Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 1.2e-200 703.0 354 100.0
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 1.4e-121 440.3 286 74.5
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 1.2e-112 410.6 282 69.5
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 1.2e-112 410.6 282 69.1
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 2.1e-112 409.8 283 69.3
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 2.7e-112 409.5 283 67.5
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 7.9e-112 407.9 283 71.0
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 7.9e-112 407.9 283 69.3
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 2.3e-111 406.4 283 70.7
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 3.0e-111 406.0 285 70.5
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 8.7e-111 404.4 282 68.8
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 1.1e-110 404.1 285 68.1
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 4.3e-110 402.1 282 67.4
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 5.6e-110 401.7 282 67.0
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 9.6e-110 401.0 283 67.1
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 1.6e-109 400.2 282 68.4
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.6e-109 400.2 282 67.0
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 2.8e-109 399.4 250 73.6
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 3.7e-109 399.1 240 75.0
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 3.7e-109 399.1 282 68.4
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 8.2e-109 397.9 284 66.9
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 8.2e-109 397.9 261 68.6
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 1.4e-108 397.1 289 68.5
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 1.4e-108 397.1 247 74.1
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 1.4e-108 397.1 252 71.8
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 2.4e-108 396.4 291 66.7
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 3.1e-108 396.0 277 68.2
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 4.0e-108 395.6 284 67.6
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 4.0e-108 395.6 285 67.0
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 6.9e-108 394.8 277 67.5
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 1.5e-107 393.7 284 67.6
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.5e-107 393.7 277 69.0
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 2.0e-107 393.3 261 68.2
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 2.0e-107 393.3 281 69.0
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 3.4e-107 392.5 286 67.1
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 4.5e-107 392.1 253 71.9
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 7.6e-107 391.3 288 67.0
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 7.6e-107 391.3 272 68.0
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 7.6e-107 391.3 284 66.5
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 1.0e-106 391.0 257 71.2
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 1.0e-106 391.0 309 63.1
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 1.7e-106 390.2 268 67.2
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 2.2e-106 389.8 229 76.4
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 2.2e-106 389.8 229 76.4
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 2.2e-106 389.8 229 76.4
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 2.2e-106 389.8 229 76.4
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 2.2e-106 389.8 278 66.9
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 2.9e-106 389.4 257 70.4
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 3.8e-106 389.0 284 65.8
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 3.8e-106 389.0 256 70.3
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 4.9e-106 388.7 283 66.1
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 1.1e-105 387.5 286 66.8
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 1.1e-105 387.5 288 65.3
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 1.4e-105 387.1 276 68.5
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 1.9e-105 386.7 244 74.6
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 3.2e-105 386.0 231 75.8
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 5.5e-105 385.2 229 76.0
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 5.5e-105 385.2 269 68.0
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 7.1e-105 384.8 283 66.8
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 7.1e-105 384.8 256 68.4
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.2e-104 384.0 281 65.1
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 1.2e-104 384.0 257 70.4
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 1.2e-104 384.0 279 67.4
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 1.2e-104 384.0 257 69.6
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 2.1e-104 383.3 229 76.0
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 2.7e-104 382.9 257 70.8
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 6.0e-104 381.7 282 66.0
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 6.0e-104 381.7 288 65.6
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 7.9e-104 381.3 284 64.1
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 1.0e-103 380.9 257 69.3
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 1.0e-103 380.9 288 66.0
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 1.0e-103 380.9 283 65.0
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 1.3e-103 380.6 257 69.6
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 1.3e-103 380.6 257 69.6
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 1.3e-103 380.6 285 66.0
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 2.3e-103 379.8 254 70.1
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 6.7e-103 378.3 256 69.9
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 1.5e-102 377.1 313 58.8
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 3.3e-102 375.9 266 66.2
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 3.3e-102 375.9 205 79.5
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 4.3e-102 375.6 285 64.9
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 7.4e-102 374.8 277 64.3
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 7.4e-102 374.8 244 70.9
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 4.8e-101 372.1 267 66.7
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 1.1e-100 370.9 257 67.7
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 3.1e-100 369.4 276 64.1
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 3.1e-100 369.4 306 60.8
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 4.1e-100 369.0 284 61.3
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 5.3e-100 368.6 281 63.7
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 2.0e-99 366.7 316 57.9
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 3.4e-99 365.9 282 63.8
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 3.4e-99 365.9 280 62.9
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 1.3e-98 364.0 205 76.6
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 1.1e-97 360.9 252 65.1
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 2.7e-96 356.3 249 66.7
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 3.3e-94 349.4 237 68.4
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 7.4e-94 348.2 255 65.1
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 7.4e-94 348.2 269 62.1
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 8.2e-93 344.7 191 79.1
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 4.5e-91 339.0 266 60.9
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 4.7e-88 328.9 211 68.2
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 3.3e-86 322.8 209 69.9
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 2.6e-83 313.2 228 65.4
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 1.3e-82 310.8 282 57.1
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 3.9e-79 299.3 243 55.1
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.7e-77 293.9 207 71.0
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 8.5e-74 281.6 262 51.1
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 9.4e-73 278.1 209 65.6
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 2.1e-72 276.9 211 64.5
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 2.1e-72 276.9 289 46.4
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 1.0e-71 274.6 271 49.8
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 4.0e-71 272.7 249 52.6
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 2.7e-67 260.0 210 54.8
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 3.8e-66 256.1 148 79.1
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 5.9e-59 232.3 224 53.1
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.8e-58 229.6 245 45.7
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 1.4e-55 221.1 173 58.4
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 4.3e-49 199.5 255 43.9
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 3.6e-48 196.4 177 56.5
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 3.4e-46 189.9 173 52.6
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 2.3e-39 167.2 152 59.2
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 1.9e-25 120.9 88 65.9
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 1.6e-24 117.9 135 48.1
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 1.9e-17 94.4 56 73.2
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 7.1e-12 75.9 37 83.8


User provided reference genes

Program Settings