Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G1412 Punica granatum HOM05D005230 ORTHO05D006506 7.9e-179 630.6 374 100.0
Eucgr.B03758 Eucalyptus grandis HOM05D005230 ORTHO05D006506 5.2e-146 521.5 462 70.8
CiPaw.13G147000 Carya illinoinensis HOM05D005230 ORTHO05D006506 1.8e-143 513.1 460 70.0
CSS0035138 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 5.9e-142 508.1 461 69.2
CSS0009799 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 7.7e-142 507.7 461 69.0
Nn7g36961 Nelumbo nucifera HOM05D005230 ORTHO05D006506 2.5e-140 502.7 464 67.7
Rhsim13G0231000 Rhododendron simsii HOM05D005230 ORTHO05D006506 1.6e-139 500.0 459 68.6
Dinv29329 Davidia involucrata HOM05D005230 ORTHO05D006506 2.7e-139 499.2 461 68.8
Actinidia16258 Actinidia chinensis HOM05D005230 ORTHO05D006506 6.1e-139 498.0 459 69.3
Ciclev10015197m.g Citrus clementina HOM05D005230 ORTHO05D006506 6.1e-139 498.0 457 69.4
Actinidia06848 Actinidia chinensis HOM05D005230 ORTHO05D006506 1.0e-138 497.3 459 69.1
CANSAT54G1170 Cannabis sativa HOM05D005230 ORTHO05D006506 1.8e-138 496.5 461 67.7
Manes.05G199900 Manihot esculenta HOM05D005230 ORTHO05D006506 2.3e-138 496.1 462 67.1
Prupe.4G269500 Prunus persica HOM05D005230 ORTHO05D006506 4.0e-138 495.4 462 68.0
TWI75G0256 Tripterygium wilfordii HOM05D005230 ORTHO05D006506 2.0e-137 493.0 461 65.3
QL01p016185 Quercus lobata HOM05D005230 ORTHO05D006506 2.6e-137 492.7 459 68.2
Sopen11g029740 Solanum pennellii HOM05D005230 ORTHO05D006506 4.4e-137 491.9 460 67.0
CAN.G280.6 Capsicum annuum HOM05D005230 ORTHO05D006506 9.8e-137 490.7 460 66.1
PGSC0003DMG400027416 Solanum tuberosum HOM05D005230 ORTHO05D006506 1.3e-136 490.3 460 66.7
GSVIVG01020254001 Vitis vinifera HOM05D005230 ORTHO05D006506 1.3e-136 490.3 462 67.3
Solyc11g072090.2 Solanum lycopersicum HOM05D005230 ORTHO05D006506 1.7e-136 490.0 460 66.7
MD03G1163000 Malus domestica HOM05D005230 ORTHO05D006506 2.8e-136 489.2 461 67.5
Cpa.g.sc34.203 Carica papaya HOM05D005230 ORTHO05D006506 4.8e-136 488.4 461 67.2
Haze_23295 Corylus avellana HOM05D005230 ORTHO05D006506 6.3e-136 488.0 461 67.9
Oeu025950.1 Olea europaea HOM05D005230 ORTHO05D006506 1.1e-135 487.3 459 65.8
Aqoxy1G00076 Aquilegia oxysepala HOM05D005230 ORTHO05D006506 7.0e-135 484.6 463 65.2
Potri.001G271800 Populus trichocarpa HOM05D005230 ORTHO05D006506 2.0e-134 483.0 458 64.2
TWI31G0483 Tripterygium wilfordii HOM05D005230 ORTHO05D006506 3.5e-134 482.3 461 65.5
TPR.G24369 Trifolium pratense HOM05D005230 ORTHO05D006506 4.5e-134 481.9 458 65.7
Atru.chr3.2845 Acer truncatum HOM05D005230 ORTHO05D006506 7.7e-134 481.1 464 59.3
Potri.009G066400 Populus trichocarpa HOM05D005230 ORTHO05D006506 7.7e-134 481.1 458 63.3
