79.7 119 35.3
unitig_21.g20351 Utricularia gibba HOM05D005672 ORTHO05D003038 1.7e-13 79.7 119 31.9
Gorai.006G099100 Gossypium raimondii HOM05D005672 ORTHO05D003038 2.2e-13 79.3 119 33.6
HanXRQChr10g0314951 Helianthus annuus HOM05D005672 ORTHO05D003038 3.8e-13 78.6 121 33.1
Dinv30519 Davidia involucrata HOM05D005672 ORTHO05D003038 6.5e-13 77.8 98 40.8
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 6.5e-13 77.8 89 38.2
Nn8g39246 Nelumbo nucifera HOM05D005672 ORTHO05D003038 8.5e-13 77.4 80 42.5
DCAR_016224 Daucus carota HOM05D005672 ORTHO05D003038 1.4e-12 76.6 110 36.4
HanXRQChr14g0455911 Helianthus annuus HOM05D005672 ORTHO05D003038 2.5e-12 75.9 123 34.1
Sed0008395 Sechium edule HOM05D005672 ORTHO05D003038 5.5e-12 74.7 117 35.9
THA.LOC104823573 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 9.4e-12 73.9 117 35.0
Atru.chr1.3244 Acer truncatum HOM05D005672 ORTHO05D003038 1.6e-11 73.2 106 42.5
Duzib235G0878 Durio zibethinus HOM05D005672 ORTHO05D003038 2.7e-11 72.4 113 38.1
MELO3C023361.2 Cucumis melo HOM05D005672 ORTHO05D003038 3.6e-11 72.0 105 39.0
Nn8g39245 Nelumbo nucifera HOM05D005672 ORTHO05D003038 3.6e-11 72.0 119 35.3
Ciclev10027446m.g Citrus clementina HOM05D005672 ORTHO05D003038 4.7e-11 71.6 121 34.7
Ciclev10027568m.g Citrus clementina HOM05D005672 ORTHO05D003038 1.4e-10 70.1 120 33.3
Nn8g39240 Nelumbo nucifera HOM05D005672 ORTHO05D003038 1.4e-10 70.1 110 38.2
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 6.7e-10 67.8 126 32.5
Nn2g11778 Nelumbo nucifera HOM05D005672 ORTHO05D003038 8.8e-10 67.4 115 35.7
Ciclev10026803m.g Citrus clementina HOM05D005672 ORTHO05D003038 1.5e-09 66.6 123 37.4
MELO3C023363.2 Cucumis melo HOM05D005672 ORTHO05D003038 1.5e-09 66.6 128 35.2
Nn8g39244 Nelumbo nucifera HOM05D005672 ORTHO05D003038 1.5e-09 66.6 116 37.1
Duzib235G1402 Durio zibethinus HOM05D005672 ORTHO05D003038 2.6e-09 65.9 42 61.9
Dinv30521 Davidia involucrata HOM05D005672 ORTHO05D003038 3.3e-09 65.5 114 34.2
MD09G1214600 Malus domestica HOM05D005672 ORTHO05D003038 4.4e-09 65.1 110 37.3
Sed0004804 Sechium edule HOM05D005672 ORTHO05D003038 9.7e-09 63.9 92 33.7
Ciclev10027058m.g Citrus clementina HOM05D005672 ORTHO05D003038 1.3e-08 63.5 91 45.1
BcaC01g02807 Brassica carinata HOM05D007482 ORTHO05D003038 6.3e-08 61.2 117 38.5
CSS0026145 Camellia sinensis var. sinensis HOM05D005672 ORTHO05D003038 8.2e-08 60.8 70 40.0
SGA_v2.0_scaffold5G02600 Striga asiatica HOM05D005672 ORTHO05D003038 1.1e-07 60.5 89 37.1
BraA07t29995Z Brassica rapa HOM05D017967 ORTHO05D003038 1.4e-07 60.1 121 32.2
BraA09t41720Z Brassica rapa HOM05D007482 ORTHO05D003038 1.4e-07 60.1 124 36.3
MELO3C030573.2 Cucumis melo HOM05D005672 ORTHO05D003038 1.8e-07 59.7 113 32.7
BolC8t52260H Brassica oleracea HOM05D007482 ORTHO05D003038 2.4e-07 59.3 126 31.0
Ciclev10026944m.g Citrus clementina HOM05D005672 ORTHO05D003038 2.4e-07 59.3 42 57.1
CiPaw.02G152000 Carya illinoinensis HOM05D005672 ORTHO05D003038 3.1e-07 58.9 117 29.9
Prupe.3G073200 Prunus persica HOM05D005672 ORTHO05D003038 3.1e-07 58.9 116 33.6
PSO339G2623 Papaver somniferum HOM05D007482 ORTHO05D003038 4.1e-07 58.5 114 35.1
C08p47210 Brassica napus HOM05D007482 ORTHO05D003038 5.3e-07 58.2 123 30.9
ClCG09G002220 Citrullus lanatus HOM05D005672 ORTHO05D003038 5.3e-07 58.2 97 33.0
ClCG09G002260 Citrullus lanatus HOM05D005672 ORTHO05D003038 5.3e-07 58.2 86 37.2
Nn8g39243 Nelumbo nucifera HOM05D005672 ORTHO05D003038 5.3e-07 58.2 74 40.5
Sed0004960 Sechium edule HOM05D005672 ORTHO05D003038 5.3e-07 58.2 122 32.8
MELO3C023360.2 Cucumis melo HOM05D005672 ORTHO05D003038 7.0e-07 57.8 90 36.7
Thhalv10017433m.g Eutrema salsugineum HOM05D007482 ORTHO05D016827 7.0e-07 57.8 118 29.7
Nn8g39241 Nelumbo nucifera HOM05D005672 ORTHO05D003038 7.0e-07 57.8 97 35.1
CARHR035990 Cardamine hirsuta HOM05D007482 ORTHO05D003038 9.1e-07 57.4 119 32.8
Aqoxy4G01164 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.2e-06 57.0 121 32.2
PSO339G0096 Papaver somniferum HOM05D007482 ORTHO05D003038 2.0e-06 56.2 114 35.1
PSO782G2157 Papaver somniferum HOM05D005672 ORTHO05D003038 2.0e-06 56.2 124 29.8
Aqoxy7G01810 Aquilegia oxysepala HOM05D005672 ORTHO05D003038 2.6e-06 55.8 116 30.2
Nn8g39242 Nelumbo nucifera HOM05D005672 ORTHO05D003038 3.4e-06 55.5 73 41.1
CsaV3_7G033040 Cucumis sativus L. HOM05D005672 ORTHO05D003038 7.7e-06 54.3 118 33.1


User provided reference genes

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