Sabra16G0167000 Salix brachista HOM05D005230 ORTHO05D006506 1.3e-133 480.3 458 64.0
Cc01_g07300 Coffea canephora HOM05D005230 ORTHO05D006506 1.7e-133 479.9 461 65.7
Lj4g0004497 Lotus japonicus HOM05D005230 ORTHO05D006506 1.9e-132 476.5 461 64.9
Manes.01G177100 Manihot esculenta HOM05D005230 ORTHO05D006506 1.9e-132 476.5 463 65.2
Psat7g073480 Pisum sativum HOM05D005230 ORTHO05D006506 3.3e-132 475.7 459 64.9
Thecc.09G252100 Theobroma cacao HOM05D005230 ORTHO05D006506 3.3e-132 475.7 462 65.6
Phvul.002G235800 Phaseolus vulgaris HOM05D005230 ORTHO05D006506 5.5e-132 474.9 459 66.2
Ca_17953_v3 Cicer arietinum L. HOM05D005230 ORTHO05D006506 7.2e-132 474.6 459 67.1
MSTRG.21320 Avicennia marina HOM05D005230 ORTHO05D006506 9.5e-132 474.2 459 64.5
Glyma.08G113500 Glycine max HOM05D005230 ORTHO05D006506 1.2e-131 473.8 459 66.0
arahy.Tifrunner.gnm1.ann1.554KFZ Arachis hypogaea HOM05D005230 ORTHO05D006506 2.1e-131 473.0 458 59.2
arahy.Tifrunner.gnm1.ann1.YWPQ0A Arachis hypogaea HOM05D005230 ORTHO05D006506 2.1e-131 473.0 458 59.2
COL.COLO4_33253 Corchorus olitorius HOM05D005230 ORTHO05D006506 2.8e-131 472.6 462 64.7
VMungo0251G0349 Vigna mungo HOM05D005230 ORTHO05D006506 4.7e-131 471.9 460 66.3
Cfa009930 Carpinus fangiana HOM05D005230 ORTHO05D006506 1.4e-130 470.3 439 68.8
Migut.D00707 Erythranthe guttata HOM05D005230 ORTHO05D006506 1.4e-130 470.3 465 63.2
Lalb_Chr07g0186541 Lupinus albus HOM05D005230 ORTHO05D006506 2.3e-130 469.5 459 65.4
THA.LOC104811208 Tarenaya hassleriana HOM05D005230 ORTHO05D006506 2.3e-130 469.5 457 65.4
DCAR_031608 Daucus carota HOM05D005230 ORTHO05D006506 4.0e-130 468.8 461 63.8
Glyma.05G155700 Glycine max HOM05D005230 ORTHO05D006506 5.2e-130 468.4 459 65.6
Hund07409 Selenicereus undatus HOM05D005230 ORTHO05D006506 8.9e-130 467.6 466 64.4
Sabra09G0049500 Salix brachista HOM05D005230 ORTHO05D006506 2.6e-129 466.1 458 62.7
Duzib168G0825 Durio zibethinus HOM05D005230 ORTHO05D006506 4.4e-129 465.3 461 64.2
Aa31LG1G8850 Aethionema arabicum HOM05D005230 ORTHO05D006506 1.3e-128 463.8 458 62.7
Sed0024170 Sechium edule HOM05D005230 ORTHO05D006506 1.3e-128 463.8 461 64.6
Medtr8g085640 Medicago truncatula HOM05D005230 ORTHO05D006506 2.2e-128 463.0 454 64.8
Peaxi162Scf00978g00317 Petunia axillaris HOM05D005230 ORTHO05D006506 2.2e-128 463.0 461 63.8
Oeu032061.2 Olea europaea HOM05D005230 ORTHO05D006506 3.7e-128 462.2 492 61.8
CsaV3_1G041930 Cucumis sativus L. HOM05D005230 ORTHO05D006506 4.9e-128 461.8 462 64.3
Lsat_1_v5_gn_2_32160 Lactuca sativa HOM05D005230 ORTHO05D006506 6.3e-128 461.5 459 64.5
ATR0307G025 Amborella trichopoda HOM05D005230 ORTHO05D006506 8.3e-128 461.1 460 63.5
ClCG03G014290 Citrullus lanatus HOM05D005230 ORTHO05D006506 1.1e-127 460.7 462 63.9
MELO3C015608.2 Cucumis melo HOM05D005230 ORTHO05D006506 1.4e-127 460.3 462 64.5
FvH4_1g25390 Fragaria vesca HOM05D005230 ORTHO05D006506 3.1e-127 459.1 462 63.2
Duzib150G1312 Durio zibethinus HOM05D005230 ORTHO05D006506 5.4e-127 458.4 462 63.6
FAN28G1729 Fragaria x ananassa HOM05D005230 ORTHO05D006506 5.4e-127 458.4 462 63.0
AUR62006575 Chenopodium quinoa HOM05D005230 ORTHO05D006506 7.0e-127 458.0 464 65.5
AUR62000229 Chenopodium quinoa HOM05D005230 ORTHO05D006506 1.2e-126 457.2 464 65.3
SGA_v2.0_scaffold29G12151 Striga asiatica HOM05D005230 ORTHO05D006506 1.6e-126 456.8 461 60.7
ECA238G4724 Erigeron canadensis HOM05D005230 ORTHO05D006506 2.7e-126 456.1 459 63.2
FAN23G0348 Fragaria x ananassa HOM05D005230 ORTHO05D006506 4.5e-126 455.3 462 62.8
PSO339G0973 Papaver somniferum HOM05D005230 ORTHO05D006506 5.9e-126 454.9 456 63.8
PSO384G0943 Papaver somniferum HOM05D005230 ORTHO05D006506 7.8e-126 454.5 456 63.8
A02p05570 Brassica napus HOM05D005230 ORTHO05D006506 1.0e-125 454.1 449 64.1
Haze_23300 Corylus avellana HOM05D005230 ORTHO05D006506 1.3e-125 453.8 502 54.4
RcHm_v2.0_Chr2g0123421 Rosa chinensis HOM05D005230 ORTHO05D006506 2.3e-125 453.0 462 62.8
BNapus_Darmor_BZH_scaffold_38p02380 Brassica napus HOM05D005230 ORTHO05D006506 5.0e-125 451.8 449 63.9
A10p20220 Brassica napus HOM05D005230 ORTHO05D006506 1.1e-124 450.7 456 62.3
BolC2t06957H Brassica oleracea HOM05D005230 ORTHO05D006506 3.3e-124 449.1 449 63.7
BraA02t05508Z Brassica rapa HOM05D005230 ORTHO05D006506 4.3e-124 448.7 449 63.5
BraA10t44093Z Brassica rapa HOM05D005230 ORTHO05D006506 4.3e-124 448.7 461 61.6
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 7.3e-124 448.0 461 62.0
HanXRQChr13g0402151 Helianthus annuus HOM05D005230 ORTHO05D006506 8.0e-123 444.5 457 62.4
SalBow6G0054 Salvia bowleyana HOM05D005230 ORTHO05D006506 3.4e-121 439.1 482 58.7
Carub.0006s1783 Capsella rubella HOM05D005230 ORTHO05D006506 2.9e-120 436.0 456 62.1
CARHR193430 Cardamine hirsuta HOM05D005230 ORTHO05D006506 1.4e-119 433.7 382 60.5
Thhalv10013503m.g Eutrema salsugineum HOM05D005230 ORTHO05D006506 1.4e-119 433.7 384 60.9
HPP92_016891 Vanilla planifolia HOM05D005230 ORTHO05D006506 1.4e-119 433.7 436 63.5
AL6G30990 Arabidopsis lyrata HOM05D005230 ORTHO05D006506 2.4e-119 433.0 384 60.7
Nitab4.5_0002161g0080 Nicotiana tabacum HOM05D005230 ORTHO05D006506 7.0e-119 431.4 461 61.8
AT5G19485 Arabidopsis thaliana HOM05D005230 ORTHO05D006506 9.2e-119 431.0 384 60.4
Os06g0338900 Oryza sativa ssp. japonica HOM05D005230 ORTHO05D006506 3.5e-118 429.1 451 60.5
Sp6g24920 Schrenkiella parvula HOM05D005230 ORTHO05D006506 4.6e-118 428.7 382 60.7
Lj2C810G6 Lonicera japonica HOM05D005230 ORTHO05D006506 2.3e-117 426.4 463 59.8
MBI13_g00890_MAGBIO Magnolia biondii HOM05D005230 ORTHO05D006506 3.6e-115 419.1 461 53.8
Gohir.A08G009200 Gossypium hirsutum HOM05D005230 ORTHO05D006506 5.2e-114 415.2 462 60.4
Gohir.D08G019200 Gossypium hirsutum HOM05D005230 ORTHO05D006506 5.2e-114 415.2 462 59.7
Gorai.004G013700 Gossypium raimondii HOM05D005230 ORTHO05D006506 6.8e-114 414.8 462 59.7
CDE08G0498 Ceratophyllum demersum HOM05D005230 ORTHO05D006506 1.5e-113 413.7 462 51.7
FAN26G2809 Fragaria x ananassa HOM05D005230 ORTHO05D006506 5.8e-113 411.8 551 53.7
Gorai.006G123300 Gossypium raimondii HOM05D005230 ORTHO05D006506 5.8e-113 411.8 462 60.0
EL10Ac4g10073 Beta vulgaris HOM05D005230 ORTHO05D006506 1.7e-112 410.2 465 52.9
Gohir.D09G105900 Gossypium hirsutum HOM05D005230 ORTHO05D006506 3.7e-112 409.1 462 60.0
SEGI_36393 Sequoiadendron giganteum HOM05D005230 ORTHO05D006506 8.3e-112 407.9 458 58.5
Gohir.A09G109300 Gossypium hirsutum HOM05D005230 ORTHO05D006506 3.0e-109 399.4 462 58.2
Ah.06g194900 Amaranthus hybridus HOM05D005230 ORTHO05D006506 1.2e-105 387.5 462 56.3
unitig_0.g309 Utricularia gibba HOM05D005230 ORTHO05D006506 4.9e-104 382.1 458 54.8
Mapoly0070s0045 Marchantia polymorpha HOM05D005230 ORTHO05D006506 1.3e-96 357.5 457 50.5
GSVIVG01002283001 Vitis vinifera HOM05D005230 ORTHO05D006506 3.8e-96 355.9 401 60.8
vmacro04223 Vaccinium macrocarpon HOM05D005230 ORTHO05D006506 8.4e-96 354.8 495 53.5
SMO117G0151 Selaginella moellendorffii HOM05D005230 ORTHO05D006506 2.3e-93 346.7 412 55.1
Pp3c16_600 Physcomitrium patens HOM05D005230 ORTHO05D006506 8.7e-93 344.7 451 51.9
Zm00001eb051600 Zea mays HOM05D005230 ORTHO05D006506 2.1e-91 340.1 357 55.2
Nitab4.5_0002567g0160 Nicotiana tabacum HOM05D005230 ORTHO05D006506 6.2e-91 338.6 461 46.9
Sc16g0010870 Simmondsia chinensis HOM05D005230 ORTHO05D006506 2.2e-88 330.1 390 59.0
TAR628G1140 Trochodendron aralioides HOM05D005230 ORTHO05D006506 1.9e-71 273.9 292 55.1
Mapoly0050s0011 Marchantia polymorpha HOM05D005230 ORTHO05D006506 5.5e-63 245.7 358 41.6
Mapoly0050s0012 Marchantia polymorpha HOM05D005230 ORTHO05D006506 3.7e-59 233.0 241 54.4
BolC9t58535H Brassica oleracea HOM05D005230 ORTHO05D006506 1.0e-56 224.9 189 68.3
Dinv24610 Davidia involucrata HOM05D005230 ORTHO05D006506 2.1e-54 217.2 225 57.8
CBR_g54067 Chara braunii HOM05D005230 ORTHO05D006506 2.8e-51 206.8 436 41.3
Duzib150G0729 Durio zibethinus HOM05D005230 ORTHO05D006506 7.2e-47 192.2 162 64.8
CSS0018745 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 5.7e-44 182.6 120 79.2
Gohir.A05G264150 Gossypium hirsutum HOM05D005230 ORTHO05D006506 1.7e-43 181.0 123 74.8
C09p56810 Brassica napus HOM05D005230 ORTHO05D006506 6.3e-43 179.1 286 52.4
Cre03.g207825 Chlamydomonas reinhardtii HOM05D005230 ORTHO05D006506 3.2e-39 166.8 258 40.3
FvH4_4g06340 Fragaria vesca HOM05D005230 ORTHO05D006506 6.3e-35 152.5 121 70.2
MCO03G336 Micromonas commoda HOM05D005230 ORTHO05D006506 4.0e-29 133.3 391 27.9
BcaC04g24210 Brassica carinata HOM05D005230 ORTHO05D006506 1.6e-22 111.3 68 85.3
Mapoly0070s0046 Marchantia polymorpha HOM05D005230 ORTHO05D006506 8.0e-22 109.0 131 58.8
PRCOL_00006600 Prasinoderma coloniale HOM05D005230 ORTHO05D006506 3.0e-21 107.1 245 32.7
VMungo1309G2461 Vigna mungo HOM05D002467 ORTHO05D013374 3.1e-18 97.1 77 71.4
Nn7g36957 Nelumbo nucifera HOM05D005230 ORTHO05D006506 7.0e-18 95.9 55 90.9
Sed0001059 Sechium edule HOM05D005230 ORTHO05D006506 3.8e-16 90.1 61 73.8
Psat0s3158g0040 Pisum sativum HOM05D005230 ORTHO05D320643 3.4e-12 77.0 60 63.3
Dinv24611 Davidia involucrata HOM05D005230 ORTHO05D006506 1.3e-11 75.1 49 85.7
TAR623G0477 Trochodendron aralioides HOM05D005230 ORTHO05D006506 1.1e-10 72.0 97 49.5
Psat0s472g0120 Pisum sativum HOM05D005230 ORTHO05D023087 1.8e-10 71.2 74 54.1
VMungo1383G0996 Vigna mungo HOM05D002467 ORTHO05D013374 1.8e-10 71.2 57 66.7
PRCOL_00001177 Prasinoderma coloniale HOM05D004145 ORTHO05D004879 4.1e-10 70.1 359 22.6
Psat4g142680 Pisum sativum HOM05D000493 ORTHO05D001638 5.4e-10 69.7 60 58.3
Psat2g028360 Pisum sativum HOM05D005230 ORTHO05D006506 7.0e-10 69.3 58 62.1
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 7.0e-10 69.3 138 38.4
Psat4g142760 Pisum sativum HOM05D000493 ORTHO05D004446 9.2e-10 68.9 70 50.0
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 7.8e-09 65.9 46 69.6
FAN20G3151 Fragaria x ananassa HOM05D004145 ORTHO05D004879 1.5e-07 61.6 311 21.2
Psat2g003760 Pisum sativum HOM05D005230 ORTHO05D006506 4.3e-07 60.1 39 79.5
Cre12.g502200 Chlamydomonas reinhardtii HOM05D004145 ORTHO05D004879 1.2e-06 58.5 238 26.1
Psat5g186320 Pisum sativum HOM05D000280 ORTHO05D004446 2.1e-06 57.8 160 33.1
Mapoly0056s0115 Marchantia polymorpha HOM05D004145 ORTHO05D004879 2.8e-06 57.4 266 25.2
AagrBONN_evm.TU.Sc2ySwM_228.295 Anthoceros agrestis HOM05D004145 ORTHO05D004879 3.6e-06 57.0 255 25.5
SMO356G0330 Selaginella moellendorffii HOM05D004145 ORTHO05D004879 3.6e-06 57.0 263 22.1
Pp3c1_20030 Physcomitrium patens HOM05D004145 ORTHO05D004879 6.1e-06 56.2 261 24.1
MELO3C033360.2 Cucumis melo HOM05D005230 ORTHO05D013374 8.0e-06 55.8 56 53.6


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